Cow genome map
Conread name: | Ova1-OVRM10106F05 |
Conread position: | 1-165 |
Cow position: | chr18:2886966-2887134 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 1-171 |
Cow position: | chr18:54044648-54044822 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 140 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 1-202 |
Cow position: | chr18:29236867-29236660 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 147 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 71, 96 |
Conread position: | 1-222 |
Cow position: | chr18:53785891-53785663 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 177 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 97, 12 |
Conread position: | 1-264 |
Cow position: | chr18:6869202-6869474 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 252 |
Conread position: | 1-264 |
Cow position: | chr18:43201112-43200846 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 94 |
Conread position: | 1-363 |
Cow position: | chr18:17992508-17992880 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 49 |
Conread position: | 1-365 |
Cow position: | chr18:51258032-51257662 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 102 |
Conread position: | 1-368 |
Cow position: | chr18:1521183-1520804 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 12 |
Conread position: | 1-372 |
Cow position: | chr18:2019631-2020009 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 243 |
Conread position: | 1-372 |
Cow position: | chr18:47719529-47719897 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 65 |
Conread position: | 1-381 |
Cow position: | chr18:18897551-18897176 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 243 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 98, 76 |
Conread position: | 1-389 |
Cow position: | chr18:29900364-29899982 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 250 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 87, 63 |
Conread position: | 1-390 |
Cow position: | chr18:23944320-23944717 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 23 |
Conread position: | 1-411 |
Cow position: | chr18:37599474-37599897 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 280 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 98, 267 |
Conread position: | 1-507 |
Cow position: | chr18:29070306-29069800 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 316 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 54, 120 |
Conread position: | 1-603 |
Cow position: | chr18:16176557-16177169 (view UCSC Genome Browser custom track) |
Alignm length: | 624 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 26 |
Conread position: | 1-613 |
Cow position: | chr18:33358922-33358309 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 387 |
Conread position: | 1-613 |
Cow position: | chr18:43146871-43147478 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 395 |
Conread position: | 1-615 |
Cow position: | chr18:9186712-9187329 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 375 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 72, 210 |
Conread position: | 1-626 |
Cow position: | chr18:32293823-32293211 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 48 |
Conread position: | 2-260 |
Cow position: | chr18:16534032-16533768 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 201 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 70, 11 |
Conread position: | 2-650 |
Cow position: | chr18:39748632-39747994 (view UCSC Genome Browser custom track) |
Alignm length: | 665 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 330 |
Conread position: | 3-282 |
Cow position: | chr18:51689679-51689390 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 175 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 69, 232 |
Conread position: | 3-351 |
Cow position: | chr18:27987080-27986722 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 115 |
Conread position: | 3-362 |
Cow position: | chr18:40478440-40478067 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 302 |
Conread position: | 3-374 |
Cow position: | chr18:22602540-22602157 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 285 |
Conread position: | 3-390 |
Cow position: | chr18:48221930-48221533 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 233 |
Conread position: | 3-395 |
Cow position: | chr18:51310633-51310237 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 129 |
Conread position: | 3-405 |
Cow position: | chr18:54171792-54172204 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 272 |
Conread position: | 3-419 |
Cow position: | chr18:33953515-33953941 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 229 |
Conread position: | 3-422 |
Cow position: | chr18:14416029-14415606 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 390 |
Conread position: | 3-446 |
Cow position: | chr18:19352438-19351972 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 232 |
Conread position: | 3-446 |
Cow position: | chr18:44621812-44621352 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 3-463 |
Cow position: | chr18:47742071-47741595 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 3-463 |
Cow position: | chr18:55088872-55089347 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 3-602 |
Cow position: | chr18:41840772-41841380 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 439 |
Conread position: | 3-603 |
Cow position: | chr18:28973850-28974453 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 230 |
Conread position: | 3-603 |
Cow position: | chr18:36508386-36507776 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 439 |
Conread position: | 3-613 |
Cow position: | chr18:11275053-11275678 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 120 |
Conread position: | 3-613 |
Cow position: | chr18:16078752-16078109 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 371 |
Conread position: | 3-613 |
Cow position: | chr18:16659952-16660575 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 114 |
Conread position: | 3-613 |
Cow position: | chr18:33335920-33335299 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 26 |
Conread position: | 3-613 |
Cow position: | chr18:37505116-37504500 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 273 |
Conread position: | 3-614 |
Cow position: | chr18:23797700-23797082 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 137 |
Conread position: | 3-614 |
Cow position: | chr18:54024306-54024933 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 73 |
Conread position: | 3-708 |
Cow position: | chr18:45958736-45958037 (view UCSC Genome Browser custom track) |
Alignm length: | 721 |
Alignm identity: | 489 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 129 |
Conread position: | 4-443 |
Cow position: | chr18:51660469-51660024 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 269 |
Conread position: | 4-534 |
Cow position: | chr18:51480890-51480358 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 409 |
Conread position: | 10-163 |
Cow position: | chr18:22869801-22869644 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 15-352 |
Cow position: | chr18:32652036-32651688 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 41-337 |
Cow position: | chr18:19539860-19540163 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 218 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 35, 254 |
Conread position: | 43-375 |
Cow position: | chr18:33268855-33268513 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 284 |
Conread position: | 43-447 |
Cow position: | chr18:37585651-37586070 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 43-608 |
Cow position: | chr18:25350052-25349480 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 70 |
Conread position: | 43-635 |
Cow position: | chr18:35335502-35334909 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 69 |
Conread position: | 48-299 |
Cow position: | chr18:51464469-51464726 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 182 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 48-299 |
Cow position: | chr18:51610997-51610751 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 177 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 28, 115 |
Conread position: | 59-603 |
Cow position: | chr18:27838306-27838852 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 277 |
Conread position: | 155-454 |
Cow position: | chr18:54002384-54002090 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 205 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 252, 136 |
Conread position: | 156-710 |
Cow position: | chr18:35288139-35287609 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 80 |
Conread position: | 160-592 |
Cow position: | chr18:14130178-14129747 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 364, 159 |
Conread position: | 189-521 |
Cow position: | chr18:42244700-42245014 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 226 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 42, 74 |
Conread position: | 214-613 |
Cow position: | chr18:29236609-29236202 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 352 |
Conread position: | 230-446 |
Cow position: | chr18:23746158-23746378 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 150 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 157, 0 |
Conread position: | 238-368 |
Cow position: | chr18:53785283-53785156 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 250-706 |
Cow position: | chr18:29763280-29762822 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 38 |
Conread position: | 259-365 |
Cow position: | chr18:54044999-54044892 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 87 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 272-710 |
Cow position: | chr18:43200566-43200129 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 107 |
Conread position: | 333-626 |
Cow position: | chr18:17993022-17993322 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 173 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 85, 161 |
Conread position: | 354-626 |
Cow position: | chr18:30198374-30198093 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 193 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 53, 169 |
Conread position: | 360-706 |
Cow position: | chr18:16876930-16876604 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 236 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 156, 54 |
Conread position: | 421-626 |
Cow position: | chr18:2020260-2020469 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 147 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 50, 57 |
Conread position: | 427-708 |
Cow position: | chr18:18897187-18896901 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 192 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 115, 11 |
Conread position: | 478-712 |
Cow position: | chr18:2887437-2887671 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 169 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 499-708 |
Cow position: | chr18:42072546-42072760 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 152 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 32, 183 |
Show alignments to all cow chromosomes.