Cow genome map


           Conread name:
           Ova1-OVRM10106F05
        

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               78, 96
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               71, 205
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 85
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 137
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 319
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 246
               

               Conread position:
               1-390
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 203
               

               Conread position:
               1-599
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 122
               

               Conread position:
               1-611
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 168
               

               Conread position:
               1-613
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 13
               

               Conread position:
               1-616
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 192
               

               Conread position:
               1-635
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 26
               

               Conread position:
               2-407
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 231
               

               Conread position:
               2-507
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               334
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               74, 33
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 15
               

               Conread position:
               3-168
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               94, 71
               

               Conread position:
               3-293
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 169
               

               Conread position:
               3-352
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-367
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 115
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 35
               

               Conread position:
               3-410
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-442
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 448
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 272
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 265
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 216
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 194
               

               Conread position:
               3-467
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 395
               

               Conread position:
               3-609
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 94
               

               Conread position:
               3-609
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 437
               

               Conread position:
               3-609
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 394
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 15
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               3-614
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 443
               

               Conread position:
               3-620
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 108
               

               Conread position:
               3-626
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 308
               

               Conread position:
               3-629
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 197
               

               Conread position:
               3-629
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 385
               

               Conread position:
               3-630
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 47
               

               Conread position:
               3-633
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               3-707
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 157
               

               Conread position:
               13-463
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 243
               

               Conread position:
               40-463
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               288
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               36, 164
               

               Conread position:
               42-484
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               312
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               43-613
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               393
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               33, 212
               

               Conread position:
               47-599
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               380
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               9, 114
               

               Conread position:
               48-490
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               36, 105
               

               Conread position:
               66-699
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 218
               

               Conread position:
               71-395
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 184
               

               Conread position:
               89-412
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 61
               

               Conread position:
               95-372
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               69, 221
               

               Conread position:
               151-390
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               11, 162
               

               Conread position:
               157-670
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 82
               

               Conread position:
               163-677
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 69
               

               Conread position:
               170-603
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               354, 108
               

               Conread position:
               198-348
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               208-613
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 140
               

               Conread position:
               214-599
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               228-630
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               289, 34
               

               Conread position:
               272-480
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               132, 8
               

               Conread position:
               275-696
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 112
               

               Conread position:
               340-667
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               196, 48
               

               Conread position:
               349-700
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               43, 52
               

               Conread position:
               361-610
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               456-675
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               82, 132
               

               Conread position:
               457-613
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 58
               

               Conread position:
               527-708
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 0
               
Show alignments to all cow chromosomes.