Cow genome map

Conread name: Ova1-OVRM10106F05

Conread position: 1-162
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 131

Conread position: 1-194
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 1-221
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 1-226
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 71, 131

Conread position: 1-228
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 32

Conread position: 1-231
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 235

Conread position: 1-240
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 1-335
Cow position:
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 98

Conread position: 1-365
Cow position:
Alignm length: 374
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 111

Conread position: 1-367
Cow position:
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 129

Conread position: 1-372
Cow position:
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 37

Conread position: 1-383
Cow position:
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 135

Conread position: 1-384
Cow position:
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-390
Cow position:
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 363

Conread position: 1-393
Cow position:
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 167

Conread position: 1-407
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-411
Cow position:
Alignm length: 424
Alignm identity: 272
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 76

Conread position: 1-411
Cow position:
Alignm length: 415
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 167

Conread position: 1-538
Cow position:
Alignm length: 551
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 381

Conread position: 1-564
Cow position:
Alignm length: 583
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 428

Conread position: 1-611
Cow position:
Alignm length: 629
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 208

Conread position: 1-613
Cow position:
Alignm length: 655
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 271

Conread position: 1-613
Cow position:
Alignm length: 627
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 23

Conread position: 1-622
Cow position:
Alignm length: 647
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 90

Conread position: 1-626
Cow position:
Alignm length: 637
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 369

Conread position: 1-626
Cow position:
Alignm length: 646
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 130

Conread position: 1-630
Cow position:
Alignm length: 649
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 380

Conread position: 1-681
Cow position:
Alignm length: 697
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 1-706
Cow position:
Alignm length: 713
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 123

Conread position: 1-708
Cow position:
Alignm length: 724
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 79

Conread position: 1-708
Cow position:
Alignm length: 729
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 109

Conread position: 1-708
Cow position:
Alignm length: 731
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 80

Conread position: 2-358
Cow position:
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 86

Conread position: 2-372
Cow position:
Alignm length: 382
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 2-447
Cow position:
Alignm length: 457
Alignm identity: 298
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 162, 241

Conread position: 2-613
Cow position:
Alignm length: 628
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 96

Conread position: 2-707
Cow position:
Alignm length: 714
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 23

Conread position: 3-168
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 3-222
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 3-350
Cow position:
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 260

Conread position: 3-351
Cow position:
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 94

Conread position: 3-381
Cow position:
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 352

Conread position: 3-404
Cow position:
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-405
Cow position:
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 329

Conread position: 3-405
Cow position:
Alignm length: 414
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 114

Conread position: 3-410
Cow position:
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 415

Conread position: 3-412
Cow position:
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 413

Conread position: 3-442
Cow position:
Alignm length: 463
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 146

Conread position: 3-446
Cow position:
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 268

Conread position: 3-446
Cow position:
Alignm length: 462
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-446
Cow position:
Alignm length: 462
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-446
Cow position:
Alignm length: 459
Alignm identity: 312
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 73, 269

Conread position: 3-446
Cow position:
Alignm length: 459
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-446
Cow position:
Alignm length: 456
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 15

Conread position: 3-446
Cow position:
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 227

Conread position: 3-446
Cow position:
Alignm length: 460
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 270

Conread position: 3-446
Cow position:
Alignm length: 456
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 256

Conread position: 3-446
Cow position:
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 207

Conread position: 3-446
Cow position:
Alignm length: 460
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 3-446
Cow position:
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-447
Cow position:
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 256

Conread position: 3-463
Cow position:
Alignm length: 486
Alignm identity: 314
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 73, 255

Conread position: 3-463
Cow position:
Alignm length: 475
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 230

Conread position: 3-463
Cow position:
Alignm length: 478
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 401

Conread position: 3-463
Cow position:
Alignm length: 477
Alignm identity: 317
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 73, 10

Conread position: 3-474
Cow position:
Alignm length: 484
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 368

Conread position: 3-505
Cow position:
Alignm length: 517
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 146

Conread position: 3-534
Cow position:
Alignm length: 536
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 37

Conread position: 3-534
Cow position:
Alignm length: 544
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 439

Conread position: 3-599
Cow position:
Alignm length: 617
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 119

Conread position: 3-599
Cow position:
Alignm length: 606
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 18

Conread position: 3-599
Cow position:
Alignm length: 616
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 73

Conread position: 3-601
Cow position:
Alignm length: 616
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 100

Conread position: 3-603
Cow position:
Alignm length: 615
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 94

Conread position: 3-603
Cow position:
Alignm length: 627
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 186

Conread position: 3-603
Cow position:
Alignm length: 619
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 440

Conread position: 3-603
Cow position:
Alignm length: 617
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 437

Conread position: 3-604
Cow position:
Alignm length: 616
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 436

Conread position: 3-604
Cow position:
Alignm length: 633
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 33

Conread position: 3-605
Cow position:
Alignm length: 620
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 21

Conread position: 3-611
Cow position:
Alignm length: 646
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 52

Conread position: 3-613
Cow position:
Alignm length: 637
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 224

Conread position: 3-613
Cow position:
Alignm length: 622
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 81

Conread position: 3-613
Cow position:
Alignm length: 628
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 443

Conread position: 3-613
Cow position:
Alignm length: 645
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 256

Conread position: 3-613
Cow position:
Alignm length: 628
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 378

Conread position: 3-614
Cow position:
Alignm length: 633
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 135

Conread position: 3-616
Cow position:
Alignm length: 638
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 30

Conread position: 3-620
Cow position:
Alignm length: 630
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 253

Conread position: 3-620
Cow position:
Alignm length: 634
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 51

Conread position: 3-620
Cow position:
Alignm length: 632
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 267

Conread position: 3-621
Cow position:
Alignm length: 634
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 213

Conread position: 3-622
Cow position:
Alignm length: 639
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 287

Conread position: 3-624
Cow position:
Alignm length: 649
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 449

Conread position: 3-689
Cow position:
Alignm length: 709
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 108

Conread position: 3-697
Cow position:
Alignm length: 699
Alignm identity: 433
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 327, 73

Conread position: 4-168
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 93

Conread position: 4-603
Cow position:
Alignm length: 609
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 205

Conread position: 4-613
Cow position:
Alignm length: 630
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 244

Conread position: 5-603
Cow position:
Alignm length: 610
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 122

Conread position: 5-603
Cow position:
Alignm length: 614
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 35

Conread position: 13-362
Cow position:
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 204

Conread position: 33-636
Cow position:
Alignm length: 624
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 168

Conread position: 37-620
Cow position:
Alignm length: 593
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 59

Conread position: 40-382
Cow position:
Alignm length: 351
Alignm identity: 227
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 34

Conread position: 40-468
Cow position:
Alignm length: 443
Alignm identity: 273
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 186

Conread position: 40-534
Cow position:
Alignm length: 511
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 112

Conread position: 43-611
Cow position:
Alignm length: 578
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 235

Conread position: 46-603
Cow position:
Alignm length: 576
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 155

Conread position: 47-263
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 47-599
Cow position:
Alignm length: 559
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 203

Conread position: 47-666
Cow position:
Alignm length: 629
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 51

Conread position: 54-443
Cow position:
Alignm length: 406
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 55-405
Cow position:
Alignm length: 359
Alignm identity: 231
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 196

Conread position: 61-446
Cow position:
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 213

Conread position: 62-374
Cow position:
Alignm length: 320
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 69-709
Cow position:
Alignm length: 660
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 204

Conread position: 71-547
Cow position:
Alignm length: 492
Alignm identity: 304
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 321

Conread position: 97-534
Cow position:
Alignm length: 444
Alignm identity: 273
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 59, 13

Conread position: 126-626
Cow position:
Alignm length: 516
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 122

Conread position: 131-389
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 150-405
Cow position:
Alignm length: 263
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 171, 97

Conread position: 157-704
Cow position:
Alignm length: 559
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 77

Conread position: 159-603
Cow position:
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 97

Conread position: 162-634
Cow position:
Alignm length: 479
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 269

Conread position: 175-603
Cow position:
Alignm length: 436
Alignm identity: 289
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 83, 129

Conread position: 189-384
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 86

Conread position: 214-618
Cow position:
Alignm length: 419
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 26

Conread position: 216-611
Cow position:
Alignm length: 399
Alignm identity: 261
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 58

Conread position: 225-603
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 32

Conread position: 237-612
Cow position:
Alignm length: 388
Alignm identity: 261
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 72, 21

Conread position: 244-569
Cow position:
Alignm length: 339
Alignm identity: 233
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 68, 271

Conread position: 251-555
Cow position:
Alignm length: 310
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 162, 185

Conread position: 255-708
Cow position:
Alignm length: 459
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 170

Conread position: 281-677
Cow position:
Alignm length: 403
Alignm identity: 260
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 160

Conread position: 304-708
Cow position:
Alignm length: 410
Alignm identity: 268
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 13

Conread position: 333-707
Cow position:
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 178

Conread position: 365-522
Cow position:
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 501-611
Cow position:
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 541-708
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 553-708
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 5

Show alignments to all cow chromosomes.