Cow genome map


           Conread name:
           Ova1-OVRM10106F05
        

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               71, 12
               

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 321
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 34
               

               Conread position:
               1-378
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 216
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               75, 166
               

               Conread position:
               1-390
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 340
               

               Conread position:
               1-395
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 208
               

               Conread position:
               1-572
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 131
               

               Conread position:
               1-613
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 37
               

               Conread position:
               1-618
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 112
               

               Conread position:
               1-622
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 214
               

               Conread position:
               1-636
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 34
               

               Conread position:
               1-682
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               433
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               1-708
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               2-260
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               2-663
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               3-147
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-349
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 189
               

               Conread position:
               3-405
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 145
               

               Conread position:
               3-412
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 26
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 268
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 253
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 243
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 270
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 257
               

               Conread position:
               3-472
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 467
               

               Conread position:
               3-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 243
               

               Conread position:
               3-534
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 117
               

               Conread position:
               3-599
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 35
               

               Conread position:
               3-602
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 247
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 168
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 443
               

               Conread position:
               3-612
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               388
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               79, 14
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 445
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 435
               

               Conread position:
               3-620
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 442
               

               Conread position:
               3-626
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 189
               

               Conread position:
               3-708
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 76
               

               Conread position:
               4-446
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 329
               

               Conread position:
               4-620
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 112
               

               Conread position:
               5-626
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 163
               

               Conread position:
               8-622
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 150
               

               Conread position:
               13-616
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 251
               

               Conread position:
               17-611
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 43
               

               Conread position:
               29-256
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               135, 66
               

               Conread position:
               40-559
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 10
               

               Conread position:
               48-442
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 299
               

               Conread position:
               50-462
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 60
               

               Conread position:
               51-442
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 217
               

               Conread position:
               78-620
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 164
               

               Conread position:
               145-362
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               157-415
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               78, 160
               

               Conread position:
               157-447
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               263, 85
               

               Conread position:
               160-463
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               36, 64
               

               Conread position:
               207-446
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               230-446
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               238-559
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 155
               

               Conread position:
               238-708
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 24
               

               Conread position:
               242-442
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               145, 27
               

               Conread position:
               242-612
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               273, 131
               

               Conread position:
               251-613
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 119
               

               Conread position:
               286-559
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 113
               

               Conread position:
               421-611
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               421-626
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 57
               

               Conread position:
               422-708
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 221
               

               Conread position:
               428-628
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               105, 7
               

               Conread position:
               434-708
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               249, 103
               

               Conread position:
               457-613
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 60
               

               Conread position:
               570-707
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               43, 0
               
Show alignments to all cow chromosomes.