Cow genome map

Conread name: Ova1-OVRM10106F05

Conread position: 1-178
Cow position: chr22:13917465-13917280 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 1-265
Cow position: chr22:34598632-34598362 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 12

Conread position: 1-342
Cow position: chr22:32485390-32485718 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 67

Conread position: 1-346
Cow position: chr22:4065603-4065244 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 221
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 75, 0

Conread position: 1-349
Cow position: chr22:157940-158312 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-362
Cow position: chr22:18816417-18816792 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 229

Conread position: 1-383
Cow position: chr22:5672699-5672307 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-390
Cow position: chr22:1319359-1318956 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-391
Cow position: chr22:46853304-46852903 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 188

Conread position: 1-415
Cow position: chr22:293195-293616 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 271
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 91

Conread position: 1-421
Cow position: chr22:11030922-11030506 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 295
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 72, 149

Conread position: 1-447
Cow position: chr22:9658284-9657826 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 298
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 274

Conread position: 1-578
Cow position: chr22:36736725-36736157 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 228

Conread position: 1-593
Cow position: chr22:302028-302625 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 376
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 55

Conread position: 1-599
Cow position: chr22:15851298-15850680 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 137

Conread position: 1-611
Cow position: chr22:3306771-3307377 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 37

Conread position: 1-612
Cow position: chr22:39882214-39882816 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 146

Conread position: 1-613
Cow position: chr22:8136239-8136851 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 12

Conread position: 1-627
Cow position: chr22:32348016-32348618 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 409
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 44, 172

Conread position: 1-706
Cow position: chr22:33351131-33350424 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 371

Conread position: 1-710
Cow position: chr22:7277488-7276766 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 217

Conread position: 3-124
Cow position: chr22:36533779-36533902 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 3-168
Cow position: chr22:15313990-15314157 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 3-191
Cow position: chr22:525720-525904 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 94

Conread position: 3-218
Cow position: chr22:27386471-27386698 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 110

Conread position: 3-221
Cow position: chr22:27284004-27283780 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 55

Conread position: 3-365
Cow position: chr22:10076796-10077160 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 74

Conread position: 3-367
Cow position: chr22:36861570-36861946 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-401
Cow position: chr22:41419734-41420133 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 60

Conread position: 3-402
Cow position: chr22:31335073-31335484 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-422
Cow position: chr22:46635746-46636162 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 59

Conread position: 3-441
Cow position: chr22:3278394-3278843 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 45

Conread position: 3-441
Cow position: chr22:5308063-5307623 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 108

Conread position: 3-442
Cow position: chr22:5233345-5233791 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 229

Conread position: 3-443
Cow position: chr22:10546605-10546155 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-444
Cow position: chr22:27309813-27310273 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 3-446
Cow position: chr22:6985215-6984756 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-446
Cow position: chr22:24949790-24949331 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-463
Cow position: chr22:327199-327663 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 35

Conread position: 3-463
Cow position: chr22:35672395-35672871 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 233

Conread position: 3-463
Cow position: chr22:37265414-37264938 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-463
Cow position: chr22:44369659-44370129 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 265

Conread position: 3-507
Cow position: chr22:1270550-1271056 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 109

Conread position: 3-529
Cow position: chr22:37131608-37131087 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 192

Conread position: 3-534
Cow position: chr22:34168292-34167746 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 116

Conread position: 3-597
Cow position: chr22:44609560-44608992 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 56

Conread position: 3-600
Cow position: chr22:1293536-1294146 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 86

Conread position: 3-603
Cow position: chr22:17328779-17329385 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 346

Conread position: 3-603
Cow position: chr22:37073230-37073806 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 494, 71

Conread position: 3-603
Cow position: chr22:44933940-44933330 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 439

Conread position: 3-609
Cow position: chr22:560745-561355 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 92

Conread position: 3-612
Cow position: chr22:5933024-5933657 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 496

Conread position: 3-613
Cow position: chr22:1284971-1285594 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 365

Conread position: 3-613
Cow position: chr22:1321572-1320959 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 214

Conread position: 3-613
Cow position: chr22:1878752-1878146 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 259

Conread position: 3-613
Cow position: chr22:16200446-16199810 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 199

Conread position: 3-613
Cow position: chr22:42991132-42990519 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 393

Conread position: 3-620
Cow position: chr22:19143739-19144364 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 215

Conread position: 3-620
Cow position: chr22:39469559-39470182 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 360

Conread position: 3-629
Cow position: chr22:31313301-31312669 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 433

Conread position: 5-372
Cow position: chr22:117857-118236 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 5-416
Cow position: chr22:44352998-44353411 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 71

Conread position: 5-603
Cow position: chr22:21589285-21588690 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 95

Conread position: 18-613
Cow position: chr22:44489832-44489204 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 190

Conread position: 38-405
Cow position: chr22:44395706-44395329 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 163

Conread position: 40-484
Cow position: chr22:6503741-6504184 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 202

Conread position: 43-446
Cow position: chr22:693552-693143 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 191

Conread position: 44-707
Cow position: chr22:309634-308990 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 49-463
Cow position: chr22:18475852-18476276 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 221

Conread position: 61-602
Cow position: chr22:13772681-13772135 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 35

Conread position: 68-629
Cow position: chr22:44457209-44456638 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 66

Conread position: 71-463
Cow position: chr22:10909967-10910370 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 132

Conread position: 80-534
Cow position: chr22:46585430-46585894 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 396

Conread position: 80-613
Cow position: chr22:1047258-1046727 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 190

Conread position: 82-368
Cow position: chr22:37067035-37067325 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 231

Conread position: 121-613
Cow position: chr22:36534125-36534614 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 129-603
Cow position: chr22:45880309-45880762 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 16

Conread position: 160-622
Cow position: chr22:42771339-42770904 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 173

Conread position: 161-622
Cow position: chr22:526119-526576 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 81

Conread position: 208-375
Cow position: chr22:36274521-36274362 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 209-385
Cow position: chr22:18930320-18930144 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 217-603
Cow position: chr22:36180879-36180486 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 63

Conread position: 238-613
Cow position: chr22:40380911-40380559 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 259
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 296, 20

Conread position: 243-610
Cow position: chr22:871128-871488 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 243
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 221, 8

Conread position: 253-490
Cow position: chr22:12732361-12732598 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 113, 171

Conread position: 268-603
Cow position: chr22:27386703-27387039 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 201, 162

Conread position: 288-405
Cow position: chr22:15314693-15314810 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 307-507
Cow position: chr22:48004311-48004110 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 8

Conread position: 333-613
Cow position: chr22:21006168-21005884 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 183, 70

Conread position: 418-706
Cow position: chr22:36273046-36272757 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 118, 15

Conread position: 434-706
Cow position: chr22:34696128-34695849 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 131

Show alignments to all cow chromosomes.