Cow genome map


           Conread name:
           Ova1-OVRM10106F05
        

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-265
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 67
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-349
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 229
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-390
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-391
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 188
               

               Conread position:
               1-415
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 91
               

               Conread position:
               1-421
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               72, 149
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               298
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               71, 274
               

               Conread position:
               1-578
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 228
               

               Conread position:
               1-593
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               376
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               1-599
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 137
               

               Conread position:
               1-611
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 37
               

               Conread position:
               1-612
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 146
               

               Conread position:
               1-613
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               1-627
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               409
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               44, 172
               

               Conread position:
               1-706
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 371
               

               Conread position:
               1-710
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 217
               

               Conread position:
               3-124
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               3-168
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-191
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 94
               

               Conread position:
               3-218
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 110
               

               Conread position:
               3-221
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 55
               

               Conread position:
               3-365
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 74
               

               Conread position:
               3-367
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               3-402
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-422
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 59
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 45
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 108
               

               Conread position:
               3-442
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 229
               

               Conread position:
               3-443
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-444
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 35
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 233
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 265
               

               Conread position:
               3-507
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 109
               

               Conread position:
               3-529
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 192
               

               Conread position:
               3-534
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 116
               

               Conread position:
               3-597
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 56
               

               Conread position:
               3-600
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 86
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 346
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               494, 71
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 439
               

               Conread position:
               3-609
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 92
               

               Conread position:
               3-612
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 496
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 365
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 214
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 259
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 199
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 393
               

               Conread position:
               3-620
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 215
               

               Conread position:
               3-620
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 360
               

               Conread position:
               3-629
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 433
               

               Conread position:
               5-372
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               5-416
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 71
               

               Conread position:
               5-603
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 95
               

               Conread position:
               18-613
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 190
               

               Conread position:
               38-405
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 163
               

               Conread position:
               40-484
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 202
               

               Conread position:
               43-446
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 191
               

               Conread position:
               44-707
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               49-463
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 221
               

               Conread position:
               61-602
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 35
               

               Conread position:
               68-629
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               71-463
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 132
               

               Conread position:
               80-534
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 396
               

               Conread position:
               80-613
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 190
               

               Conread position:
               82-368
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 231
               

               Conread position:
               121-613
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 275
               

               Conread position:
               129-603
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               160-622
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 173
               

               Conread position:
               161-622
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               346, 81
               

               Conread position:
               208-375
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               209-385
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               217-603
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 63
               

               Conread position:
               238-613
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               296, 20
               

               Conread position:
               243-610
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               221, 8
               

               Conread position:
               253-490
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               113, 171
               

               Conread position:
               268-603
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               201, 162
               

               Conread position:
               288-405
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               307-507
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               333-613
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               183, 70
               

               Conread position:
               418-706
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               118, 15
               

               Conread position:
               434-706
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               51, 131
               
Show alignments to all cow chromosomes.