Cow genome map

Conread name: Ova1-OVRM10106F05

Conread position: 1-192
Cow position: chr23:2524235-2524436 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 0

Conread position: 1-222
Cow position: chr23:4888645-4888410 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 1-319
Cow position: chr23:8980530-8980856 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-372
Cow position: chr23:5779124-5779506 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 1-390
Cow position: chr23:5874812-5875210 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 1-405
Cow position: chr23:7273609-7273208 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 1-412
Cow position: chr23:31651911-31652297 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 273
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 76, 12

Conread position: 1-460
Cow position: chr23:22875671-22876137 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 147

Conread position: 1-567
Cow position: chr23:4276917-4276357 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 188

Conread position: 1-599
Cow position: chr23:1025099-1025697 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 58

Conread position: 1-613
Cow position: chr23:3013608-3012982 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 270

Conread position: 1-616
Cow position: chr23:34175145-34174538 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 389
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 71, 85

Conread position: 1-618
Cow position: chr23:19017657-19017057 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 17

Conread position: 1-626
Cow position: chr23:988676-989300 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 382

Conread position: 1-651
Cow position: chr23:2340365-2339715 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 124

Conread position: 1-689
Cow position: chr23:19332439-19333142 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 52

Conread position: 3-162
Cow position: chr23:20156273-20156436 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 3-168
Cow position: chr23:14965786-14965955 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 3-171
Cow position: chr23:14974601-14974775 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 3-263
Cow position: chr23:2313277-2313549 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 3-263
Cow position: chr23:4751974-4751702 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 234

Conread position: 3-335
Cow position: chr23:31446775-31446431 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-352
Cow position: chr23:30636341-30636702 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-394
Cow position: chr23:967385-967790 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 116

Conread position: 3-441
Cow position: chr23:4434421-4433983 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 37

Conread position: 3-463
Cow position: chr23:4359790-4359322 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 270

Conread position: 3-463
Cow position: chr23:19950623-19951100 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 396

Conread position: 3-463
Cow position: chr23:20302175-20301696 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 381

Conread position: 3-534
Cow position: chr23:15219928-15220467 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 275

Conread position: 3-534
Cow position: chr23:27399464-27398932 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 116

Conread position: 3-603
Cow position: chr23:4640664-4641268 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 116

Conread position: 3-603
Cow position: chr23:28913371-28912764 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 13

Conread position: 3-603
Cow position: chr23:36031413-36032019 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 114

Conread position: 3-609
Cow position: chr23:11778432-11777834 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 63

Conread position: 3-613
Cow position: chr23:2027158-2027784 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 401

Conread position: 3-613
Cow position: chr23:28217251-28216602 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 266

Conread position: 3-617
Cow position: chr23:3881738-3882353 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 435

Conread position: 3-619
Cow position: chr23:2795605-2796220 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 94

Conread position: 3-622
Cow position: chr23:4816033-4815416 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 116

Conread position: 3-629
Cow position: chr23:15177035-15176388 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 411
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 73, 260

Conread position: 3-701
Cow position: chr23:16616889-16617581 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 61

Conread position: 4-571
Cow position: chr23:22147291-22147886 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 479

Conread position: 5-383
Cow position: chr23:15525568-15525182 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 6-618
Cow position: chr23:4510056-4509435 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 179

Conread position: 10-603
Cow position: chr23:19489491-19488884 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 453

Conread position: 31-372
Cow position: chr23:2765449-2765788 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 39

Conread position: 31-620
Cow position: chr23:19449955-19449360 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 372
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 45, 367

Conread position: 47-364
Cow position: chr23:2574481-2574153 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 85

Conread position: 47-534
Cow position: chr23:2716263-2715764 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 58-362
Cow position: chr23:16481447-16481761 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 27, 190

Conread position: 66-375
Cow position: chr23:1330392-1330709 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 70-603
Cow position: chr23:1141444-1140919 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 25

Conread position: 71-255
Cow position: chr23:16615978-16616168 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 84-613
Cow position: chr23:31595300-31595828 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 168

Conread position: 161-490
Cow position: chr23:14974978-14975304 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 246, 100

Conread position: 163-412
Cow position: chr23:14966184-14966434 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 201

Conread position: 172-327
Cow position: chr23:6469495-6469650 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 214-603
Cow position: chr23:2757239-2756856 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 108

Conread position: 277-708
Cow position: chr23:3490817-3491262 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 277
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 55

Conread position: 351-626
Cow position: chr23:2045650-2045363 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 167

Conread position: 358-703
Cow position: chr23:16481958-16482291 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 101, 45

Conread position: 418-613
Cow position: chr23:810669-810470 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 96

Conread position: 463-709
Cow position: chr23:22879667-22879920 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 53, 47

Conread position: 476-705
Cow position: chr23:7749648-7749422 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 87

Show alignments to all cow chromosomes.