Cow genome map
Conread name: | Ova1-OVRM10106F05 |
Conread position: | 1-192 |
Cow position: | chr23:2524235-2524436 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 155 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 1-222 |
Cow position: | chr23:4888645-4888410 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 174 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 1-319 |
Cow position: | chr23:8980530-8980856 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-372 |
Cow position: | chr23:5779124-5779506 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-390 |
Cow position: | chr23:5874812-5875210 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 1-405 |
Cow position: | chr23:7273609-7273208 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 34 |
Conread position: | 1-412 |
Cow position: | chr23:31651911-31652297 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 273 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 76, 12 |
Conread position: | 1-460 |
Cow position: | chr23:22875671-22876137 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 147 |
Conread position: | 1-567 |
Cow position: | chr23:4276917-4276357 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 188 |
Conread position: | 1-599 |
Cow position: | chr23:1025099-1025697 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 58 |
Conread position: | 1-613 |
Cow position: | chr23:3013608-3012982 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 270 |
Conread position: | 1-616 |
Cow position: | chr23:34175145-34174538 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 389 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 71, 85 |
Conread position: | 1-618 |
Cow position: | chr23:19017657-19017057 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 17 |
Conread position: | 1-626 |
Cow position: | chr23:988676-989300 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 382 |
Conread position: | 1-651 |
Cow position: | chr23:2340365-2339715 (view UCSC Genome Browser custom track) |
Alignm length: | 671 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 124 |
Conread position: | 1-689 |
Cow position: | chr23:19332439-19333142 (view UCSC Genome Browser custom track) |
Alignm length: | 715 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 52 |
Conread position: | 3-162 |
Cow position: | chr23:20156273-20156436 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 3-168 |
Cow position: | chr23:14965786-14965955 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 3-171 |
Cow position: | chr23:14974601-14974775 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 124 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 3-263 |
Cow position: | chr23:2313277-2313549 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 198 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 3-263 |
Cow position: | chr23:4751974-4751702 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 181 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 81, 234 |
Conread position: | 3-335 |
Cow position: | chr23:31446775-31446431 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 3-352 |
Cow position: | chr23:30636341-30636702 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 3-394 |
Cow position: | chr23:967385-967790 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 116 |
Conread position: | 3-441 |
Cow position: | chr23:4434421-4433983 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 37 |
Conread position: | 3-463 |
Cow position: | chr23:4359790-4359322 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 270 |
Conread position: | 3-463 |
Cow position: | chr23:19950623-19951100 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 396 |
Conread position: | 3-463 |
Cow position: | chr23:20302175-20301696 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 381 |
Conread position: | 3-534 |
Cow position: | chr23:15219928-15220467 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 275 |
Conread position: | 3-534 |
Cow position: | chr23:27399464-27398932 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 116 |
Conread position: | 3-603 |
Cow position: | chr23:4640664-4641268 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 116 |
Conread position: | 3-603 |
Cow position: | chr23:28913371-28912764 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 13 |
Conread position: | 3-603 |
Cow position: | chr23:36031413-36032019 (view UCSC Genome Browser custom track) |
Alignm length: | 616 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 114 |
Conread position: | 3-609 |
Cow position: | chr23:11778432-11777834 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 63 |
Conread position: | 3-613 |
Cow position: | chr23:2027158-2027784 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 401 |
Conread position: | 3-613 |
Cow position: | chr23:28217251-28216602 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 266 |
Conread position: | 3-617 |
Cow position: | chr23:3881738-3882353 (view UCSC Genome Browser custom track) |
Alignm length: | 626 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 435 |
Conread position: | 3-619 |
Cow position: | chr23:2795605-2796220 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 94 |
Conread position: | 3-622 |
Cow position: | chr23:4816033-4815416 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 116 |
Conread position: | 3-629 |
Cow position: | chr23:15177035-15176388 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 411 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 73, 260 |
Conread position: | 3-701 |
Cow position: | chr23:16616889-16617581 (view UCSC Genome Browser custom track) |
Alignm length: | 721 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 61 |
Conread position: | 4-571 |
Cow position: | chr23:22147291-22147886 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 479 |
Conread position: | 5-383 |
Cow position: | chr23:15525568-15525182 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 6-618 |
Cow position: | chr23:4510056-4509435 (view UCSC Genome Browser custom track) |
Alignm length: | 624 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 179 |
Conread position: | 10-603 |
Cow position: | chr23:19489491-19488884 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 453 |
Conread position: | 31-372 |
Cow position: | chr23:2765449-2765788 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 39 |
Conread position: | 31-620 |
Cow position: | chr23:19449955-19449360 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 372 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 45, 367 |
Conread position: | 47-364 |
Cow position: | chr23:2574481-2574153 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 85 |
Conread position: | 47-534 |
Cow position: | chr23:2716263-2715764 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 12 |
Conread position: | 58-362 |
Cow position: | chr23:16481447-16481761 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 227 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 27, 190 |
Conread position: | 66-375 |
Cow position: | chr23:1330392-1330709 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 70-603 |
Cow position: | chr23:1141444-1140919 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 25 |
Conread position: | 71-255 |
Cow position: | chr23:16615978-16616168 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 132 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 84-613 |
Cow position: | chr23:31595300-31595828 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 168 |
Conread position: | 161-490 |
Cow position: | chr23:14974978-14975304 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 233 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 246, 100 |
Conread position: | 163-412 |
Cow position: | chr23:14966184-14966434 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 201 |
Conread position: | 172-327 |
Cow position: | chr23:6469495-6469650 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 214-603 |
Cow position: | chr23:2757239-2756856 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 108 |
Conread position: | 277-708 |
Cow position: | chr23:3490817-3491262 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 277 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 48, 55 |
Conread position: | 351-626 |
Cow position: | chr23:2045650-2045363 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 197 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 56, 167 |
Conread position: | 358-703 |
Cow position: | chr23:16481958-16482291 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 257 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 101, 45 |
Conread position: | 418-613 |
Cow position: | chr23:810669-810470 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 144 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 118, 96 |
Conread position: | 463-709 |
Cow position: | chr23:22879667-22879920 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 190 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 53, 47 |
Conread position: | 476-705 |
Cow position: | chr23:7749648-7749422 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 157 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 64, 87 |
Show alignments to all cow chromosomes.