Cow genome map


           Conread name:
           Ova1-OVRM10106F05
        

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               74, 88
               

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 210
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 327
               

               Conread position:
               1-611
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 102
               

               Conread position:
               1-613
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 256
               

               Conread position:
               1-618
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 131
               

               Conread position:
               1-620
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 82
               

               Conread position:
               1-623
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               1-627
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 112
               

               Conread position:
               1-628
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               409
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               108, 48
               

               Conread position:
               1-699
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 49
               

               Conread position:
               1-700
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               451
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               75, 14
               

               Conread position:
               1-704
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 97
               

               Conread position:
               1-709
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 115
               

               Conread position:
               2-613
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               3-162
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-163
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-168
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 110
               

               Conread position:
               3-263
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               73, 227
               

               Conread position:
               3-300
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               73, 271
               

               Conread position:
               3-308
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-367
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 63
               

               Conread position:
               3-370
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-380
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 268
               

               Conread position:
               3-385
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 128
               

               Conread position:
               3-412
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 24
               

               Conread position:
               3-443
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 233
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 271
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 223
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 285
               

               Conread position:
               3-462
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 392
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               325
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               72, 232
               

               Conread position:
               3-534
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 110
               

               Conread position:
               3-578
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 76
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 287
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 436
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 412
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 197
               

               Conread position:
               3-631
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 44
               

               Conread position:
               4-199
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               4-538
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 452
               

               Conread position:
               6-699
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 65
               

               Conread position:
               13-613
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 381
               

               Conread position:
               43-631
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 213
               

               Conread position:
               45-534
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               309
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               31, 77
               

               Conread position:
               46-465
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               270
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               119, 38
               

               Conread position:
               49-599
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 17
               

               Conread position:
               50-412
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               53-404
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 46
               

               Conread position:
               61-412
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 165
               

               Conread position:
               80-671
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               383
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               66, 177
               

               Conread position:
               96-678
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               120-365
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               41, 124
               

               Conread position:
               122-403
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 151
               

               Conread position:
               127-446
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               137-632
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               346
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 129
               

               Conread position:
               153-603
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               371, 12
               

               Conread position:
               157-613
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               374, 7
               

               Conread position:
               184-446
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               202, 107
               

               Conread position:
               207-597
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 170
               

               Conread position:
               208-628
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               288
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               296, 16
               

               Conread position:
               239-368
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               248-639
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               73, 102
               

               Conread position:
               340-710
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               262
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               147, 37
               

               Conread position:
               358-613
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 224
               

               Conread position:
               404-708
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 107
               
Show alignments to all cow chromosomes.