Cow genome map
| Conread name: | Ova1-OVRM10106F05 |
| Conread position: | 1-191 |
| Cow position: | chr24:14585141-14584940 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 88 |
| Conread position: | 1-362 |
| Cow position: | chr24:36560035-36560396 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 210 |
| Conread position: | 1-372 |
| Cow position: | chr24:35838577-35838961 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 327 |
| Conread position: | 1-611 |
| Cow position: | chr24:16649252-16649885 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 102 |
| Conread position: | 1-613 |
| Cow position: | chr24:12237102-12236479 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 256 |
| Conread position: | 1-618 |
| Cow position: | chr24:13531488-13532099 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 131 |
| Conread position: | 1-620 |
| Cow position: | chr24:17187589-17186986 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 1-623 |
| Cow position: | chr24:15392261-15392894 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 265 |
| Conread position: | 1-627 |
| Cow position: | chr24:6335743-6335102 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 112 |
| Conread position: | 1-628 |
| Cow position: | chr24:12568292-12567646 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 409 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 108, 48 |
| Conread position: | 1-699 |
| Cow position: | chr24:32331373-32330684 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 49 |
| Conread position: | 1-700 |
| Cow position: | chr24:14282561-14283240 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 451 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 75, 14 |
| Conread position: | 1-704 |
| Cow position: | chr24:35841569-35842247 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 97 |
| Conread position: | 1-709 |
| Cow position: | chr24:12288681-12289394 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 115 |
| Conread position: | 2-613 |
| Cow position: | chr24:12797718-12798330 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 48 |
| Conread position: | 3-162 |
| Cow position: | chr24:9092227-9092390 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 3-163 |
| Cow position: | chr24:40548924-40548759 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-168 |
| Cow position: | chr24:22952182-22952013 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 3-263 |
| Cow position: | chr24:12224423-12224705 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 73, 227 |
| Conread position: | 3-300 |
| Cow position: | chr24:8030197-8029888 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 73, 271 |
| Conread position: | 3-308 |
| Cow position: | chr24:2636166-2635849 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-367 |
| Cow position: | chr24:7061146-7060777 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 63 |
| Conread position: | 3-370 |
| Cow position: | chr24:12485271-12485650 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-380 |
| Cow position: | chr24:13188231-13187852 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 268 |
| Conread position: | 3-385 |
| Cow position: | chr24:12113994-12114378 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 128 |
| Conread position: | 3-412 |
| Cow position: | chr24:36707892-36707486 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 3-443 |
| Cow position: | chr24:6645459-6645008 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 3-446 |
| Cow position: | chr24:6084063-6083604 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 3-446 |
| Cow position: | chr24:6434287-6433825 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 233 |
| Conread position: | 3-446 |
| Cow position: | chr24:9188685-9189143 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 271 |
| Conread position: | 3-446 |
| Cow position: | chr24:22793219-22792763 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 3-446 |
| Cow position: | chr24:33739298-33739755 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 223 |
| Conread position: | 3-447 |
| Cow position: | chr24:13181305-13181745 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 3-447 |
| Cow position: | chr24:44017592-44017132 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 285 |
| Conread position: | 3-462 |
| Cow position: | chr24:12086245-12085781 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 392 |
| Conread position: | 3-463 |
| Cow position: | chr24:6025049-6025526 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 3-463 |
| Cow position: | chr24:16084614-16085103 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 72, 232 |
| Conread position: | 3-534 |
| Cow position: | chr24:4415479-4416014 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 110 |
| Conread position: | 3-578 |
| Cow position: | chr24:14390685-14391264 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 10 |
| Conread position: | 3-603 |
| Cow position: | chr24:12131442-12132048 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 76 |
| Conread position: | 3-603 |
| Cow position: | chr24:14384567-14385173 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 287 |
| Conread position: | 3-603 |
| Cow position: | chr24:19833427-19832822 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 436 |
| Conread position: | 3-613 |
| Cow position: | chr24:6145406-6144787 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 412 |
| Conread position: | 3-613 |
| Cow position: | chr24:12161925-12161306 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 197 |
| Conread position: | 3-631 |
| Cow position: | chr24:148571-149182 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 44 |
| Conread position: | 4-199 |
| Cow position: | chr24:12335748-12335946 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 4-538 |
| Cow position: | chr24:33933411-33932857 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 452 |
| Conread position: | 6-699 |
| Cow position: | chr24:1447600-1446916 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 65 |
| Conread position: | 13-613 |
| Cow position: | chr24:13021704-13021098 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 381 |
| Conread position: | 43-631 |
| Cow position: | chr24:39678435-39677847 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 213 |
| Conread position: | 45-534 |
| Cow position: | chr24:40654395-40653919 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 309 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 46-465 |
| Cow position: | chr24:6537549-6537139 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 270 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 49-599 |
| Cow position: | chr24:6352195-6351637 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 50-412 |
| Cow position: | chr24:36297159-36296793 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 107 |
| Conread position: | 53-404 |
| Cow position: | chr24:12208128-12207777 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 61-412 |
| Cow position: | chr24:14885255-14885619 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 14, 165 |
| Conread position: | 80-671 |
| Cow position: | chr24:6057639-6057053 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 383 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 66, 177 |
| Conread position: | 96-678 |
| Cow position: | chr24:32125564-32126124 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 120-365 |
| Cow position: | chr24:37301156-37301401 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 41, 124 |
| Conread position: | 122-403 |
| Cow position: | chr24:35990738-35991017 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 151 |
| Conread position: | 127-446 |
| Cow position: | chr24:20268136-20267805 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 137-632 |
| Cow position: | chr24:5993069-5993587 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 346 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 28, 129 |
| Conread position: | 153-603 |
| Cow position: | chr24:29186689-29186242 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 371, 12 |
| Conread position: | 157-613 |
| Cow position: | chr24:37216606-37216146 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 7 |
| Conread position: | 184-446 |
| Cow position: | chr24:7712445-7712704 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 202, 107 |
| Conread position: | 207-597 |
| Cow position: | chr24:17314483-17314873 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 170 |
| Conread position: | 208-628 |
| Cow position: | chr24:14583926-14583525 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 288 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 296, 16 |
| Conread position: | 239-368 |
| Cow position: | chr24:11156843-11156973 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 248-639 |
| Cow position: | chr24:29372522-29372922 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 73, 102 |
| Conread position: | 340-710 |
| Cow position: | chr24:33432766-33432407 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 147, 37 |
| Conread position: | 358-613 |
| Cow position: | chr24:36560543-36560810 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 224 |
| Conread position: | 404-708 |
| Cow position: | chr24:36707269-36706959 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 107 |
Show alignments to all cow chromosomes.