Cow genome map
| Conread name: | Ova1-OVRM10106F05 |
| Conread position: | 1-165 |
| Cow position: | chr25:18302795-18302628 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 155 |
| Conread position: | 1-258 |
| Cow position: | chr25:36240551-36240282 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1-350 |
| Cow position: | chr25:34656440-34656801 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-372 |
| Cow position: | chr25:14016171-14015799 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 1-411 |
| Cow position: | chr25:18411284-18411699 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 59 |
| Conread position: | 1-612 |
| Cow position: | chr25:19288350-19288959 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 1-613 |
| Cow position: | chr25:17468691-17469305 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 250 |
| Conread position: | 1-626 |
| Cow position: | chr25:11375343-11375963 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 382 |
| Conread position: | 2-707 |
| Cow position: | chr25:11933522-11934263 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 215 |
| Conread position: | 3-375 |
| Cow position: | chr25:20629580-20629196 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-390 |
| Cow position: | chr25:18060586-18060989 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 12 |
| Conread position: | 3-421 |
| Cow position: | chr25:18255362-18255781 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 202 |
| Conread position: | 3-446 |
| Cow position: | chr25:20776896-20777354 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 10 |
| Conread position: | 3-446 |
| Cow position: | chr25:32579968-32579529 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 117 |
| Conread position: | 3-446 |
| Cow position: | chr25:35362420-35362875 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 280 |
| Conread position: | 3-463 |
| Cow position: | chr25:19917086-19916616 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 309 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 73, 274 |
| Conread position: | 3-507 |
| Cow position: | chr25:25506653-25506145 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 439 |
| Conread position: | 3-603 |
| Cow position: | chr25:13781032-13780432 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 131 |
| Conread position: | 3-603 |
| Cow position: | chr25:18890012-18890608 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 319 |
| Conread position: | 3-603 |
| Cow position: | chr25:34346989-34347595 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 221 |
| Conread position: | 3-613 |
| Cow position: | chr25:8674918-8674313 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 116 |
| Conread position: | 3-613 |
| Cow position: | chr25:18173365-18172698 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 347 |
| Conread position: | 3-613 |
| Cow position: | chr25:33991056-33991679 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 402 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 73, 56 |
| Conread position: | 3-621 |
| Cow position: | chr25:18275825-18276465 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 3-642 |
| Cow position: | chr25:26279268-26278634 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 125 |
| Conread position: | 4-446 |
| Cow position: | chr25:17589547-17589999 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 231 |
| Conread position: | 5-372 |
| Cow position: | chr25:18027625-18028006 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 261 |
| Conread position: | 8-463 |
| Cow position: | chr25:26922226-26921758 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 135 |
| Conread position: | 8-603 |
| Cow position: | chr25:17560614-17561216 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 123 |
| Conread position: | 13-613 |
| Cow position: | chr25:22147487-22146881 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 15-657 |
| Cow position: | chr25:18093009-18092354 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 103 |
| Conread position: | 29-637 |
| Cow position: | chr25:12759619-12760242 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 162 |
| Conread position: | 30-464 |
| Cow position: | chr25:17562945-17563375 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 101 |
| Conread position: | 37-596 |
| Cow position: | chr25:26867194-26866628 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 411 |
| Conread position: | 93-605 |
| Cow position: | chr25:20494265-20493758 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 332 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 99-708 |
| Cow position: | chr25:23345804-23346407 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 153 |
| Conread position: | 155-350 |
| Cow position: | chr25:12943598-12943793 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 157-611 |
| Cow position: | chr25:24171866-24171426 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 297 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 223, 85 |
| Conread position: | 160-613 |
| Cow position: | chr25:18302611-18302158 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 135 |
| Conread position: | 180-700 |
| Cow position: | chr25:29357702-29357201 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 340 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 291, 24 |
| Conread position: | 189-629 |
| Cow position: | chr25:34014541-34014972 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 104 |
| Conread position: | 219-416 |
| Cow position: | chr25:32978983-32979181 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 316-566 |
| Cow position: | chr25:36239907-36239659 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 220, 116 |
Show alignments to all cow chromosomes.