Cow genome map
| Conread name: | Ova1-OVRM10106F05 |
| Conread position: | 1-169 |
| Cow position: | chr26:12656319-12656149 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 1-362 |
| Cow position: | chr26:12665996-12665639 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 54 |
| Conread position: | 1-365 |
| Cow position: | chr26:3691831-3691451 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 1-368 |
| Cow position: | chr26:12574371-12574749 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-372 |
| Cow position: | chr26:4605158-4605537 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 234 |
| Conread position: | 1-388 |
| Cow position: | chr26:3074553-3074161 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 73, 136 |
| Conread position: | 3-222 |
| Cow position: | chr26:30589354-30589576 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 95, 26 |
| Conread position: | 3-306 |
| Cow position: | chr26:11536811-11537123 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 3-375 |
| Cow position: | chr26:18855112-18854735 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 270 |
| Conread position: | 3-378 |
| Cow position: | chr26:6850151-6850537 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 56 |
| Conread position: | 3-404 |
| Cow position: | chr26:20255094-20254685 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 224 |
| Conread position: | 3-405 |
| Cow position: | chr26:5675182-5674780 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 56 |
| Conread position: | 3-447 |
| Cow position: | chr26:2352335-2352784 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 269 |
| Conread position: | 3-447 |
| Cow position: | chr26:8869900-8869442 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 51 |
| Conread position: | 3-534 |
| Cow position: | chr26:9563334-9563868 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 119 |
| Conread position: | 3-566 |
| Cow position: | chr26:2198651-2198065 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 375 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 73, 270 |
| Conread position: | 3-603 |
| Cow position: | chr26:19351491-19352099 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 437 |
| Conread position: | 3-613 |
| Cow position: | chr26:3030806-3031431 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 96 |
| Conread position: | 3-613 |
| Cow position: | chr26:11254033-11254688 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-629 |
| Cow position: | chr26:17396908-17397545 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 32 |
| Conread position: | 4-390 |
| Cow position: | chr26:23604878-23605284 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 6-169 |
| Cow position: | chr26:9845592-9845757 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 160 |
| Conread position: | 7-446 |
| Cow position: | chr26:12588545-12588995 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 252 |
| Conread position: | 10-373 |
| Cow position: | chr26:15144744-15145115 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 48-446 |
| Cow position: | chr26:9112445-9112031 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 56-711 |
| Cow position: | chr26:9850652-9851340 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 289 |
| Conread position: | 56-711 |
| Cow position: | chr26:9854118-9854804 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 147 |
| Conread position: | 71-461 |
| Cow position: | chr26:8283094-8283484 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 73-367 |
| Cow position: | chr26:16904728-16904435 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 97-447 |
| Cow position: | chr26:30782691-30782333 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 177 |
| Conread position: | 97-600 |
| Cow position: | chr26:6516780-6516281 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 324 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 137-446 |
| Cow position: | chr26:24201505-24201187 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 160-446 |
| Cow position: | chr26:19998342-19998052 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 162-609 |
| Cow position: | chr26:9846281-9846732 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 236 |
| Conread position: | 163-424 |
| Cow position: | chr26:12655798-12655547 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 149, 23 |
| Conread position: | 168-564 |
| Cow position: | chr26:20262694-20262330 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 211-613 |
| Cow position: | chr26:34012824-34012422 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 199 |
| Conread position: | 214-534 |
| Cow position: | chr26:30590439-30590751 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 229-384 |
| Cow position: | chr26:19142507-19142355 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 229-613 |
| Cow position: | chr26:35150086-35150449 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 249-668 |
| Cow position: | chr26:28424166-28424580 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 290 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 343-708 |
| Cow position: | chr26:6601649-6601288 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 53 |
| Conread position: | 346-707 |
| Cow position: | chr26:12665299-12664936 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 46, 89 |
| Conread position: | 390-689 |
| Cow position: | chr26:16904273-16903968 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 150, 28 |
| Conread position: | 506-681 |
| Cow position: | chr26:12582263-12582436 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 533-696 |
| Cow position: | chr26:20299628-20299789 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 606-707 |
| Cow position: | chr26:20032563-20032461 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
Show alignments to all cow chromosomes.