Cow genome map
| Conread name: | Ova1-OVRM10106F05 |
| Conread position: | 1-411 |
| Cow position: | chr27:15278104-15278526 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 45 |
| Conread position: | 1-566 |
| Cow position: | chr27:1209314-1208745 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 235 |
| Conread position: | 1-626 |
| Cow position: | chr27:16439286-16438677 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 94 |
| Conread position: | 1-677 |
| Cow position: | chr27:3996413-3997110 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 256 |
| Conread position: | 3-263 |
| Cow position: | chr27:26227255-26226989 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 3-412 |
| Cow position: | chr27:25002570-25002995 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 380 |
| Conread position: | 3-446 |
| Cow position: | chr27:15541289-15540833 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-446 |
| Cow position: | chr27:16034432-16034887 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 233 |
| Conread position: | 3-553 |
| Cow position: | chr27:14460496-14461054 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 207 |
| Conread position: | 3-603 |
| Cow position: | chr27:5910823-5910218 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 100 |
| Conread position: | 3-603 |
| Cow position: | chr27:9993245-9993840 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 210 |
| Conread position: | 3-603 |
| Cow position: | chr27:23335122-23334516 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 348 |
| Conread position: | 3-603 |
| Cow position: | chr27:27662860-27662246 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 30 |
| Conread position: | 3-609 |
| Cow position: | chr27:26556025-26556640 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 18 |
| Conread position: | 3-613 |
| Cow position: | chr27:893170-892557 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 319 |
| Conread position: | 3-613 |
| Cow position: | chr27:25804923-25805534 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 297 |
| Conread position: | 3-619 |
| Cow position: | chr27:26324776-26324149 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 440 |
| Conread position: | 3-700 |
| Cow position: | chr27:25999107-25999795 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 26 |
| Conread position: | 7-463 |
| Cow position: | chr27:2364706-2364228 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 47 |
| Conread position: | 49-628 |
| Cow position: | chr27:5906940-5906362 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 369 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 6, 120 |
| Conread position: | 54-385 |
| Cow position: | chr27:5996823-5997178 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 286 |
| Conread position: | 55-613 |
| Cow position: | chr27:13898100-13897539 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 72-372 |
| Cow position: | chr27:27051554-27051244 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 74-617 |
| Cow position: | chr27:25117131-25116586 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 182-375 |
| Cow position: | chr27:16432242-16432048 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 211-629 |
| Cow position: | chr27:11471652-11472064 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 283 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 168, 35 |
| Conread position: | 229-390 |
| Cow position: | chr27:23930420-23930582 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 251-699 |
| Cow position: | chr27:6006707-6006273 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 63, 88 |
| Conread position: | 252-372 |
| Cow position: | chr27:27308071-27307951 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 285-582 |
| Cow position: | chr27:5985427-5985728 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 160, 37 |
| Conread position: | 301-620 |
| Cow position: | chr27:15638859-15639176 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 223, 129 |
| Conread position: | 356-707 |
| Cow position: | chr27:27198232-27198594 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 87 |
| Conread position: | 367-612 |
| Cow position: | chr27:25002906-25003155 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 420-635 |
| Cow position: | chr27:15331546-15331325 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 84, 96 |
Show alignments to all cow chromosomes.