Cow genome map
Conread name: | Ova1-OVRM10106F05 |
Conread position: | 1-263 |
Cow position: | chr29:21427082-21427355 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 193 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 71, 262 |
Conread position: | 1-263 |
Cow position: | chr29:34608979-34609246 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 184 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 71, 166 |
Conread position: | 1-376 |
Cow position: | chr29:14013443-14013058 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 252 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 83, 15 |
Conread position: | 1-376 |
Cow position: | chr29:14072968-14073355 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 253 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 83, 15 |
Conread position: | 1-390 |
Cow position: | chr29:35196645-35196259 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 131 |
Conread position: | 1-436 |
Cow position: | chr29:12796501-12796933 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 34 |
Conread position: | 1-530 |
Cow position: | chr29:19893735-19893212 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 334 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 91, 12 |
Conread position: | 1-573 |
Cow position: | chr29:21543392-21543964 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 266 |
Conread position: | 1-626 |
Cow position: | chr29:10848136-10848758 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 226 |
Conread position: | 1-626 |
Cow position: | chr29:16770101-16769493 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 96 |
Conread position: | 1-631 |
Cow position: | chr29:11049253-11048623 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 28 |
Conread position: | 1-635 |
Cow position: | chr29:15950209-15950843 (view UCSC Genome Browser custom track) |
Alignm length: | 650 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 211 |
Conread position: | 1-663 |
Cow position: | chr29:104545-103883 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 13 |
Conread position: | 1-694 |
Cow position: | chr29:32640751-32640075 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 210 |
Conread position: | 1-706 |
Cow position: | chr29:30811504-30810818 (view UCSC Genome Browser custom track) |
Alignm length: | 720 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 116 |
Conread position: | 2-636 |
Cow position: | chr29:2750434-2751054 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 453 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 11 |
Conread position: | 3-222 |
Cow position: | chr29:17662894-17662661 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 171 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 3-257 |
Cow position: | chr29:31181094-31180828 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 186 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 3-263 |
Cow position: | chr29:13853053-13853321 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 197 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 95, 128 |
Conread position: | 3-350 |
Cow position: | chr29:7840766-7840410 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 10 |
Conread position: | 3-383 |
Cow position: | chr29:43366029-43366412 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 44 |
Conread position: | 3-432 |
Cow position: | chr29:31121776-31121335 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 214 |
Conread position: | 3-446 |
Cow position: | chr29:15894880-15895334 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 360 |
Conread position: | 3-446 |
Cow position: | chr29:15969180-15969629 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 306 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 73, 140 |
Conread position: | 3-446 |
Cow position: | chr29:16109698-16109240 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 37 |
Conread position: | 3-446 |
Cow position: | chr29:28060694-28061154 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 3-463 |
Cow position: | chr29:610642-611118 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 63 |
Conread position: | 3-534 |
Cow position: | chr29:23975810-23975269 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 60 |
Conread position: | 3-588 |
Cow position: | chr29:2841398-2841976 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 435 |
Conread position: | 3-597 |
Cow position: | chr29:20251130-20250527 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 439 |
Conread position: | 3-598 |
Cow position: | chr29:2689872-2689289 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 281 |
Conread position: | 3-603 |
Cow position: | chr29:2099815-2099208 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 286 |
Conread position: | 3-603 |
Cow position: | chr29:10823985-10824595 (view UCSC Genome Browser custom track) |
Alignm length: | 623 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 116 |
Conread position: | 3-603 |
Cow position: | chr29:26164852-26165456 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 293 |
Conread position: | 3-603 |
Cow position: | chr29:39079735-39080345 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 439 |
Conread position: | 3-603 |
Cow position: | chr29:45459685-45459086 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 51 |
Conread position: | 3-606 |
Cow position: | chr29:25932574-25933188 (view UCSC Genome Browser custom track) |
Alignm length: | 624 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 92 |
Conread position: | 3-609 |
Cow position: | chr29:7431245-7431860 (view UCSC Genome Browser custom track) |
Alignm length: | 624 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 439 |
Conread position: | 3-613 |
Cow position: | chr29:16022500-16021879 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 143 |
Conread position: | 3-613 |
Cow position: | chr29:21246540-21245923 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 433 |
Conread position: | 3-613 |
Cow position: | chr29:27250364-27251013 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 267 |
Conread position: | 3-613 |
Cow position: | chr29:35296845-35296220 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 200 |
Conread position: | 3-613 |
Cow position: | chr29:43322530-43321900 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 479 |
Conread position: | 3-616 |
Cow position: | chr29:19623277-19623895 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 51 |
Conread position: | 3-618 |
Cow position: | chr29:27040793-27041400 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 378 |
Conread position: | 3-622 |
Cow position: | chr29:19653075-19652451 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 44 |
Conread position: | 3-626 |
Cow position: | chr29:6266523-6267155 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 234 |
Conread position: | 3-637 |
Cow position: | chr29:10648281-10648909 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 94 |
Conread position: | 4-383 |
Cow position: | chr29:34799840-34800223 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 220 |
Conread position: | 4-446 |
Cow position: | chr29:32316010-32315554 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 270 |
Conread position: | 4-603 |
Cow position: | chr29:5957572-5956952 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 430 |
Conread position: | 10-585 |
Cow position: | chr29:32539774-32539191 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 259 |
Conread position: | 13-534 |
Cow position: | chr29:48516-49040 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 420 |
Conread position: | 13-603 |
Cow position: | chr29:40503018-40503617 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 106 |
Conread position: | 15-599 |
Cow position: | chr29:4635008-4635577 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 366 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 59, 202 |
Conread position: | 44-362 |
Cow position: | chr29:1715175-1714860 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 215 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 70, 65 |
Conread position: | 46-534 |
Cow position: | chr29:38226929-38226430 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 163 |
Conread position: | 48-613 |
Cow position: | chr29:13578344-13577747 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 399 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 28, 189 |
Conread position: | 71-700 |
Cow position: | chr29:803425-804050 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 117 |
Conread position: | 97-405 |
Cow position: | chr29:9643851-9644164 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 103-707 |
Cow position: | chr29:32891078-32890476 (view UCSC Genome Browser custom track) |
Alignm length: | 626 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 322 |
Conread position: | 115-468 |
Cow position: | chr29:10844137-10843785 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 224 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 31, 155 |
Conread position: | 160-443 |
Cow position: | chr29:14368749-14368461 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 196 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 179, 0 |
Conread position: | 160-613 |
Cow position: | chr29:45587496-45587950 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 64 |
Conread position: | 169-368 |
Cow position: | chr29:2468147-2468346 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 143 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 173-662 |
Cow position: | chr29:34751904-34752370 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 342, 87 |
Conread position: | 238-613 |
Cow position: | chr29:21431617-21432001 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 281 |
Conread position: | 252-601 |
Cow position: | chr29:8663987-8663639 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 279, 135 |
Conread position: | 272-613 |
Cow position: | chr29:42650053-42649712 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 230 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 262, 137 |
Conread position: | 272-613 |
Cow position: | chr29:42801913-42801572 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 231 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 262, 137 |
Conread position: | 277-558 |
Cow position: | chr29:131279-131009 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 200 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 77, 152 |
Conread position: | 340-708 |
Cow position: | chr29:45464149-45464521 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 48 |
Conread position: | 388-705 |
Cow position: | chr29:1714701-1714380 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 219 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 58, 42 |
Conread position: | 473-642 |
Cow position: | chr29:5184939-5184764 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 43, 37 |
Conread position: | 494-699 |
Cow position: | chr29:6470977-6470768 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 149 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 46, 99 |
Show alignments to all cow chromosomes.