Cow genome map

Conread name: Ova1-OVRM10106F05

Conread position: 1-171
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 34

Conread position: 1-171
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 1-222
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 1-249
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 97, 30

Conread position: 1-257
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 72, 0

Conread position: 1-287
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 192

Conread position: 1-312
Cow position:
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 217

Conread position: 1-365
Cow position:
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 211

Conread position: 1-368
Cow position:
Alignm length: 374
Alignm identity: 257
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 96, 13

Conread position: 1-372
Cow position:
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 125

Conread position: 1-372
Cow position:
Alignm length: 383
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 114

Conread position: 1-390
Cow position:
Alignm length: 397
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 248

Conread position: 1-405
Cow position:
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 170

Conread position: 1-433
Cow position:
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 23

Conread position: 1-501
Cow position:
Alignm length: 512
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 209

Conread position: 1-613
Cow position:
Alignm length: 619
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 77

Conread position: 1-613
Cow position:
Alignm length: 639
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 89

Conread position: 1-613
Cow position:
Alignm length: 627
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 156

Conread position: 1-613
Cow position:
Alignm length: 626
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 420

Conread position: 1-623
Cow position:
Alignm length: 634
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 30

Conread position: 1-626
Cow position:
Alignm length: 644
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 32

Conread position: 1-626
Cow position:
Alignm length: 642
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 284

Conread position: 1-626
Cow position:
Alignm length: 646
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 151

Conread position: 1-626
Cow position:
Alignm length: 642
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 327

Conread position: 1-628
Cow position:
Alignm length: 642
Alignm identity: 411
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 75, 135

Conread position: 1-632
Cow position:
Alignm length: 651
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 258

Conread position: 1-634
Cow position:
Alignm length: 643
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 42

Conread position: 1-657
Cow position:
Alignm length: 678
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 41

Conread position: 1-696
Cow position:
Alignm length: 723
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 76

Conread position: 1-700
Cow position:
Alignm length: 722
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 14

Conread position: 1-708
Cow position:
Alignm length: 730
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 122

Conread position: 1-708
Cow position:
Alignm length: 732
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 49

Conread position: 1-708
Cow position:
Alignm length: 733
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 13

Conread position: 1-708
Cow position:
Alignm length: 730
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 32

Conread position: 1-709
Cow position:
Alignm length: 743
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 210

Conread position: 1-710
Cow position:
Alignm length: 739
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 134

Conread position: 2-363
Cow position:
Alignm length: 376
Alignm identity: 241
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 211

Conread position: 2-372
Cow position:
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 45

Conread position: 2-374
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 12

Conread position: 2-385
Cow position:
Alignm length: 398
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 110

Conread position: 2-534
Cow position:
Alignm length: 544
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 229

Conread position: 3-222
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 69, 110

Conread position: 3-244
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 70, 163

Conread position: 3-311
Cow position:
Alignm length: 323
Alignm identity: 224
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 76, 56

Conread position: 3-350
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-363
Cow position:
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-376
Cow position:
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 259

Conread position: 3-381
Cow position:
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 89

Conread position: 3-385
Cow position:
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 47

Conread position: 3-386
Cow position:
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 78

Conread position: 3-405
Cow position:
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 21

Conread position: 3-405
Cow position:
Alignm length: 421
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 87

Conread position: 3-415
Cow position:
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 63

Conread position: 3-429
Cow position:
Alignm length: 441
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-443
Cow position:
Alignm length: 457
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 44

Conread position: 3-446
Cow position:
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-446
Cow position:
Alignm length: 461
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 279

Conread position: 3-446
Cow position:
Alignm length: 457
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-446
Cow position:
Alignm length: 459
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 38

Conread position: 3-446
Cow position:
Alignm length: 458
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 279

Conread position: 3-446
Cow position:
Alignm length: 460
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-446
Cow position:
Alignm length: 455
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 140

Conread position: 3-446
Cow position:
Alignm length: 458
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 3-446
Cow position:
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-446
Cow position:
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-446
Cow position:
Alignm length: 460
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 207

Conread position: 3-447
Cow position:
Alignm length: 459
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 301

Conread position: 3-447
Cow position:
Alignm length: 462
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 255

Conread position: 3-448
Cow position:
Alignm length: 458
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 94

Conread position: 3-463
Cow position:
Alignm length: 473
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 100

Conread position: 3-463
Cow position:
Alignm length: 477
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 87

Conread position: 3-534
Cow position:
Alignm length: 545
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 14

Conread position: 3-534
Cow position:
Alignm length: 544
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 114

Conread position: 3-565
Cow position:
Alignm length: 588
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 87

Conread position: 3-597
Cow position:
Alignm length: 606
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 390

Conread position: 3-599
Cow position:
Alignm length: 609
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 55

Conread position: 3-599
Cow position:
Alignm length: 607
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 116

Conread position: 3-603
Cow position:
Alignm length: 616
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 116

Conread position: 3-603
Cow position:
Alignm length: 619
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 190

Conread position: 3-603
Cow position:
Alignm length: 616
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 414

Conread position: 3-603
Cow position:
Alignm length: 617
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 94

Conread position: 3-603
Cow position:
Alignm length: 620
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 443

Conread position: 3-604
Cow position:
Alignm length: 619
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 439

Conread position: 3-604
Cow position:
Alignm length: 620
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 281

Conread position: 3-604
Cow position:
Alignm length: 617
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 392

Conread position: 3-608
Cow position:
Alignm length: 622
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 370

Conread position: 3-613
Cow position:
Alignm length: 641
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 3-613
Cow position:
Alignm length: 636
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 438

Conread position: 3-613
Cow position:
Alignm length: 650
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 63

Conread position: 3-613
Cow position:
Alignm length: 630
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 432

Conread position: 3-613
Cow position:
Alignm length: 640
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 186

Conread position: 3-613
Cow position:
Alignm length: 653
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-620
Cow position:
Alignm length: 634
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 94

Conread position: 3-624
Cow position:
Alignm length: 646
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 55

Conread position: 3-629
Cow position:
Alignm length: 640
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 248

Conread position: 3-669
Cow position:
Alignm length: 682
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 47

Conread position: 4-571
Cow position:
Alignm length: 587
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 75

Conread position: 4-613
Cow position:
Alignm length: 632
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 19

Conread position: 4-613
Cow position:
Alignm length: 628
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 241

Conread position: 5-678
Cow position:
Alignm length: 687
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 74

Conread position: 6-618
Cow position:
Alignm length: 631
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 41

Conread position: 7-384
Cow position:
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 7-603
Cow position:
Alignm length: 611
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 106

Conread position: 8-365
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 156, 45

Conread position: 9-389
Cow position:
Alignm length: 395
Alignm identity: 253
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 61, 273

Conread position: 10-534
Cow position:
Alignm length: 529
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 146

Conread position: 13-613
Cow position:
Alignm length: 618
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 77

Conread position: 16-352
Cow position:
Alignm length: 351
Alignm identity: 236
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 60, 112

Conread position: 18-597
Cow position:
Alignm length: 597
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 128

Conread position: 26-525
Cow position:
Alignm length: 508
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 94

Conread position: 43-616
Cow position:
Alignm length: 594
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 173

Conread position: 44-412
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 68

Conread position: 46-412
Cow position:
Alignm length: 376
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 112

Conread position: 50-613
Cow position:
Alignm length: 603
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 58-603
Cow position:
Alignm length: 566
Alignm identity: 337
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 37

Conread position: 97-263
Cow position:
Alignm length: 171
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 97-371
Cow position:
Alignm length: 282
Alignm identity: 167
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 97-546
Cow position:
Alignm length: 457
Alignm identity: 285
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 11

Conread position: 97-692
Cow position:
Alignm length: 603
Alignm identity: 373
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 81

Conread position: 97-707
Cow position:
Alignm length: 621
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 84

Conread position: 102-446
Cow position:
Alignm length: 357
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 104

Conread position: 108-616
Cow position:
Alignm length: 524
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 151

Conread position: 116-372
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 8, 115

Conread position: 132-390
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 141

Conread position: 155-637
Cow position:
Alignm length: 490
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 45

Conread position: 160-468
Cow position:
Alignm length: 309
Alignm identity: 201
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 160-613
Cow position:
Alignm length: 484
Alignm identity: 319
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 211, 102

Conread position: 182-700
Cow position:
Alignm length: 527
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 38

Conread position: 189-446
Cow position:
Alignm length: 262
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 228, 0

Conread position: 201-587
Cow position:
Alignm length: 394
Alignm identity: 252
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 166, 71

Conread position: 213-708
Cow position:
Alignm length: 499
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 29

Conread position: 215-631
Cow position:
Alignm length: 423
Alignm identity: 283
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 291, 157

Conread position: 229-559
Cow position:
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 156

Conread position: 236-708
Cow position:
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 58

Conread position: 240-603
Cow position:
Alignm length: 370
Alignm identity: 247
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 296, 190

Conread position: 245-613
Cow position:
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 147

Conread position: 252-631
Cow position:
Alignm length: 386
Alignm identity: 245
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 255, 15

Conread position: 252-710
Cow position:
Alignm length: 472
Alignm identity: 319
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 97, 10

Conread position: 319-620
Cow position:
Alignm length: 307
Alignm identity: 200
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 199, 111

Conread position: 365-712
Cow position:
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 372-613
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 147

Conread position: 375-706
Cow position:
Alignm length: 348
Alignm identity: 244
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 20, 0

Conread position: 388-707
Cow position:
Alignm length: 327
Alignm identity: 224
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 23, 49

Conread position: 390-708
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 73

Conread position: 428-708
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 85, 76

Conread position: 468-710
Cow position:
Alignm length: 249
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 151

Show alignments to all cow chromosomes.