Cow genome map

Conread name: Ova1-OVRM10106F05

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 99

Conread position: 1-222
Cow position:
Alignm length: 231
Alignm identity: 178
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 1-274
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 74, 239

Conread position: 1-283
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 75, 25

Conread position: 1-363
Cow position:
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 83

Conread position: 1-383
Cow position:
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 64

Conread position: 1-383
Cow position:
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 125

Conread position: 1-384
Cow position:
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 13

Conread position: 1-390
Cow position:
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 241

Conread position: 1-395
Cow position:
Alignm length: 407
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 400

Conread position: 1-400
Cow position:
Alignm length: 411
Alignm identity: 284
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 55

Conread position: 1-406
Cow position:
Alignm length: 422
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 34

Conread position: 1-599
Cow position:
Alignm length: 625
Alignm identity: 393
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 69, 280

Conread position: 1-613
Cow position:
Alignm length: 633
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 89

Conread position: 1-613
Cow position:
Alignm length: 656
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 21

Conread position: 1-613
Cow position:
Alignm length: 624
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 150

Conread position: 1-614
Cow position:
Alignm length: 629
Alignm identity: 384
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 78, 102

Conread position: 1-616
Cow position:
Alignm length: 649
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 53

Conread position: 1-620
Cow position:
Alignm length: 642
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 280

Conread position: 1-626
Cow position:
Alignm length: 647
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 211

Conread position: 1-657
Cow position:
Alignm length: 672
Alignm identity: 425
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 14

Conread position: 1-702
Cow position:
Alignm length: 746
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 12

Conread position: 1-708
Cow position:
Alignm length: 719
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 14

Conread position: 1-708
Cow position:
Alignm length: 718
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 34

Conread position: 2-618
Cow position:
Alignm length: 626
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 74

Conread position: 3-163
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 3-163
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 3-260
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 73, 230

Conread position: 3-263
Cow position:
Alignm length: 273
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 73, 0

Conread position: 3-263
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 69, 233

Conread position: 3-282
Cow position:
Alignm length: 288
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 94

Conread position: 3-305
Cow position:
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 3-337
Cow position:
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 21

Conread position: 3-383
Cow position:
Alignm length: 393
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-385
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-441
Cow position:
Alignm length: 456
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 270

Conread position: 3-442
Cow position:
Alignm length: 456
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 140

Conread position: 3-446
Cow position:
Alignm length: 461
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 233

Conread position: 3-446
Cow position:
Alignm length: 458
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 270

Conread position: 3-446
Cow position:
Alignm length: 455
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 95

Conread position: 3-446
Cow position:
Alignm length: 460
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 285

Conread position: 3-446
Cow position:
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 354

Conread position: 3-446
Cow position:
Alignm length: 461
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 295

Conread position: 3-446
Cow position:
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 364

Conread position: 3-446
Cow position:
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 157

Conread position: 3-446
Cow position:
Alignm length: 461
Alignm identity: 312
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 44

Conread position: 3-446
Cow position:
Alignm length: 458
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 392

Conread position: 3-446
Cow position:
Alignm length: 464
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 229

Conread position: 3-446
Cow position:
Alignm length: 464
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 228

Conread position: 3-447
Cow position:
Alignm length: 463
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 123

Conread position: 3-463
Cow position:
Alignm length: 475
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-463
Cow position:
Alignm length: 474
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-539
Cow position:
Alignm length: 547
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 118

Conread position: 3-597
Cow position:
Alignm length: 611
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 230

Conread position: 3-603
Cow position:
Alignm length: 613
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 67

Conread position: 3-603
Cow position:
Alignm length: 623
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 257

Conread position: 3-603
Cow position:
Alignm length: 610
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 66

Conread position: 3-603
Cow position:
Alignm length: 618
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 328

Conread position: 3-603
Cow position:
Alignm length: 619
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 3-603
Cow position:
Alignm length: 612
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 24

Conread position: 3-603
Cow position:
Alignm length: 614
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 391

Conread position: 3-613
Cow position:
Alignm length: 632
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 441

Conread position: 3-613
Cow position:
Alignm length: 631
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 437

Conread position: 3-613
Cow position:
Alignm length: 626
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 13

Conread position: 3-613
Cow position:
Alignm length: 629
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 126

Conread position: 3-613
Cow position:
Alignm length: 651
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 234

Conread position: 3-616
Cow position:
Alignm length: 631
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 436

Conread position: 3-620
Cow position:
Alignm length: 635
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 372

Conread position: 3-628
Cow position:
Alignm length: 659
Alignm identity: 415
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 75, 118

Conread position: 3-629
Cow position:
Alignm length: 644
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 213

Conread position: 3-629
Cow position:
Alignm length: 641
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 115

Conread position: 3-629
Cow position:
Alignm length: 647
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 116

Conread position: 3-641
Cow position:
Alignm length: 657
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 382

Conread position: 4-361
Cow position:
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 20

Conread position: 4-446
Cow position:
Alignm length: 459
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 363

Conread position: 4-613
Cow position:
Alignm length: 629
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 142

Conread position: 4-613
Cow position:
Alignm length: 625
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 93

Conread position: 5-202
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 75

Conread position: 7-443
Cow position:
Alignm length: 454
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 229

Conread position: 7-597
Cow position:
Alignm length: 608
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 421

Conread position: 7-613
Cow position:
Alignm length: 626
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 157

Conread position: 8-327
Cow position:
Alignm length: 331
Alignm identity: 215
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 104, 58

Conread position: 10-603
Cow position:
Alignm length: 622
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 314

Conread position: 13-597
Cow position:
Alignm length: 603
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 217

Conread position: 15-604
Cow position:
Alignm length: 608
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 21

Conread position: 15-710
Cow position:
Alignm length: 708
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 97

Conread position: 20-415
Cow position:
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 378

Conread position: 24-171
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 21

Conread position: 25-613
Cow position:
Alignm length: 603
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 11

Conread position: 31-712
Cow position:
Alignm length: 698
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 177

Conread position: 40-641
Cow position:
Alignm length: 612
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 31

Conread position: 43-443
Cow position:
Alignm length: 403
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 108

Conread position: 48-612
Cow position:
Alignm length: 609
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 589

Conread position: 53-603
Cow position:
Alignm length: 566
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 389

Conread position: 77-446
Cow position:
Alignm length: 380
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 79, 0

Conread position: 78-603
Cow position:
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 362

Conread position: 80-708
Cow position:
Alignm length: 645
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 61

Conread position: 82-446
Cow position:
Alignm length: 379
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 97-346
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 97-431
Cow position:
Alignm length: 337
Alignm identity: 224
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 47, 11

Conread position: 97-504
Cow position:
Alignm length: 410
Alignm identity: 259
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 125, 48

Conread position: 97-522
Cow position:
Alignm length: 430
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 11

Conread position: 98-589
Cow position:
Alignm length: 500
Alignm identity: 314
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 59

Conread position: 100-710
Cow position:
Alignm length: 618
Alignm identity: 393
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 64, 8

Conread position: 113-708
Cow position:
Alignm length: 611
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 129

Conread position: 115-710
Cow position:
Alignm length: 603
Alignm identity: 387
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 123, 46

Conread position: 130-446
Cow position:
Alignm length: 330
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 24, 264

Conread position: 135-463
Cow position:
Alignm length: 339
Alignm identity: 232
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 93

Conread position: 138-707
Cow position:
Alignm length: 576
Alignm identity: 364
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 222, 104

Conread position: 146-573
Cow position:
Alignm length: 436
Alignm identity: 284
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 118

Conread position: 160-613
Cow position:
Alignm length: 461
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 167

Conread position: 162-608
Cow position:
Alignm length: 451
Alignm identity: 291
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 378, 74

Conread position: 173-704
Cow position:
Alignm length: 541
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 300

Conread position: 228-405
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 230-433
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 21

Conread position: 238-613
Cow position:
Alignm length: 380
Alignm identity: 248
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 9, 204

Conread position: 249-702
Cow position:
Alignm length: 461
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 89

Conread position: 249-710
Cow position:
Alignm length: 474
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 46

Conread position: 271-588
Cow position:
Alignm length: 326
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 55

Conread position: 296-626
Cow position:
Alignm length: 338
Alignm identity: 221
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 215, 124

Conread position: 307-679
Cow position:
Alignm length: 375
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 110

Conread position: 317-642
Cow position:
Alignm length: 334
Alignm identity: 215
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 143, 86

Conread position: 372-632
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 35, 110

Conread position: 509-708
Cow position:
Alignm length: 203
Alignm identity: 164
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 14, 8

Show alignments to all cow chromosomes.