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Cow genome map

           
Conread name:
           
Ova1-OVRM10114A05
        

               
Conread position:
               
1-147
               

               
Cow position:
               
chr20:4911649-4911797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr20:12584927-12584778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr20:7527805-7527537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 155
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr20:12551976-12552272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 198
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr20:32866786-32866418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr20:12839616-12839983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 130
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr20:18223019-18222591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 136
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr20:9411145-9411576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 135
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr20:3781873-3781421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 137
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr20:39425594-39425115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 150
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr20:10235411-10235884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr20:38488553-38489034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
41, 137
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr20:5538944-5539499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:8429310-8429865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 125
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr20:26076641-26077211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 98
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr20:7442594-7441994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 159
               

               
Conread position:
               
1-610
               

               
Cow position:
               
chr20:40781538-40782119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr20:4945685-4945077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr20:13877150-13876535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 150
               

               
Conread position:
               
2-595
               

               
Cow position:
               
chr20:33363075-33363661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 137
               

               
Conread position:
               
2-602
               

               
Cow position:
               
chr20:8577808-8578399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 124
               

               
Conread position:
               
3-630
               

               
Cow position:
               
chr20:29844604-29845228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 34
               

               
Conread position:
               
4-610
               

               
Cow position:
               
chr20:3599835-3599240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
4-610
               

               
Cow position:
               
chr20:36780172-36779570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
6-604
               

               
Cow position:
               
chr20:20202791-20203369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
7-145
               

               
Cow position:
               
chr20:25010366-25010227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
7-146
               

               
Cow position:
               
chr20:4205447-4205583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
7-146
               

               
Cow position:
               
chr20:6477302-6477444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
7-147
               

               
Cow position:
               
chr20:5117021-5116875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
7-229
               

               
Cow position:
               
chr20:22850681-22850895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 123
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr20:34107524-34107748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 140
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr20:10288489-10288712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
7-250
               

               
Cow position:
               
chr20:1191457-1191689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
83, 144
               

               
Conread position:
               
7-374
               

               
Cow position:
               
chr20:39875725-39875367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
7-378
               

               
Cow position:
               
chr20:14719175-14718813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-378
               

               
Cow position:
               
chr20:20898774-20899159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
85, 108
               

               
Conread position:
               
7-387
               

               
Cow position:
               
chr20:34836299-34835930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
88, 135
               

               
Conread position:
               
7-390
               

               
Cow position:
               
chr20:4893347-4892961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr20:13766688-13767122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr20:23802956-23803389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 122
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr20:27877289-27877723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr20:31221049-31221482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 99
               

               
Conread position:
               
7-454
               

               
Cow position:
               
chr20:5104869-5104436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 130
               

               
Conread position:
               
7-457
               

               
Cow position:
               
chr20:8910471-8910925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
7-457
               

               
Cow position:
               
chr20:27339629-27340070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
7-459
               

               
Cow position:
               
chr20:11614478-11614034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 141
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr20:18185139-18185579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
7-466
               

               
Cow position:
               
chr20:9474048-9473598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 144
               

               
Conread position:
               
7-466
               

               
Cow position:
               
chr20:13114867-13114412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
83, 144
               

               
Conread position:
               
7-466
               

               
Cow position:
               
chr20:24391567-24391996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
7-473
               

               
Cow position:
               
chr20:22446072-22445615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 136
               

               
Conread position:
               
7-474
               

               
Cow position:
               
chr20:11453795-11453331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 103
               

               
Conread position:
               
7-474
               

               
Cow position:
               
chr20:30817101-30817561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
7-477
               

               
Cow position:
               
chr20:6848172-6848653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
88, 196
               

               
Conread position:
               
7-477
               

               
Cow position:
               
chr20:10919750-10919282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-481
               

               
Cow position:
               
chr20:8482638-8482174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
7-481
               

               
Cow position:
               
chr20:35128781-35129250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-482
               

               
Cow position:
               
chr20:5958339-5957871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-482
               

               
Cow position:
               
chr20:14210588-14210120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
7-482
               

               
Cow position:
               
chr20:25297019-25296558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 129
               

               
Conread position:
               
7-482
               

               
Cow position:
               
chr20:29370613-29370150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-483
               

               
Cow position:
               
chr20:13048855-13048381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
142, 49
               

               
Conread position:
               
7-484
               

               
Cow position:
               
chr20:15295824-15296291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
7-487
               

               
Cow position:
               
chr20:19845568-19846050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
7-487
               

               
Cow position:
               
chr20:26826057-26825588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-487
               

               
Cow position:
               
chr20:28439642-28440121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-487
               

               
Cow position:
               
chr20:35036462-35035986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-555
               

               
Cow position:
               
chr20:19146434-19146981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
7-561
               

               
Cow position:
               
chr20:25844502-25843955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 122
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr20:6258497-6257940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 125
               

               
Conread position:
               
7-572
               

               
Cow position:
               
chr20:18550916-18551482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
7-575
               

               
Cow position:
               
chr20:22313591-22313037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 90
               

               
Conread position:
               
7-595
               

               
Cow position:
               
chr20:34597557-34596954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
7-606
               

               
Cow position:
               
chr20:25686777-25686194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
83, 94
               

               
Conread position:
               
7-607
               

               
Cow position:
               
chr20:4621771-4621200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
7-607
               

               
Cow position:
               
chr20:6423539-6424124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
7-607
               

               
Cow position:
               
chr20:9433177-9433742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 93
               

               
Conread position:
               
7-608
               

               
Cow position:
               
chr20:13493301-13493903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
7-610
               

               
Cow position:
               
chr20:398724-398149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 122
               

               
Conread position:
               
7-610
               

               
Cow position:
               
chr20:581356-580762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 90
               

               
Conread position:
               
7-610
               

               
Cow position:
               
chr20:40512227-40511598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
7-614
               

               
Cow position:
               
chr20:7757061-7756464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
7-616
               

               
Cow position:
               
chr20:12996449-12995842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 123
               

               
Conread position:
               
7-617
               

               
Cow position:
               
chr20:14806452-14807051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
7-622
               

               
Cow position:
               
chr20:13269192-13269785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 119
               

               
Conread position:
               
7-622
               

               
Cow position:
               
chr20:32846918-32847515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 122
               

               
Conread position:
               
7-626
               

               
Cow position:
               
chr20:11549931-11550539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
7-628
               

               
Cow position:
               
chr20:12421072-12420444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 29
               

               
Conread position:
               
8-375
               

               
Cow position:
               
chr20:13267862-13267504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 105
               

               
Conread position:
               
8-427
               

               
Cow position:
               
chr20:10818658-10818250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
82, 118
               

               
Conread position:
               
8-457
               

               
Cow position:
               
chr20:21324673-21325123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 116
               

               
Conread position:
               
8-558
               

               
Cow position:
               
chr20:9588157-9588718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
8-561
               

               
Cow position:
               
chr20:9014782-9014238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 131
               

               
Conread position:
               
8-568
               

               
Cow position:
               
chr20:21019132-21019682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
8-605
               

               
Cow position:
               
chr20:14572806-14572211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 77
               

               
Conread position:
               
8-610
               

               
Cow position:
               
chr20:6096917-6096337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
8-610
               

               
Cow position:
               
chr20:20983596-20984150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
8-616
               

               
Cow position:
               
chr20:23792168-23792767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 130
               

               
Conread position:
               
8-628
               

               
Cow position:
               
chr20:23871254-23870643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 100
               

               
Conread position:
               
9-144
               

               
Cow position:
               
chr20:10199932-10200071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
9-146
               

               
Cow position:
               
chr20:4668509-4668650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
9-229
               

               
Cow position:
               
chr20:22027596-22027801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
81, 141
               

               
Conread position:
               
9-459
               

               
Cow position:
               
chr20:8112380-8112829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 129
               

               
Conread position:
               
9-466
               

               
Cow position:
               
chr20:19352200-19351736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
140, 90
               

               
Conread position:
               
9-605
               

               
Cow position:
               
chr20:19363794-19363210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
10-487
               

               
Cow position:
               
chr20:17889518-17889046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
10-608
               

               
Cow position:
               
chr20:13652795-13652211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
77, 127
               

               
Conread position:
               
11-378
               

               
Cow position:
               
chr20:22651065-22651434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
11-457
               

               
Cow position:
               
chr20:19410794-19410357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
11-631
               

               
Cow position:
               
chr20:23065274-23064656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 121
               

               
Conread position:
               
12-241
               

               
Cow position:
               
chr20:9509359-9509141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 130
               

               
Conread position:
               
12-478
               

               
Cow position:
               
chr20:12321203-12321650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
14-581
               

               
Cow position:
               
chr20:34001817-34001261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 112
               

               
Conread position:
               
16-481
               

               
Cow position:
               
chr20:27641710-27642172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 90
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr20:14735232-14735689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 113
               

               
Conread position:
               
32-458
               

               
Cow position:
               
chr20:13821998-13821573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
300, 65
               

               
Conread position:
               
36-610
               

               
Cow position:
               
chr20:39415335-39415908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
37-561
               

               
Cow position:
               
chr20:10859769-10859244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr20:13501524-13501859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
50-471
               

               
Cow position:
               
chr20:7399085-7398672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
58-456
               

               
Cow position:
               
chr20:33176816-33177196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
58-614
               

               
Cow position:
               
chr20:31747007-31746473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
58-622
               

               
Cow position:
               
chr20:28604831-28605379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
59-616
               

               
Cow position:
               
chr20:5702365-5702888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
61-610
               

               
Cow position:
               
chr20:18321175-18320635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
61-614
               

               
Cow position:
               
chr20:40176872-40177407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
65-463
               

               
Cow position:
               
chr20:29633388-29632987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
71-609
               

               
Cow position:
               
chr20:19460011-19459508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
84-475
               

               
Cow position:
               
chr20:41500913-41500513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
94-608
               

               
Cow position:
               
chr20:38817671-38818155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 38
               

               
Conread position:
               
94-610
               

               
Cow position:
               
chr20:28982357-28982859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 38
               

               
Conread position:
               
136-631
               

               
Cow position:
               
chr20:2819247-2819724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
137-605
               

               
Cow position:
               
chr20:17845637-17846113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
138-610
               

               
Cow position:
               
chr20:21345086-21345591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 363
               

               
Conread position:
               
140-444
               

               
Cow position:
               
chr20:30836247-30836556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
140-457
               

               
Cow position:
               
chr20:12334069-12334383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
140-458
               

               
Cow position:
               
chr20:15577205-15576879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
140-466
               

               
Cow position:
               
chr20:4801081-4801414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
140-466
               

               
Cow position:
               
chr20:28759580-28759907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
140-468
               

               
Cow position:
               
chr20:11765919-11765586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
140-487
               

               
Cow position:
               
chr20:39543561-39543909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
9, 218
               

               
Conread position:
               
140-561
               

               
Cow position:
               
chr20:17657315-17656887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
140-610
               

               
Cow position:
               
chr20:19750998-19751465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
140-612
               

               
Cow position:
               
chr20:19328088-19328548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
140-613
               

               
Cow position:
               
chr20:19236777-19237236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
140-619
               

               
Cow position:
               
chr20:33531996-33532470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
143-575
               

               
Cow position:
               
chr20:9126426-9126860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 74
               

               
Conread position:
               
144-476
               

               
Cow position:
               
chr20:42138066-42138399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
5, 28
               

               
Conread position:
               
144-569
               

               
Cow position:
               
chr20:31740522-31740102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 80
               

               
Conread position:
               
148-466
               

               
Cow position:
               
chr20:7549953-7550255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
185, 67
               

               
Conread position:
               
148-624
               

               
Cow position:
               
chr20:24069510-24069978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 103
               

               
Conread position:
               
148-625
               

               
Cow position:
               
chr20:6240834-6240348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 322
               

               
Conread position:
               
148-630
               

               
Cow position:
               
chr20:5998979-5998484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 214
               

               
Conread position:
               
149-608
               

               
Cow position:
               
chr20:33144857-33144397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 105
               

               
Conread position:
               
149-622
               

               
Cow position:
               
chr20:9412192-9412658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 114
               

               
Conread position:
               
150-444
               

               
Cow position:
               
chr20:207326-207025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
150-444
               

               
Cow position:
               
chr20:34325870-34325568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 147
               

               
Conread position:
               
150-596
               

               
Cow position:
               
chr20:35797304-35797753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 22
               

               
Conread position:
               
150-628
               

               
Cow position:
               
chr20:17251408-17251894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 113
               

               
Conread position:
               
150-628
               

               
Cow position:
               
chr20:22959646-22959172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
150-630
               

               
Cow position:
               
chr20:39398177-39398659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 176
               

               
Conread position:
               
151-482
               

               
Cow position:
               
chr20:15068846-15069171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
116, 64
               

               
Conread position:
               
152-455
               

               
Cow position:
               
chr20:31069341-31069641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
180, 110
               

               
Conread position:
               
152-608
               

               
Cow position:
               
chr20:13751945-13752381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 77
               

               
Conread position:
               
152-620
               

               
Cow position:
               
chr20:25162411-25161957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 80
               

               
Conread position:
               
153-610
               

               
Cow position:
               
chr20:6054805-6054351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 54
               

               
Conread position:
               
157-470
               

               
Cow position:
               
chr20:15761243-15760925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
159-422
               

               
Cow position:
               
chr20:42278414-42278682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
168, 115
               

               
Conread position:
               
162-443
               

               
Cow position:
               
chr20:23952334-23952616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
188, 61
               

               
Conread position:
               
162-614
               

               
Cow position:
               
chr20:12582238-12581793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
163-444
               

               
Cow position:
               
chr20:3405789-3406073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
163-608
               

               
Cow position:
               
chr20:39728161-39728607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 76
               

               
Conread position:
               
163-613
               

               
Cow position:
               
chr20:7426479-7426036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
167-630
               

               
Cow position:
               
chr20:42469482-42469937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 6
               

               
Conread position:
               
172-624
               

               
Cow position:
               
chr20:25009921-25009460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr20:31147816-31148014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 78
               

               
Conread position:
               
177-466
               

               
Cow position:
               
chr20:5089082-5089380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 291
               

               
Conread position:
               
179-487
               

               
Cow position:
               
chr20:31464652-31464341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
183-444
               

               
Cow position:
               
chr20:22008761-22008500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
183-474
               

               
Cow position:
               
chr20:10178380-10178075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
183-558
               

               
Cow position:
               
chr20:35958379-35958754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 75
               

               
Conread position:
               
184-487
               

               
Cow position:
               
chr20:28559969-28559658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
184-564
               

               
Cow position:
               
chr20:21714483-21714873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
187-600
               

               
Cow position:
               
chr20:42310227-42309817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
102, 265
               

               
Conread position:
               
187-605
               

               
Cow position:
               
chr20:8703175-8702758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 128
               

               
Conread position:
               
188-440
               

               
Cow position:
               
chr20:38139640-38139899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 143
               

               
Conread position:
               
188-561
               

               
Cow position:
               
chr20:7659474-7659104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
190-444
               

               
Cow position:
               
chr20:26748566-26748828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
190-537
               

               
Cow position:
               
chr20:13967522-13967171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 308
               

               
Conread position:
               
192-620
               

               
Cow position:
               
chr20:22064812-22065234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
193-624
               

               
Cow position:
               
chr20:5950889-5950471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
182, 23
               

               
Conread position:
               
194-610
               

               
Cow position:
               
chr20:40127593-40127185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
199-561
               

               
Cow position:
               
chr20:14011716-14012078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 253
               

               
Conread position:
               
201-613
               

               
Cow position:
               
chr20:14679368-14679778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
202-575
               

               
Cow position:
               
chr20:3607202-3606838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
203-605
               

               
Cow position:
               
chr20:22235062-22235465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 227
               

               
Conread position:
               
214-572
               

               
Cow position:
               
chr20:11341044-11340684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 271
               

               
Conread position:
               
215-561
               

               
Cow position:
               
chr20:14650679-14650332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 239
               

               
Conread position:
               
215-610
               

               
Cow position:
               
chr20:39517774-39518164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
216-610
               

               
Cow position:
               
chr20:10208568-10208966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 6
               

               
Conread position:
               
216-612
               

               
Cow position:
               
chr20:10200104-10200506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 204
               

               
Conread position:
               
220-559
               

               
Cow position:
               
chr20:3331527-3331178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
46, 189
               

               
Conread position:
               
223-573
               

               
Cow position:
               
chr20:15549126-15548775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
223-605
               

               
Cow position:
               
chr20:18618408-18618772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 170
               

               
Conread position:
               
223-622
               

               
Cow position:
               
chr20:38873239-38872832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
227-570
               

               
Cow position:
               
chr20:4205737-4206090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 277
               

               
Conread position:
               
227-628
               

               
Cow position:
               
chr20:5826711-5827116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
228-596
               

               
Cow position:
               
chr20:11741528-11741161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
101, 240
               

               
Conread position:
               
229-554
               

               
Cow position:
               
chr20:20471566-20471887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
229-608
               

               
Cow position:
               
chr20:34776962-34777336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
33, 184
               

               
Conread position:
               
229-610
               

               
Cow position:
               
chr20:13829043-13829417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
230-612
               

               
Cow position:
               
chr20:38768676-38768303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
231-575
               

               
Cow position:
               
chr20:11482361-11482011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 238
               

               
Conread position:
               
232-470
               

               
Cow position:
               
chr20:11923460-11923221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
232-538
               

               
Cow position:
               
chr20:22704067-22704380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
34, 259
               

               
Conread position:
               
232-628
               

               
Cow position:
               
chr20:26996313-26996707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
233-441
               

               
Cow position:
               
chr20:33831647-33831863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
233-466
               

               
Cow position:
               
chr20:24135485-24135254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
235-466
               

               
Cow position:
               
chr20:40185891-40185665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 28
               

               
Conread position:
               
235-555
               

               
Cow position:
               
chr20:40256752-40257073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
235-616
               

               
Cow position:
               
chr20:14759882-14759501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 136
               

               
Conread position:
               
237-462
               

               
Cow position:
               
chr20:36331644-36331412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
238-608
               

               
Cow position:
               
chr20:13023693-13023347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 141
               

               
Conread position:
               
238-613
               

               
Cow position:
               
chr20:17669967-17670344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
28, 169
               

               
Conread position:
               
239-610
               

               
Cow position:
               
chr20:14879572-14879947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 144
               

               
Conread position:
               
239-612
               

               
Cow position:
               
chr20:28296076-28296455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 240
               

               
Conread position:
               
242-621
               

               
Cow position:
               
chr20:15566042-15565660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 226
               

               
Conread position:
               
245-459
               

               
Cow position:
               
chr20:7600985-7600772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
245-470
               

               
Cow position:
               
chr20:9379201-9379430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
245-555
               

               
Cow position:
               
chr20:23505621-23505931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 124
               

               
Conread position:
               
245-570
               

               
Cow position:
               
chr20:35897310-35897639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
22, 254
               

               
Conread position:
               
245-610
               

               
Cow position:
               
chr20:35907254-35906892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
137, 101
               

               
Conread position:
               
245-630
               

               
Cow position:
               
chr20:34251886-34251494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
246-530
               

               
Cow position:
               
chr20:32578127-32577840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
246-580
               

               
Cow position:
               
chr20:38551167-38551496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
246-600
               

               
Cow position:
               
chr20:15235557-15235900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
246-602
               

               
Cow position:
               
chr20:38578961-38578614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
87, 20
               

               
Conread position:
               
247-608
               

               
Cow position:
               
chr20:6602831-6603197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 224
               

               
Conread position:
               
247-614
               

               
Cow position:
               
chr20:15593090-15593447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
247-617
               

               
Cow position:
               
chr20:28067631-28067259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 186
               

               
Conread position:
               
248-459
               

               
Cow position:
               
chr20:38486753-38486538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 159
               

               
Conread position:
               
248-572
               

               
Cow position:
               
chr20:39325180-39325511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
12, 154
               

               
Conread position:
               
252-457
               

               
Cow position:
               
chr20:8020694-8020905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
252-610
               

               
Cow position:
               
chr20:29805862-29805501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
255-610
               

               
Cow position:
               
chr20:20739487-20739129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
255-612
               

               
Cow position:
               
chr20:8556472-8556109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 230
               

               
Conread position:
               
257-446
               

               
Cow position:
               
chr20:35760475-35760666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
257-622
               

               
Cow position:
               
chr20:12239875-12239513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
87, 125
               

               
Conread position:
               
258-631
               

               
Cow position:
               
chr20:13994615-13994993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
69, 185
               

               
Conread position:
               
259-457
               

               
Cow position:
               
chr20:37200160-37200366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
260-439
               

               
Cow position:
               
chr20:11043688-11043513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
260-604
               

               
Cow position:
               
chr20:11542475-11542135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 201
               

               
Conread position:
               
260-610
               

               
Cow position:
               
chr20:34098150-34097795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
73, 219
               

               
Conread position:
               
263-600
               

               
Cow position:
               
chr20:21928716-21929053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
263-605
               

               
Cow position:
               
chr20:32084273-32083929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
264-609
               

               
Cow position:
               
chr20:36207614-36207971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 121
               

               
Conread position:
               
265-621
               

               
Cow position:
               
chr20:31323610-31323955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
269-576
               

               
Cow position:
               
chr20:41028300-41028613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 125
               

               
Conread position:
               
270-549
               

               
Cow position:
               
chr20:11864318-11864034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 211
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr20:34107934-34108261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
271-610
               

               
Cow position:
               
chr20:14980696-14980348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 111
               

               
Conread position:
               
273-610
               

               
Cow position:
               
chr20:3141404-3141731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
274-623
               

               
Cow position:
               
chr20:27408056-27407722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 193
               

               
Conread position:
               
279-624
               

               
Cow position:
               
chr20:16935476-16935142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 170
               

               
Conread position:
               
283-626
               

               
Cow position:
               
chr20:14100607-14100261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
285-611
               

               
Cow position:
               
chr20:7439016-7438692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
288-457
               

               
Cow position:
               
chr20:28831799-28831976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
288-600
               

               
Cow position:
               
chr20:3321302-3320996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
288-600
               

               
Cow position:
               
chr20:7210871-7211182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 180
               

               
Conread position:
               
288-622
               

               
Cow position:
               
chr20:3254884-3255207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
292-603
               

               
Cow position:
               
chr20:8307853-8308167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
39, 195
               

               
Conread position:
               
299-536
               

               
Cow position:
               
chr20:18837314-18837070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
299-628
               

               
Cow position:
               
chr20:30710803-30710461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 313
               

               
Conread position:
               
300-600
               

               
Cow position:
               
chr20:13025760-13025462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
300-630
               

               
Cow position:
               
chr20:14433580-14433245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 165
               

               
Conread position:
               
302-572
               

               
Cow position:
               
chr20:36010639-36010916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 171
               

               
Conread position:
               
302-610
               

               
Cow position:
               
chr20:15569100-15568791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
302-628
               

               
Cow position:
               
chr20:5636330-5636658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
30, 165
               

               
Conread position:
               
302-629
               

               
Cow position:
               
chr20:32988982-32988655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
111, 32
               

               
Conread position:
               
302-631
               

               
Cow position:
               
chr20:20241950-20242264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
305-616
               

               
Cow position:
               
chr20:4334667-4334365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
224, 43
               

               
Conread position:
               
315-608
               

               
Cow position:
               
chr20:8546931-8547222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 95
               

               
Conread position:
               
315-622
               

               
Cow position:
               
chr20:9267238-9266937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
316-600
               

               
Cow position:
               
chr20:22484724-22485007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 142
               

               
Conread position:
               
316-610
               

               
Cow position:
               
chr20:20099725-20099443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
319-596
               

               
Cow position:
               
chr20:28441198-28441471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
319-610
               

               
Cow position:
               
chr20:7362838-7363120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
324-630
               

               
Cow position:
               
chr20:22978194-22978507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
328-608
               

               
Cow position:
               
chr20:35407741-35408007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
201, 133
               

               
Conread position:
               
334-608
               

               
Cow position:
               
chr20:1575983-1576253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
117, 71
               

               
Conread position:
               
334-624
               

               
Cow position:
               
chr20:32463637-32463352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 148
               

               
Conread position:
               
334-629
               

               
Cow position:
               
chr20:24833978-24834267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
126, 112
               

               
Conread position:
               
338-603
               

               
Cow position:
               
chr20:39267071-39266807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
340-611
               

               
Cow position:
               
chr20:10188165-10188434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
344-622
               

               
Cow position:
               
chr20:24711729-24712011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
37, 154
               

               
Conread position:
               
347-556
               

               
Cow position:
               
chr20:24000902-24000693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
347-572
               

               
Cow position:
               
chr20:19616383-19616612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
348-606
               

               
Cow position:
               
chr20:41883636-41883884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr20:40691955-40692219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
352-572
               

               
Cow position:
               
chr20:15118178-15118396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
352-624
               

               
Cow position:
               
chr20:18379284-18379550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
353-564
               

               
Cow position:
               
chr20:23103123-23103335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
109, 121
               

               
Conread position:
               
353-605
               

               
Cow position:
               
chr20:35710075-35710329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
103, 74
               

               
Conread position:
               
353-610
               

               
Cow position:
               
chr20:7738323-7738073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
177, 97
               

               
Conread position:
               
354-596
               

               
Cow position:
               
chr20:22265341-22265108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
175, 98
               

               
Conread position:
               
364-614
               

               
Cow position:
               
chr20:32866273-32866034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
376-605
               

               
Cow position:
               
chr20:38670685-38670903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
155, 71
               

               
Conread position:
               
376-610
               

               
Cow position:
               
chr20:5078550-5078785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 107
               

               
Conread position:
               
377-564
               

               
Cow position:
               
chr20:16548350-16548166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
155, 76
               

               
Conread position:
               
379-608
               

               
Cow position:
               
chr20:21204289-21204508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
150, 67
               

               
Conread position:
               
386-581
               

               
Cow position:
               
chr20:23506533-23506341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 73
               

               
Conread position:
               
386-605
               

               
Cow position:
               
chr20:20056548-20056333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
386-610
               

               
Cow position:
               
chr20:354960-354743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
206, 77
               

               
Conread position:
               
386-610
               

               
Cow position:
               
chr20:38089848-38090071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
145, 92
               

               
Conread position:
               
389-572
               

               
Cow position:
               
chr20:33819159-33819342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 92
               

               
Conread position:
               
391-572
               

               
Cow position:
               
chr20:16818357-16818539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
391-608
               

               
Cow position:
               
chr20:17100302-17100518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 92
               

               
Conread position:
               
391-612
               

               
Cow position:
               
chr20:39962517-39962735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
137, 60
               

               
Conread position:
               
392-626
               

               
Cow position:
               
chr20:38514724-38514952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
139, 58
               

               
Conread position:
               
396-611
               

               
Cow position:
               
chr20:10772150-10772364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 82
               

               
Conread position:
               
405-610
               

               
Cow position:
               
chr20:4787058-4786860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
411-610
               

               
Cow position:
               
chr20:8620195-8619992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
45, 178
               

               
Conread position:
               
411-610
               

               
Cow position:
               
chr20:22030281-22030476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
412-612
               

               
Cow position:
               
chr20:21999960-22000159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
415-599
               

               
Cow position:
               
chr20:6358580-6358767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
415-611
               

               
Cow position:
               
chr20:11359664-11359473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
420-610
               

               
Cow position:
               
chr20:6248633-6248443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
420-614
               

               
Cow position:
               
chr20:19060869-19060677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
420-620
               

               
Cow position:
               
chr20:21815531-21815729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
424-610
               

               
Cow position:
               
chr20:30888007-30888193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
428-605
               

               
Cow position:
               
chr20:14620331-14620148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
441-586
               

               
Cow position:
               
chr20:1009715-1009572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
453-606
               

               
Cow position:
               
chr20:8817488-8817337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
454-620
               

               
Cow position:
               
chr20:20158140-20158304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 7
               

               
Conread position:
               
458-614
               

               
Cow position:
               
chr20:8912491-8912337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
461-630
               

               
Cow position:
               
chr20:15529870-15530038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
471-624
               

               
Cow position:
               
chr20:3148704-3148856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
482-609
               

               
Cow position:
               
chr20:35445074-35444946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
488-620
               

               
Cow position:
               
chr20:13805352-13805489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
490-607
               

               
Cow position:
               
chr20:11392814-11392931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
40, 110
               

               
Conread position:
               
493-608
               

               
Cow position:
               
chr20:24097041-24097157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
493-624
               

               
Cow position:
               
chr20:630565-630697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
494-621
               

               
Cow position:
               
chr20:19636135-19636007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
494-626
               

               
Cow position:
               
chr20:15766151-15766287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
494-626
               

               
Cow position:
               
chr20:26041057-26040924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
499-602
               

               
Cow position:
               
chr20:19834784-19834680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               
Show alignments to all cow chromosomes.