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Cow genome map

           
Conread name:
           
Ova1-OVRM10114A05
        

               
Conread position:
               
1-146
               

               
Cow position:
               
chr5:6576020-6575872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr5:69771718-69771873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr5:6670613-6670391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr5:35967743-35967972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
97, 156
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr5:59779616-59779319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
89, 136
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr5:59782217-59781920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
89, 136
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr5:19969490-19969113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 149
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr5:41980944-41981336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 104
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr5:25226125-25225700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
87, 178
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr5:40058120-40058513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 135
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr5:6219626-6220081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 305
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr5:42667849-42667399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr5:28330781-28330341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 57
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr5:70960606-70960136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 136
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr5:3242917-3242467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr5:72314912-72314434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
265, 132
               

               
Conread position:
               
1-564
               

               
Cow position:
               
chr5:24348666-24349202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
1-610
               

               
Cow position:
               
chr5:16206600-16206014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 139
               

               
Conread position:
               
1-613
               

               
Cow position:
               
chr5:37190546-37189953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
1-619
               

               
Cow position:
               
chr5:28224004-28224602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
1-622
               

               
Cow position:
               
chr5:35826142-35826754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 137
               

               
Conread position:
               
1-622
               

               
Cow position:
               
chr5:55176428-55177038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 122
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr5:4032469-4031824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 125
               

               
Conread position:
               
2-444
               

               
Cow position:
               
chr5:46653438-46653882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
76, 8
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr5:30816257-30816708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr5:38431609-38431813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
86, 146
               

               
Conread position:
               
4-565
               

               
Cow position:
               
chr5:16508631-16509202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
4-586
               

               
Cow position:
               
chr5:20408113-20407561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 133
               

               
Conread position:
               
4-600
               

               
Cow position:
               
chr5:27154569-27155136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
6-305
               

               
Cow position:
               
chr5:32809456-32809165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
87, 145
               

               
Conread position:
               
6-561
               

               
Cow position:
               
chr5:9873806-9874361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
7-132
               

               
Cow position:
               
chr5:52289329-52289457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
7-146
               

               
Cow position:
               
chr5:4348139-4347999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
7-146
               

               
Cow position:
               
chr5:12352518-12352374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
7-146
               

               
Cow position:
               
chr5:50483365-50483223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
7-147
               

               
Cow position:
               
chr5:6286796-6286652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
7-205
               

               
Cow position:
               
chr5:69460951-69461139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr5:34669522-34669320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 140
               

               
Conread position:
               
7-223
               

               
Cow position:
               
chr5:63388296-63388501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
82, 144
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr5:5826773-5826565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 144
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr5:16062262-16062059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
7-229
               

               
Cow position:
               
chr5:26156420-26156209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
83, 135
               

               
Conread position:
               
7-235
               

               
Cow position:
               
chr5:56433141-56433352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
7-247
               

               
Cow position:
               
chr5:5337655-5337426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
7-255
               

               
Cow position:
               
chr5:6032543-6032781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 144
               

               
Conread position:
               
7-259
               

               
Cow position:
               
chr5:15722747-15722506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
80, 145
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr5:39242797-39242516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr5:41976295-41976016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
84, 144
               

               
Conread position:
               
7-393
               

               
Cow position:
               
chr5:72046096-72045720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 95
               

               
Conread position:
               
7-398
               

               
Cow position:
               
chr5:14630360-14629973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 130
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr5:64844570-64844167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
7-426
               

               
Cow position:
               
chr5:49820690-49821106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
7-432
               

               
Cow position:
               
chr5:3500559-3500128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
83, 144
               

               
Conread position:
               
7-433
               

               
Cow position:
               
chr5:3281319-3280905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 119
               

               
Conread position:
               
7-435
               

               
Cow position:
               
chr5:44054486-44054067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 129
               

               
Conread position:
               
7-437
               

               
Cow position:
               
chr5:2428175-2427752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
7-440
               

               
Cow position:
               
chr5:411147-410717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 136
               

               
Conread position:
               
7-440
               

               
Cow position:
               
chr5:46104399-46103967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
142, 94
               

               
Conread position:
               
7-440
               

               
Cow position:
               
chr5:53184931-53184497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 126
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr5:12640681-12640259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
83, 132
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr5:34709340-34709774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr5:37736234-37736667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr5:51936709-51937137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
83, 144
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr5:61055081-61054660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 104
               

               
Conread position:
               
7-446
               

               
Cow position:
               
chr5:58004793-58005230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-457
               

               
Cow position:
               
chr5:15112682-15112235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-457
               

               
Cow position:
               
chr5:16184640-16185077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
7-457
               

               
Cow position:
               
chr5:24485866-24485447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
7-457
               

               
Cow position:
               
chr5:58460857-58460405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-458
               

               
Cow position:
               
chr5:59877190-59876741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-464
               

               
Cow position:
               
chr5:34115190-34115649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 107
               

               
Conread position:
               
7-464
               

               
Cow position:
               
chr5:47559988-47559541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-464
               

               
Cow position:
               
chr5:51309516-51309969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
7-464
               

               
Cow position:
               
chr5:55820927-55821372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 137
               

               
Conread position:
               
7-466
               

               
Cow position:
               
chr5:7921840-7921400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
142, 98
               

               
Conread position:
               
7-470
               

               
Cow position:
               
chr5:35144891-35145354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 96
               

               
Conread position:
               
7-475
               

               
Cow position:
               
chr5:54337471-54337920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-481
               

               
Cow position:
               
chr5:46732787-46732318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
7-482
               

               
Cow position:
               
chr5:2262823-2262357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
295, 127
               

               
Conread position:
               
7-482
               

               
Cow position:
               
chr5:26505855-26505383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-482
               

               
Cow position:
               
chr5:27548941-27548479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
83, 134
               

               
Conread position:
               
7-487
               

               
Cow position:
               
chr5:1338351-1337878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-487
               

               
Cow position:
               
chr5:58770299-58769825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
7-536
               

               
Cow position:
               
chr5:64823754-64823244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
7-552
               

               
Cow position:
               
chr5:34638441-34638967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 136
               

               
Conread position:
               
7-554
               

               
Cow position:
               
chr5:31145228-31144702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 106
               

               
Conread position:
               
7-560
               

               
Cow position:
               
chr5:45999475-45998930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
7-561
               

               
Cow position:
               
chr5:279607-279059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
83, 124
               

               
Conread position:
               
7-561
               

               
Cow position:
               
chr5:7397094-7397633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 99
               

               
Conread position:
               
7-561
               

               
Cow position:
               
chr5:47750498-47751043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-561
               

               
Cow position:
               
chr5:66816032-66815480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
7-562
               

               
Cow position:
               
chr5:63647919-63647384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 107
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr5:64321303-64321855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 14
               

               
Conread position:
               
7-571
               

               
Cow position:
               
chr5:25231460-25230910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 119
               

               
Conread position:
               
7-572
               

               
Cow position:
               
chr5:31470026-31469490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 127
               

               
Conread position:
               
7-572
               

               
Cow position:
               
chr5:59082644-59082091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 130
               

               
Conread position:
               
7-572
               

               
Cow position:
               
chr5:61576067-61576648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 153
               

               
Conread position:
               
7-575
               

               
Cow position:
               
chr5:47871497-47870936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 93
               

               
Conread position:
               
7-576
               

               
Cow position:
               
chr5:31097254-31096694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 95
               

               
Conread position:
               
7-580
               

               
Cow position:
               
chr5:64524333-64523752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 119
               

               
Conread position:
               
7-596
               

               
Cow position:
               
chr5:58855653-58856229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
7-599
               

               
Cow position:
               
chr5:15598685-15598108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
7-602
               

               
Cow position:
               
chr5:53835243-53835849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
7-605
               

               
Cow position:
               
chr5:26378120-26377532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
7-605
               

               
Cow position:
               
chr5:29903974-29903387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
7-605
               

               
Cow position:
               
chr5:30302446-30303027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 130
               

               
Conread position:
               
7-605
               

               
Cow position:
               
chr5:56467253-56467825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 144
               

               
Conread position:
               
7-607
               

               
Cow position:
               
chr5:72007328-72006727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 153
               

               
Conread position:
               
7-608
               

               
Cow position:
               
chr5:14904508-14903929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
7-608
               

               
Cow position:
               
chr5:17027637-17028234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 139
               

               
Conread position:
               
7-608
               

               
Cow position:
               
chr5:37377417-37377992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
7-608
               

               
Cow position:
               
chr5:37645614-37646220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
7-610
               

               
Cow position:
               
chr5:4166220-4166781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 95
               

               
Conread position:
               
7-610
               

               
Cow position:
               
chr5:29771069-29771669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
7-610
               

               
Cow position:
               
chr5:74644112-74643537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 131
               

               
Conread position:
               
7-616
               

               
Cow position:
               
chr5:27615042-27615658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
79, 95
               

               
Conread position:
               
7-617
               

               
Cow position:
               
chr5:74015491-74016088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
7-618
               

               
Cow position:
               
chr5:55942849-55942230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
7-620
               

               
Cow position:
               
chr5:39447986-39447381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 129
               

               
Conread position:
               
7-620
               

               
Cow position:
               
chr5:44848466-44847870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 148
               

               
Conread position:
               
7-621
               

               
Cow position:
               
chr5:8821439-8820861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 95
               

               
Conread position:
               
7-622
               

               
Cow position:
               
chr5:26096844-26097441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
7-622
               

               
Cow position:
               
chr5:30276250-30276843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 85
               

               
Conread position:
               
7-623
               

               
Cow position:
               
chr5:66366082-66366669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 123
               

               
Conread position:
               
7-624
               

               
Cow position:
               
chr5:12323247-12322652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
7-624
               

               
Cow position:
               
chr5:45846144-45845533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
7-624
               

               
Cow position:
               
chr5:50599619-50600203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 80
               

               
Conread position:
               
7-624
               

               
Cow position:
               
chr5:66257196-66257791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 128
               

               
Conread position:
               
7-624
               

               
Cow position:
               
chr5:67932921-67932319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 35
               

               
Conread position:
               
7-626
               

               
Cow position:
               
chr5:6044834-6045453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 129
               

               
Conread position:
               
7-626
               

               
Cow position:
               
chr5:21828404-21829024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 144
               

               
Conread position:
               
7-627
               

               
Cow position:
               
chr5:35207809-35208419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
7-628
               

               
Cow position:
               
chr5:26467170-26467787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 129
               

               
Conread position:
               
7-628
               

               
Cow position:
               
chr5:29827601-29828203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 134
               

               
Conread position:
               
7-630
               

               
Cow position:
               
chr5:51151813-51151198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
7-631
               

               
Cow position:
               
chr5:52165631-52165017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 117
               

               
Conread position:
               
8-443
               

               
Cow position:
               
chr5:54868966-54869395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
8-455
               

               
Cow position:
               
chr5:7140533-7140120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
8-456
               

               
Cow position:
               
chr5:54714193-54713742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
8-459
               

               
Cow position:
               
chr5:19470628-19470198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
8-466
               

               
Cow position:
               
chr5:9074184-9073731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
8-466
               

               
Cow position:
               
chr5:37942240-37941793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
8-482
               

               
Cow position:
               
chr5:58245905-58246378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
82, 127
               

               
Conread position:
               
8-505
               

               
Cow position:
               
chr5:62827205-62826717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 118
               

               
Conread position:
               
8-523
               

               
Cow position:
               
chr5:10261694-10261180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 96
               

               
Conread position:
               
8-561
               

               
Cow position:
               
chr5:34528127-34528639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 28
               

               
Conread position:
               
8-600
               

               
Cow position:
               
chr5:44752770-44752176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 97
               

               
Conread position:
               
8-605
               

               
Cow position:
               
chr5:8024644-8024064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 138
               

               
Conread position:
               
8-608
               

               
Cow position:
               
chr5:3582126-3582699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 122
               

               
Conread position:
               
8-608
               

               
Cow position:
               
chr5:15363443-15364021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
8-610
               

               
Cow position:
               
chr5:16894220-16893631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
8-623
               

               
Cow position:
               
chr5:55233220-55232659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 141
               

               
Conread position:
               
8-627
               

               
Cow position:
               
chr5:18573719-18574332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 129
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr5:32088210-32087998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 142
               

               
Conread position:
               
9-325
               

               
Cow position:
               
chr5:60447797-60448101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
9-442
               

               
Cow position:
               
chr5:13909056-13908638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
81, 132
               

               
Conread position:
               
9-458
               

               
Cow position:
               
chr5:17982838-17982397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
81, 121
               

               
Conread position:
               
9-465
               

               
Cow position:
               
chr5:3696518-3696963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
9-466
               

               
Cow position:
               
chr5:76097914-76097467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 127
               

               
Conread position:
               
9-477
               

               
Cow position:
               
chr5:70290034-70290488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 129
               

               
Conread position:
               
9-528
               

               
Cow position:
               
chr5:14141239-14141749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 59
               

               
Conread position:
               
9-530
               

               
Cow position:
               
chr5:54405345-54404830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 137
               

               
Conread position:
               
9-600
               

               
Cow position:
               
chr5:4218433-4218988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 113
               

               
Conread position:
               
9-609
               

               
Cow position:
               
chr5:41546341-41545753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 129
               

               
Conread position:
               
10-487
               

               
Cow position:
               
chr5:8178733-8179203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
80, 120
               

               
Conread position:
               
10-554
               

               
Cow position:
               
chr5:46122763-46122268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
309, 8
               

               
Conread position:
               
10-561
               

               
Cow position:
               
chr5:34612349-34612893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
139, 90
               

               
Conread position:
               
10-608
               

               
Cow position:
               
chr5:7192987-7193555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
10-610
               

               
Cow position:
               
chr5:65776845-65776243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
10-624
               

               
Cow position:
               
chr5:47601362-47601967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 127
               

               
Conread position:
               
10-626
               

               
Cow position:
               
chr5:57074765-57074173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 127
               

               
Conread position:
               
10-631
               

               
Cow position:
               
chr5:3204391-3204988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
11-434
               

               
Cow position:
               
chr5:50863905-50864331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
141, 49
               

               
Conread position:
               
11-599
               

               
Cow position:
               
chr5:36406721-36407281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 146
               

               
Conread position:
               
12-387
               

               
Cow position:
               
chr5:34923572-34923193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 198
               

               
Conread position:
               
12-611
               

               
Cow position:
               
chr5:17087468-17086879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 40
               

               
Conread position:
               
13-621
               

               
Cow position:
               
chr5:19813667-19813069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 125
               

               
Conread position:
               
14-581
               

               
Cow position:
               
chr5:35762846-35763374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
17-561
               

               
Cow position:
               
chr5:26647275-26647816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
19-236
               

               
Cow position:
               
chr5:34885847-34885645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 118
               

               
Conread position:
               
19-274
               

               
Cow position:
               
chr5:28456953-28456712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
71, 132
               

               
Conread position:
               
19-274
               

               
Cow position:
               
chr5:28460255-28460014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
71, 132
               

               
Conread position:
               
19-444
               

               
Cow position:
               
chr5:48972151-48972574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
19-457
               

               
Cow position:
               
chr5:65933373-65932938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 111
               

               
Conread position:
               
19-536
               

               
Cow position:
               
chr5:2500633-2500112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
67, 107
               

               
Conread position:
               
19-561
               

               
Cow position:
               
chr5:59758954-59759491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 119
               

               
Conread position:
               
19-605
               

               
Cow position:
               
chr5:50821349-50821919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
19-608
               

               
Cow position:
               
chr5:14314083-14314667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 115
               

               
Conread position:
               
19-624
               

               
Cow position:
               
chr5:21617025-21617612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 115
               

               
Conread position:
               
20-486
               

               
Cow position:
               
chr5:49558723-49559184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
20-572
               

               
Cow position:
               
chr5:45705592-45706137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 390
               

               
Conread position:
               
21-599
               

               
Cow position:
               
chr5:57935543-57934978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 68
               

               
Conread position:
               
21-605
               

               
Cow position:
               
chr5:46510306-46509728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 116
               

               
Conread position:
               
22-610
               

               
Cow position:
               
chr5:69337377-69337961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 184
               

               
Conread position:
               
24-518
               

               
Cow position:
               
chr5:6087000-6086512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
25-516
               

               
Cow position:
               
chr5:27015259-27015726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 112
               

               
Conread position:
               
27-466
               

               
Cow position:
               
chr5:29504670-29505108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
28-343
               

               
Cow position:
               
chr5:64122487-64122166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
28-600
               

               
Cow position:
               
chr5:6528250-6528816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
32-570
               

               
Cow position:
               
chr5:61839759-61840289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
34-616
               

               
Cow position:
               
chr5:55068297-55068853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
36-440
               

               
Cow position:
               
chr5:12672448-12672057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
36-457
               

               
Cow position:
               
chr5:14420768-14420353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 101
               

               
Conread position:
               
36-466
               

               
Cow position:
               
chr5:41532597-41532166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 6
               

               
Conread position:
               
36-608
               

               
Cow position:
               
chr5:41604183-41604762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
232, 61
               

               
Conread position:
               
38-440
               

               
Cow position:
               
chr5:9385408-9385022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
38-482
               

               
Cow position:
               
chr5:36793609-36794051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
39-572
               

               
Cow position:
               
chr5:33414825-33414308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
39-613
               

               
Cow position:
               
chr5:56523754-56524318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
42-580
               

               
Cow position:
               
chr5:41608890-41609395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
43-631
               

               
Cow position:
               
chr5:63987884-63987283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
45-482
               

               
Cow position:
               
chr5:20411052-20410615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
45, 92
               

               
Conread position:
               
50-466
               

               
Cow position:
               
chr5:4388944-4389351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
54-603
               

               
Cow position:
               
chr5:21040379-21039849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
58-620
               

               
Cow position:
               
chr5:62172005-62172561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
61-465
               

               
Cow position:
               
chr5:55428158-55428557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
61-482
               

               
Cow position:
               
chr5:42777376-42777779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
64-458
               

               
Cow position:
               
chr5:6986763-6987154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
69-444
               

               
Cow position:
               
chr5:14557617-14557256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
69-454
               

               
Cow position:
               
chr5:44583504-44583141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
76-614
               

               
Cow position:
               
chr5:72564376-72564909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
93-457
               

               
Cow position:
               
chr5:40357250-40356875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
93-610
               

               
Cow position:
               
chr5:34442156-34441640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 41
               

               
Conread position:
               
98-580
               

               
Cow position:
               
chr5:52645459-52644969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 263
               

               
Conread position:
               
98-625
               

               
Cow position:
               
chr5:9894482-9893968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 36
               

               
Conread position:
               
100-584
               

               
Cow position:
               
chr5:41129398-41129857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
103-457
               

               
Cow position:
               
chr5:32963998-32963641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
107-476
               

               
Cow position:
               
chr5:34915777-34916144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
130-475
               

               
Cow position:
               
chr5:5685399-5685049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
131-581
               

               
Cow position:
               
chr5:38805686-38805233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 256
               

               
Conread position:
               
138-600
               

               
Cow position:
               
chr5:44797048-44796602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
140-434
               

               
Cow position:
               
chr5:62678327-62678629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
140-444
               

               
Cow position:
               
chr5:33792298-33792598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
140-465
               

               
Cow position:
               
chr5:36679777-36679437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
140-466
               

               
Cow position:
               
chr5:55430304-55430639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
140-561
               

               
Cow position:
               
chr5:63103580-63104006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 315
               

               
Conread position:
               
140-570
               

               
Cow position:
               
chr5:35209803-35209376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 124
               

               
Conread position:
               
140-600
               

               
Cow position:
               
chr5:53841953-53842425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
140-627
               

               
Cow position:
               
chr5:43858759-43858262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 170
               

               
Conread position:
               
140-631
               

               
Cow position:
               
chr5:4710475-4709990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 91
               

               
Conread position:
               
142-625
               

               
Cow position:
               
chr5:68718562-68719024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
461, 72
               

               
Conread position:
               
144-571
               

               
Cow position:
               
chr5:73967759-73967330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 311
               

               
Conread position:
               
145-367
               

               
Cow position:
               
chr5:60015596-60015823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
184, 121
               

               
Conread position:
               
145-610
               

               
Cow position:
               
chr5:67212055-67212501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 83
               

               
Conread position:
               
145-613
               

               
Cow position:
               
chr5:47317293-47316830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
145-622
               

               
Cow position:
               
chr5:39936778-39937268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 258
               

               
Conread position:
               
146-466
               

               
Cow position:
               
chr5:43990069-43990397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
121, 149
               

               
Conread position:
               
147-505
               

               
Cow position:
               
chr5:7763754-7764111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
120, 69
               

               
Conread position:
               
148-465
               

               
Cow position:
               
chr5:51357824-51357502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 91
               

               
Conread position:
               
148-471
               

               
Cow position:
               
chr5:60519853-60520167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 75
               

               
Conread position:
               
148-528
               

               
Cow position:
               
chr5:46052126-46051739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
181, 323
               

               
Conread position:
               
148-602
               

               
Cow position:
               
chr5:20783305-20783755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 52
               

               
Conread position:
               
148-610
               

               
Cow position:
               
chr5:44994367-44993908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 288
               

               
Conread position:
               
149-465
               

               
Cow position:
               
chr5:34288788-34288474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 67
               

               
Conread position:
               
149-599
               

               
Cow position:
               
chr5:28927918-28927464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 340
               

               
Conread position:
               
149-600
               

               
Cow position:
               
chr5:60715676-60715237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 61
               

               
Conread position:
               
149-608
               

               
Cow position:
               
chr5:26990077-26990527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
149-608
               

               
Cow position:
               
chr5:39258233-39258644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
233, 44
               

               
Conread position:
               
149-626
               

               
Cow position:
               
chr5:61725650-61726118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 44
               

               
Conread position:
               
150-378
               

               
Cow position:
               
chr5:21937726-21937498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 124
               

               
Conread position:
               
150-459
               

               
Cow position:
               
chr5:47313153-47313468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
150-487
               

               
Cow position:
               
chr5:19300100-19299758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
117, 304
               

               
Conread position:
               
150-509
               

               
Cow position:
               
chr5:61030549-61030183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
116, 248
               

               
Conread position:
               
150-586
               

               
Cow position:
               
chr5:58793934-58793490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 33
               

               
Conread position:
               
150-596
               

               
Cow position:
               
chr5:45226149-45225691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
150-610
               

               
Cow position:
               
chr5:54311003-54311477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 152
               

               
Conread position:
               
150-614
               

               
Cow position:
               
chr5:66338766-66339220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 67
               

               
Conread position:
               
150-622
               

               
Cow position:
               
chr5:62107809-62107333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
151-487
               

               
Cow position:
               
chr5:10922865-10923204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
151-527
               

               
Cow position:
               
chr5:12146374-12146754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
151-603
               

               
Cow position:
               
chr5:74003965-74003501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 192
               

               
Conread position:
               
152-457
               

               
Cow position:
               
chr5:42747844-42748147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
199, 48
               

               
Conread position:
               
152-487
               

               
Cow position:
               
chr5:49116654-49116311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
152-572
               

               
Cow position:
               
chr5:12149228-12149649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 186
               

               
Conread position:
               
154-572
               

               
Cow position:
               
chr5:18702525-18702117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
155-487
               

               
Cow position:
               
chr5:56234143-56233808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 20
               

               
Conread position:
               
155-627
               

               
Cow position:
               
chr5:5111392-5110911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 216
               

               
Conread position:
               
156-624
               

               
Cow position:
               
chr5:65941566-65941096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
157-472
               

               
Cow position:
               
chr5:41229398-41229711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 145
               

               
Conread position:
               
157-487
               

               
Cow position:
               
chr5:40831000-40831329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
110, 129
               

               
Conread position:
               
158-444
               

               
Cow position:
               
chr5:53735875-53736163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 16
               

               
Conread position:
               
158-472
               

               
Cow position:
               
chr5:4797625-4797310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 176
               

               
Conread position:
               
161-465
               

               
Cow position:
               
chr5:64392845-64393156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
162-624
               

               
Cow position:
               
chr5:65752551-65753014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 83
               

               
Conread position:
               
163-564
               

               
Cow position:
               
chr5:50483169-50482765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
104, 184
               

               
Conread position:
               
164-628
               

               
Cow position:
               
chr5:53055859-53055402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 132
               

               
Conread position:
               
166-482
               

               
Cow position:
               
chr5:73484890-73484567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
167-365
               

               
Cow position:
               
chr5:42671331-42671142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
115, 64
               

               
Conread position:
               
172-572
               

               
Cow position:
               
chr5:33661556-33661949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
89, 237
               

               
Conread position:
               
173-597
               

               
Cow position:
               
chr5:63964478-63964037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
68, 279
               

               
Conread position:
               
174-455
               

               
Cow position:
               
chr5:75829027-75828752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
154, 42
               

               
Conread position:
               
174-561
               

               
Cow position:
               
chr5:37653984-37654376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 156
               

               
Conread position:
               
183-433
               

               
Cow position:
               
chr5:63917694-63917444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
149, 45
               

               
Conread position:
               
183-460
               

               
Cow position:
               
chr5:43474567-43474840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
183-466
               

               
Cow position:
               
chr5:62173386-62173673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
84, 182
               

               
Conread position:
               
183-466
               

               
Cow position:
               
chr5:63566019-63566311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
183-612
               

               
Cow position:
               
chr5:9090307-9089885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 36
               

               
Conread position:
               
184-453
               

               
Cow position:
               
chr5:9859999-9859728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
184-457
               

               
Cow position:
               
chr5:50950267-50950544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
184-631
               

               
Cow position:
               
chr5:50533667-50533226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
185-608
               

               
Cow position:
               
chr5:57327503-57327938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
189-438
               

               
Cow position:
               
chr5:52905769-52905522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
189-561
               

               
Cow position:
               
chr5:29680797-29681190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
78, 127
               

               
Conread position:
               
191-624
               

               
Cow position:
               
chr5:12352061-12351656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 121
               

               
Conread position:
               
192-474
               

               
Cow position:
               
chr5:59298237-59297952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 215
               

               
Conread position:
               
192-628
               

               
Cow position:
               
chr5:6504148-6503722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
140, 53
               

               
Conread position:
               
194-595
               

               
Cow position:
               
chr5:31640151-31640551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 189
               

               
Conread position:
               
196-422
               

               
Cow position:
               
chr5:29366734-29366966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 5
               

               
Conread position:
               
200-561
               

               
Cow position:
               
chr5:65601193-65601549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
201-556
               

               
Cow position:
               
chr5:48868016-48867667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
201-628
               

               
Cow position:
               
chr5:17999765-17999337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 276
               

               
Conread position:
               
202-466
               

               
Cow position:
               
chr5:61543682-61543950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
65, 248
               

               
Conread position:
               
202-607
               

               
Cow position:
               
chr5:19278961-19278569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
203-603
               

               
Cow position:
               
chr5:63992431-63992038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 198
               

               
Conread position:
               
204-615
               

               
Cow position:
               
chr5:64139297-64139707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 242
               

               
Conread position:
               
207-572
               

               
Cow position:
               
chr5:34049846-34050221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 279
               

               
Conread position:
               
208-434
               

               
Cow position:
               
chr5:37366628-37366868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
208-570
               

               
Cow position:
               
chr5:62870297-62869941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 68
               

               
Conread position:
               
211-620
               

               
Cow position:
               
chr5:41164831-41165239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
212-459
               

               
Cow position:
               
chr5:3491943-3492187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
49, 137
               

               
Conread position:
               
212-466
               

               
Cow position:
               
chr5:65924959-65924692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr5:28035446-28035636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
218-457
               

               
Cow position:
               
chr5:6575834-6575601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
151, 6
               

               
Conread position:
               
219-610
               

               
Cow position:
               
chr5:59326079-59325700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
168, 115
               

               
Conread position:
               
219-621
               

               
Cow position:
               
chr5:61488362-61487961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
220-618
               

               
Cow position:
               
chr5:28302990-28302594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 154
               

               
Conread position:
               
221-607
               

               
Cow position:
               
chr5:65588463-65588838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 42
               

               
Conread position:
               
222-440
               

               
Cow position:
               
chr5:63388547-63388767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 6
               

               
Conread position:
               
227-416
               

               
Cow position:
               
chr5:39419026-39418840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 158
               

               
Conread position:
               
227-600
               

               
Cow position:
               
chr5:51999976-52000349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 255
               

               
Conread position:
               
227-610
               

               
Cow position:
               
chr5:40109258-40109633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
227-610
               

               
Cow position:
               
chr5:49685524-49685136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
39, 246
               

               
Conread position:
               
227-610
               

               
Cow position:
               
chr5:54350604-54350220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
227-613
               

               
Cow position:
               
chr5:1344101-1343712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
227-616
               

               
Cow position:
               
chr5:43929977-43929589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 145
               

               
Conread position:
               
227-631
               

               
Cow position:
               
chr5:55967126-55966721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 238
               

               
Conread position:
               
231-433
               

               
Cow position:
               
chr5:54064540-54064747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
232-455
               

               
Cow position:
               
chr5:58144844-58144613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
232-464
               

               
Cow position:
               
chr5:56433563-56433801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
232-610
               

               
Cow position:
               
chr5:38832879-38833262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 197
               

               
Conread position:
               
232-611
               

               
Cow position:
               
chr5:30844874-30845250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
232-612
               

               
Cow position:
               
chr5:11668416-11668042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
155, 102
               

               
Conread position:
               
232-614
               

               
Cow position:
               
chr5:25035465-25035113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
233-618
               

               
Cow position:
               
chr5:37646789-37646395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 136
               

               
Conread position:
               
235-457
               

               
Cow position:
               
chr5:45036785-45037011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 159
               

               
Conread position:
               
235-596
               

               
Cow position:
               
chr5:42744562-42744907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
290, 28
               

               
Conread position:
               
235-602
               

               
Cow position:
               
chr5:37814388-37814759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
235-602
               

               
Cow position:
               
chr5:57626574-57626921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
235-607
               

               
Cow position:
               
chr5:29353364-29352989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
235-613
               

               
Cow position:
               
chr5:17063329-17062937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
27, 362
               

               
Conread position:
               
237-616
               

               
Cow position:
               
chr5:41636640-41637010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
238-474
               

               
Cow position:
               
chr5:63236090-63235843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
238-549
               

               
Cow position:
               
chr5:3627400-3627075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
26, 185
               

               
Conread position:
               
238-609
               

               
Cow position:
               
chr5:43992093-43992464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
238-610
               

               
Cow position:
               
chr5:36854980-36855347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
238-622
               

               
Cow position:
               
chr5:32339207-32338813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 202
               

               
Conread position:
               
238-630
               

               
Cow position:
               
chr5:24996456-24996062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
239-572
               

               
Cow position:
               
chr5:64137020-64137359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
21, 243
               

               
Conread position:
               
239-600
               

               
Cow position:
               
chr5:20779611-20779267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
292, 24
               

               
Conread position:
               
239-610
               

               
Cow position:
               
chr5:11229905-11229532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 222
               

               
Conread position:
               
240-628
               

               
Cow position:
               
chr5:30253515-30253900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
241-621
               

               
Cow position:
               
chr5:54086311-54086690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
244-617
               

               
Cow position:
               
chr5:5257523-5257140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
245-466
               

               
Cow position:
               
chr5:73252871-73253093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
245-509
               

               
Cow position:
               
chr5:37714130-37713855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 175
               

               
Conread position:
               
245-549
               

               
Cow position:
               
chr5:28926410-28926100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
245-565
               

               
Cow position:
               
chr5:56820485-56820168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
245-605
               

               
Cow position:
               
chr5:16938233-16937880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
245-606
               

               
Cow position:
               
chr5:15426303-15426675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
245-610
               

               
Cow position:
               
chr5:25495563-25495217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
245-610
               

               
Cow position:
               
chr5:64176346-64175985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
20, 205
               

               
Conread position:
               
245-624
               

               
Cow position:
               
chr5:35684709-35685090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 163
               

               
Conread position:
               
245-624
               

               
Cow position:
               
chr5:56070628-56071015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
245-630
               

               
Cow position:
               
chr5:34300700-34301077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
245-631
               

               
Cow position:
               
chr5:27306093-27306468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
246-608
               

               
Cow position:
               
chr5:27411614-27411262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
247-457
               

               
Cow position:
               
chr5:51490977-51490768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
247-605
               

               
Cow position:
               
chr5:15722277-15721938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
284, 69
               

               
Conread position:
               
251-451
               

               
Cow position:
               
chr5:54530763-54530961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 145
               

               
Conread position:
               
251-608
               

               
Cow position:
               
chr5:1950279-1949919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
251-608
               

               
Cow position:
               
chr5:16025680-16025329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 180
               

               
Conread position:
               
251-610
               

               
Cow position:
               
chr5:56028749-56028400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 179
               

               
Conread position:
               
251-613
               

               
Cow position:
               
chr5:7723453-7723809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
251-618
               

               
Cow position:
               
chr5:72895473-72895835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
252-600
               

               
Cow position:
               
chr5:62142452-62142807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 160
               

               
Conread position:
               
253-519
               

               
Cow position:
               
chr5:60126156-60126422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
14, 114
               

               
Conread position:
               
253-551
               

               
Cow position:
               
chr5:63185469-63185172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
254-451
               

               
Cow position:
               
chr5:5848403-5848205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
254-573
               

               
Cow position:
               
chr5:4617157-4617470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
255-464
               

               
Cow position:
               
chr5:62027161-62026951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 147
               

               
Conread position:
               
256-527
               

               
Cow position:
               
chr5:35235923-35235652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
10, 148
               

               
Conread position:
               
259-496
               

               
Cow position:
               
chr5:29212738-29212977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
90, 78
               

               
Conread position:
               
259-600
               

               
Cow position:
               
chr5:64758973-64758636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
260-465
               

               
Cow position:
               
chr5:47547926-47547719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
260-561
               

               
Cow position:
               
chr5:48154682-48154373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
121, 64
               

               
Conread position:
               
260-565
               

               
Cow position:
               
chr5:40039980-40039670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
90, 220
               

               
Conread position:
               
260-594
               

               
Cow position:
               
chr5:57736905-57737224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
271, 74
               

               
Conread position:
               
260-604
               

               
Cow position:
               
chr5:45803851-45804195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 61
               

               
Conread position:
               
260-610
               

               
Cow position:
               
chr5:35969333-35969673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 142
               

               
Conread position:
               
260-624
               

               
Cow position:
               
chr5:26262883-26262526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
260-630
               

               
Cow position:
               
chr5:71494607-71494982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
47, 170
               

               
Conread position:
               
263-487
               

               
Cow position:
               
chr5:71578965-71579194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 208
               

               
Conread position:
               
263-572
               

               
Cow position:
               
chr5:44049496-44049801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
117, 88
               

               
Conread position:
               
263-610
               

               
Cow position:
               
chr5:51053854-51053508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
264-466
               

               
Cow position:
               
chr5:8994771-8994568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
69, 121
               

               
Conread position:
               
265-544
               

               
Cow position:
               
chr5:35449049-35449311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
68, 149
               

               
Conread position:
               
265-608
               

               
Cow position:
               
chr5:50943359-50943017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 205
               

               
Conread position:
               
266-572
               

               
Cow position:
               
chr5:57591486-57591791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 128
               

               
Conread position:
               
266-620
               

               
Cow position:
               
chr5:458278-458639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
63, 205
               

               
Conread position:
               
269-470
               

               
Cow position:
               
chr5:1027892-1027689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
270-561
               

               
Cow position:
               
chr5:45409126-45409415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
270-599
               

               
Cow position:
               
chr5:56518409-56518092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 191
               

               
Conread position:
               
270-607
               

               
Cow position:
               
chr5:23169018-23168688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 63
               

               
Conread position:
               
271-596
               

               
Cow position:
               
chr5:57575567-57575900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 229
               

               
Conread position:
               
272-617
               

               
Cow position:
               
chr5:69731320-69731648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
274-605
               

               
Cow position:
               
chr5:7044905-7044569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
274-622
               

               
Cow position:
               
chr5:34561813-34562169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 200
               

               
Conread position:
               
276-608
               

               
Cow position:
               
chr5:22643411-22643093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 125
               

               
Conread position:
               
276-613
               

               
Cow position:
               
chr5:50215752-50215420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
279-620
               

               
Cow position:
               
chr5:69461144-69461486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
279-631
               

               
Cow position:
               
chr5:4220790-4221139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
54, 180
               

               
Conread position:
               
280-547
               

               
Cow position:
               
chr5:66403954-66404211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 118
               

               
Conread position:
               
280-596
               

               
Cow position:
               
chr5:48010036-48009732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 185
               

               
Conread position:
               
280-628
               

               
Cow position:
               
chr5:7755742-7755407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 44
               

               
Conread position:
               
288-434
               

               
Cow position:
               
chr5:57576032-57576183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
288-610
               

               
Cow position:
               
chr5:37808846-37808522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
288-623
               

               
Cow position:
               
chr5:17768325-17767996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
291-599
               

               
Cow position:
               
chr5:34624790-34625090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
291-614
               

               
Cow position:
               
chr5:44028480-44028164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 112
               

               
Conread position:
               
294-603
               

               
Cow position:
               
chr5:59115205-59115514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 183
               

               
Conread position:
               
297-614
               

               
Cow position:
               
chr5:14629987-14629660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
297-630
               

               
Cow position:
               
chr5:11540216-11539895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
299-565
               

               
Cow position:
               
chr5:69520720-69520987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
299-573
               

               
Cow position:
               
chr5:45472095-45472391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 186
               

               
Conread position:
               
299-605
               

               
Cow position:
               
chr5:41010167-41009864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 118
               

               
Conread position:
               
299-621
               

               
Cow position:
               
chr5:56317124-56317441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
30, 112
               

               
Conread position:
               
299-624
               

               
Cow position:
               
chr5:3549948-3549646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
181, 35
               

               
Conread position:
               
299-629
               

               
Cow position:
               
chr5:65136113-65136423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
300-608
               

               
Cow position:
               
chr5:62638736-62639043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 179
               

               
Conread position:
               
300-610
               

               
Cow position:
               
chr5:74580623-74580930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
301-610
               

               
Cow position:
               
chr5:30950088-30949774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 135
               

               
Conread position:
               
302-581
               

               
Cow position:
               
chr5:55928775-55929056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
302-608
               

               
Cow position:
               
chr5:41452834-41452533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
303-605
               

               
Cow position:
               
chr5:6286593-6286297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
29, 137
               

               
Conread position:
               
303-630
               

               
Cow position:
               
chr5:30629324-30628996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 129
               

               
Conread position:
               
304-602
               

               
Cow position:
               
chr5:65967897-65967598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
304-624
               

               
Cow position:
               
chr5:55955740-55956067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
306-480
               

               
Cow position:
               
chr5:41486901-41486724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
306-608
               

               
Cow position:
               
chr5:16214524-16214826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
306-608
               

               
Cow position:
               
chr5:54060110-54060415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 143
               

               
Conread position:
               
306-628
               

               
Cow position:
               
chr5:46512930-46512609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 158
               

               
Conread position:
               
307-613
               

               
Cow position:
               
chr5:57768135-57767843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
309-608
               

               
Cow position:
               
chr5:46426011-46425716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
309-624
               

               
Cow position:
               
chr5:45397418-45397724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 104
               

               
Conread position:
               
309-628
               

               
Cow position:
               
chr5:35247271-35246951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
319-572
               

               
Cow position:
               
chr5:61809834-61809583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
319-576
               

               
Cow position:
               
chr5:39333688-39333424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
319-610
               

               
Cow position:
               
chr5:45574475-45574761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
319-624
               

               
Cow position:
               
chr5:12673610-12673323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
320-608
               

               
Cow position:
               
chr5:36039151-36038862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 95
               

               
Conread position:
               
321-610
               

               
Cow position:
               
chr5:44447011-44446724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 10
               

               
Conread position:
               
324-569
               

               
Cow position:
               
chr5:63865650-63865896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
10, 160
               

               
Conread position:
               
324-581
               

               
Cow position:
               
chr5:65883921-65883660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 161
               

               
Conread position:
               
324-608
               

               
Cow position:
               
chr5:39874980-39875263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
324-610
               

               
Cow position:
               
chr5:70952021-70951749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
8, 136
               

               
Conread position:
               
324-623
               

               
Cow position:
               
chr5:66972282-66972583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
328-608
               

               
Cow position:
               
chr5:23529412-23529144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
331-614
               

               
Cow position:
               
chr5:57101912-57101638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
333-602
               

               
Cow position:
               
chr5:64027142-64026886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 129
               

               
Conread position:
               
334-608
               

               
Cow position:
               
chr5:47696572-47696311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
183, 12
               

               
Conread position:
               
334-610
               

               
Cow position:
               
chr5:20422318-20422053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
334-616
               

               
Cow position:
               
chr5:72951706-72951991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
35, 148
               

               
Conread position:
               
334-626
               

               
Cow position:
               
chr5:991333-991631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
195, 123
               

               
Conread position:
               
334-627
               

               
Cow position:
               
chr5:14473548-14473245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
337-608
               

               
Cow position:
               
chr5:42050421-42050690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 93
               

               
Conread position:
               
337-608
               

               
Cow position:
               
chr5:44726456-44726195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
194, 123
               

               
Conread position:
               
337-610
               

               
Cow position:
               
chr5:63427136-63426864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
337-614
               

               
Cow position:
               
chr5:56877358-56877627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
207, 52
               

               
Conread position:
               
337-625
               

               
Cow position:
               
chr5:56548449-56548726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
337-630
               

               
Cow position:
               
chr5:54768040-54767748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
39, 135
               

               
Conread position:
               
340-599
               

               
Cow position:
               
chr5:60747403-60747151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
138, 21
               

               
Conread position:
               
340-620
               

               
Cow position:
               
chr5:12434409-12434694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
127, 19
               

               
Conread position:
               
341-600
               

               
Cow position:
               
chr5:56680121-56680387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
41, 138
               

               
Conread position:
               
342-622
               

               
Cow position:
               
chr5:22666968-22667225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
189, 60
               

               
Conread position:
               
344-631
               

               
Cow position:
               
chr5:64592215-64591933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
346-549
               

               
Cow position:
               
chr5:50799419-50799614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
183, 64
               

               
Conread position:
               
348-600
               

               
Cow position:
               
chr5:16179644-16179380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
348-606
               

               
Cow position:
               
chr5:49440991-49440734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
144, 74
               

               
Conread position:
               
348-616
               

               
Cow position:
               
chr5:60599304-60599056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
351-602
               

               
Cow position:
               
chr5:13717687-13717438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 106
               

               
Conread position:
               
352-622
               

               
Cow position:
               
chr5:12901800-12902070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
353-607
               

               
Cow position:
               
chr5:49474659-49474406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
353-622
               

               
Cow position:
               
chr5:33560848-33560581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 116
               

               
Conread position:
               
353-622
               

               
Cow position:
               
chr5:38076597-38076329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
353-631
               

               
Cow position:
               
chr5:53710808-53710527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
29, 133
               

               
Conread position:
               
355-572
               

               
Cow position:
               
chr5:19523785-19524003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
355-605
               

               
Cow position:
               
chr5:42670968-42670728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
174, 52
               

               
Conread position:
               
355-607
               

               
Cow position:
               
chr5:58446691-58446945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
84, 119
               

               
Conread position:
               
355-613
               

               
Cow position:
               
chr5:7697893-7698144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
174, 106
               

               
Conread position:
               
355-618
               

               
Cow position:
               
chr5:60016055-60016313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
357-609
               

               
Cow position:
               
chr5:23678814-23678563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
357-610
               

               
Cow position:
               
chr5:60183691-60183947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
100, 126
               

               
Conread position:
               
358-610
               

               
Cow position:
               
chr5:35125945-35126196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
137, 9
               

               
Conread position:
               
358-611
               

               
Cow position:
               
chr5:14921039-14920788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
107, 78
               

               
Conread position:
               
360-572
               

               
Cow position:
               
chr5:43371305-43371092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
361-600
               

               
Cow position:
               
chr5:41293974-41294212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 121
               

               
Conread position:
               
364-610
               

               
Cow position:
               
chr5:54375610-54375361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 107
               

               
Conread position:
               
364-626
               

               
Cow position:
               
chr5:12557395-12557130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 97
               

               
Conread position:
               
366-626
               

               
Cow position:
               
chr5:36650448-36650708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
371-630
               

               
Cow position:
               
chr5:30232803-30233067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 118
               

               
Conread position:
               
372-620
               

               
Cow position:
               
chr5:62378696-62378931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
385-624
               

               
Cow position:
               
chr5:66551981-66551741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
91, 107
               

               
Conread position:
               
386-608
               

               
Cow position:
               
chr5:43402819-43403042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
97, 205
               

               
Conread position:
               
386-610
               

               
Cow position:
               
chr5:55019214-55019432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
386-611
               

               
Cow position:
               
chr5:17555112-17554891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
386-622
               

               
Cow position:
               
chr5:47323384-47323615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
146, 75
               

               
Conread position:
               
389-608
               

               
Cow position:
               
chr5:19752227-19752441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
389-609
               

               
Cow position:
               
chr5:29912341-29912560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
142, 33
               

               
Conread position:
               
396-610
               

               
Cow position:
               
chr5:63234897-63234689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
404-596
               

               
Cow position:
               
chr5:26150484-26150294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
405-604
               

               
Cow position:
               
chr5:1461025-1461224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
405-626
               

               
Cow position:
               
chr5:59627036-59626815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 63
               

               
Conread position:
               
406-622
               

               
Cow position:
               
chr5:45420195-45419984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
411-614
               

               
Cow position:
               
chr5:70270803-70271013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
411-624
               

               
Cow position:
               
chr5:40241986-40242199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
414-570
               

               
Cow position:
               
chr5:43408412-43408257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
415-613
               

               
Cow position:
               
chr5:63150219-63150024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
417-600
               

               
Cow position:
               
chr5:24136663-24136845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
418-626
               

               
Cow position:
               
chr5:67118369-67118577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
421-570
               

               
Cow position:
               
chr5:63192788-63192640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
421-610
               

               
Cow position:
               
chr5:56339066-56338880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
422-608
               

               
Cow position:
               
chr5:56517057-56517243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
423-614
               

               
Cow position:
               
chr5:72006537-72006344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
424-624
               

               
Cow position:
               
chr5:69099675-69099876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
426-626
               

               
Cow position:
               
chr5:17602242-17602048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
105, 31
               

               
Conread position:
               
426-631
               

               
Cow position:
               
chr5:49342090-49341887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
427-574
               

               
Cow position:
               
chr5:31052345-31052485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 34
               

               
Conread position:
               
427-631
               

               
Cow position:
               
chr5:35982781-35982572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
428-630
               

               
Cow position:
               
chr5:20288303-20288101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
428-631
               

               
Cow position:
               
chr5:61102675-61102878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
442-631
               

               
Cow position:
               
chr5:49501850-49501662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
454-619
               

               
Cow position:
               
chr5:17104839-17105000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
456-612
               

               
Cow position:
               
chr5:60523721-60523875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
471-630
               

               
Cow position:
               
chr5:24069393-24069550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
491-608
               

               
Cow position:
               
chr5:26147612-26147730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
493-605
               

               
Cow position:
               
chr5:21223346-21223459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
493-618
               

               
Cow position:
               
chr5:50824615-50824740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
493-624
               

               
Cow position:
               
chr5:38168917-38169050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
493-625
               

               
Cow position:
               
chr5:9233966-9233832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
494-610
               

               
Cow position:
               
chr5:35190134-35190251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
494-631
               

               
Cow position:
               
chr5:46704275-46704136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
496-614
               

               
Cow position:
               
chr5:34288224-34288107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
504-622
               

               
Cow position:
               
chr5:38647674-38647793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
508-620
               

               
Cow position:
               
chr5:35394395-35394282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
515-610
               

               
Cow position:
               
chr5:1090774-1090681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               
Show alignments to all cow chromosomes.