Cow genome map
| Conread name: | Ova1-OVRM10115D07 |
| Conread position: | 3-159 |
| Cow position: | chr1:87197840-87197995 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-162 |
| Cow position: | chr1:53458718-53458876 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 3-175 |
| Cow position: | chr1:55685958-55685784 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 29, 125 |
| Conread position: | 3-177 |
| Cow position: | chr1:20104286-20104462 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 3-177 |
| Cow position: | chr1:41027095-41027268 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 152, 96 |
| Conread position: | 3-177 |
| Cow position: | chr1:57575744-57575568 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 116 |
| Conread position: | 3-186 |
| Cow position: | chr1:99605167-99604985 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 103 |
| Conread position: | 3-189 |
| Cow position: | chr1:45315616-45315424 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 3-192 |
| Cow position: | chr1:81569008-81568819 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 3-195 |
| Cow position: | chr1:42774930-42775122 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 3-195 |
| Cow position: | chr1:68688603-68688796 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 3-195 |
| Cow position: | chr1:77232558-77232358 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 162 |
| Conread position: | 3-195 |
| Cow position: | chr1:78857309-78857113 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 3-195 |
| Cow position: | chr1:90904736-90904539 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 3-195 |
| Cow position: | chr1:93590566-93590377 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-196 |
| Cow position: | chr1:41056698-41056897 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 3-196 |
| Cow position: | chr1:42175747-42175946 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 3-196 |
| Cow position: | chr1:67654300-67654109 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 3-208 |
| Cow position: | chr1:100852729-100852930 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 4-189 |
| Cow position: | chr1:91023446-91023261 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 125 |
| Conread position: | 4-191 |
| Cow position: | chr1:56225490-56225675 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 96 |
| Conread position: | 4-195 |
| Cow position: | chr1:83025143-83024950 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 21, 93 |
| Conread position: | 4-195 |
| Cow position: | chr1:88913341-88913535 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 4-196 |
| Cow position: | chr1:11708997-11708809 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 121 |
| Conread position: | 5-171 |
| Cow position: | chr1:89388366-89388533 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 5-175 |
| Cow position: | chr1:91743437-91743269 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 18 |
| Conread position: | 5-177 |
| Cow position: | chr1:62469083-62469254 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 159, 94 |
| Conread position: | 5-177 |
| Cow position: | chr1:71636301-71636132 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 5-185 |
| Cow position: | chr1:1981091-1980906 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 127 |
| Conread position: | 5-187 |
| Cow position: | chr1:102523619-102523434 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 125 |
| Conread position: | 5-196 |
| Cow position: | chr1:24133038-24132848 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 114, 18 |
| Conread position: | 5-197 |
| Cow position: | chr1:10716519-10716723 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 5-215 |
| Cow position: | chr1:52912875-52912657 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 6-199 |
| Cow position: | chr1:72356379-72356586 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 7-197 |
| Cow position: | chr1:81290531-81290723 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 8-168 |
| Cow position: | chr1:43389023-43388867 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 154, 15 |
| Conread position: | 8-189 |
| Cow position: | chr1:75744887-75745070 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 17, 121 |
| Conread position: | 11-195 |
| Cow position: | chr1:102730734-102730546 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 173 |
| Conread position: | 12-190 |
| Cow position: | chr1:30028200-30028020 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 107, 11 |
| Conread position: | 12-195 |
| Cow position: | chr1:77810731-77810548 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 13-183 |
| Cow position: | chr1:81481352-81481182 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 87 |
| Conread position: | 17-195 |
| Cow position: | chr1:92197488-92197667 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 162 |
| Conread position: | 31-195 |
| Cow position: | chr1:81615703-81615864 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 88, 68 |
| Conread position: | 39-197 |
| Cow position: | chr1:39095545-39095702 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 64 |
Show alignments to all cow chromosomes.