Cow genome map
| Conread name: | Ova1-OVRM10115D07 |
| Conread position: | 2-177 |
| Cow position: | chr10:58651197-58651027 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 117, 21 |
| Conread position: | 2-198 |
| Cow position: | chr10:60491275-60491075 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 3-115 |
| Cow position: | chr10:53405463-53405576 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 3-117 |
| Cow position: | chr10:41760330-41760216 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-169 |
| Cow position: | chr10:14188620-14188454 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 3-172 |
| Cow position: | chr10:33665833-33666003 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 3-176 |
| Cow position: | chr10:37508157-37507987 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 3-177 |
| Cow position: | chr10:24756402-24756574 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 3-177 |
| Cow position: | chr10:35731534-35731362 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 157, 20 |
| Conread position: | 3-177 |
| Cow position: | chr10:37068422-37068255 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 3-177 |
| Cow position: | chr10:49923383-49923200 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-194 |
| Cow position: | chr10:10829033-10829224 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 31 |
| Conread position: | 3-195 |
| Cow position: | chr10:39228138-39228348 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 3-195 |
| Cow position: | chr10:59417245-59417055 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 119 |
| Conread position: | 3-196 |
| Cow position: | chr10:23506497-23506304 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 3-196 |
| Cow position: | chr10:37426143-37425951 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 3-197 |
| Cow position: | chr10:34661333-34661144 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 3-199 |
| Cow position: | chr10:6852256-6852453 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 3-199 |
| Cow position: | chr10:30369832-30369637 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-201 |
| Cow position: | chr10:27178486-27178677 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 180, 20 |
| Conread position: | 3-217 |
| Cow position: | chr10:10148639-10148857 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 4-175 |
| Cow position: | chr10:53674817-53674991 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 4-194 |
| Cow position: | chr10:31027652-31027455 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 126 |
| Conread position: | 5-195 |
| Cow position: | chr10:27136696-27136502 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 177 |
| Conread position: | 5-198 |
| Cow position: | chr10:38205718-38205530 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 8-177 |
| Cow position: | chr10:61922145-61921977 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 111, 15 |
| Conread position: | 8-195 |
| Cow position: | chr10:1978676-1978484 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 88 |
| Conread position: | 10-190 |
| Cow position: | chr10:31400901-31400717 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 15, 121 |
| Conread position: | 11-169 |
| Cow position: | chr10:65904242-65904399 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 11-195 |
| Cow position: | chr10:6489870-6490064 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 11-196 |
| Cow position: | chr10:20553182-20553364 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 113 |
| Conread position: | 12-179 |
| Cow position: | chr10:22390596-22390764 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 12-189 |
| Cow position: | chr10:57095201-57095028 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 12-195 |
| Cow position: | chr10:5151346-5151537 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 12-195 |
| Cow position: | chr10:15817791-15817613 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 166, 11 |
| Conread position: | 13-195 |
| Cow position: | chr10:37818556-37818372 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 77 |
| Conread position: | 14-198 |
| Cow position: | chr10:16641930-16641739 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 11, 85 |
| Conread position: | 16-185 |
| Cow position: | chr10:4329994-4329819 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 9, 104 |
| Conread position: | 18-177 |
| Cow position: | chr10:38329649-38329811 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 114 |
| Conread position: | 24-198 |
| Cow position: | chr10:54848790-54848965 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 131, 93 |
| Conread position: | 33-191 |
| Cow position: | chr10:25475554-25475711 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 61 |
Show alignments to all cow chromosomes.