Cow genome map
| Conread name: | Ova1-OVRM10115D07 |
| Conread position: | 2-165 |
| Cow position: | chr11:45646597-45646434 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 34 |
| Conread position: | 3-135 |
| Cow position: | chr11:30355055-30355185 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 96 |
| Conread position: | 3-159 |
| Cow position: | chr11:39499353-39499508 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 94 |
| Conread position: | 3-177 |
| Cow position: | chr11:2484798-2484622 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 116, 96 |
| Conread position: | 3-177 |
| Cow position: | chr11:17036531-17036358 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 3-177 |
| Cow position: | chr11:72292549-72292735 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 3-186 |
| Cow position: | chr11:6256006-6255827 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 3-187 |
| Cow position: | chr11:42206418-42206601 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 96 |
| Conread position: | 3-192 |
| Cow position: | chr11:44032008-44032194 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 3-195 |
| Cow position: | chr11:30830617-30830430 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 119 |
| Conread position: | 3-197 |
| Cow position: | chr11:15017053-15017254 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 129 |
| Conread position: | 3-198 |
| Cow position: | chr11:33409265-33409070 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 3-200 |
| Cow position: | chr11:22884410-22884602 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 151, 81 |
| Conread position: | 3-201 |
| Cow position: | chr11:21885830-21886027 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 4-175 |
| Cow position: | chr11:42160056-42159890 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 154, 17 |
| Conread position: | 4-177 |
| Cow position: | chr11:50152816-50152639 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 28, 126 |
| Conread position: | 4-185 |
| Cow position: | chr11:40608596-40608412 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 122, 179 |
| Conread position: | 4-195 |
| Cow position: | chr11:8437696-8437494 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-196 |
| Cow position: | chr11:67615248-67615058 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 173, 98 |
| Conread position: | 4-196 |
| Cow position: | chr11:69977968-69978156 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 96 |
| Conread position: | 5-174 |
| Cow position: | chr11:77319413-77319583 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 27, 95 |
| Conread position: | 7-190 |
| Cow position: | chr11:35580261-35580450 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 8-177 |
| Cow position: | chr11:11125665-11125839 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 8-195 |
| Cow position: | chr11:46922884-46922696 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 11-197 |
| Cow position: | chr11:80923316-80923129 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 128, 10 |
| Conread position: | 13-198 |
| Cow position: | chr11:63866653-63866465 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 84 |
| Conread position: | 15-185 |
| Cow position: | chr11:80296844-80296677 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 86 |
| Conread position: | 20-252 |
| Cow position: | chr11:63483957-63484187 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 79 |
| Conread position: | 23-198 |
| Cow position: | chr11:56114958-56115134 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 132, 76 |
| Conread position: | 24-195 |
| Cow position: | chr11:23278946-23278770 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 24-196 |
| Cow position: | chr11:3175692-3175861 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 95, 75 |
Show alignments to all cow chromosomes.