Cow genome map
| Conread name: | Ova1-OVRM10115D07 |
| Conread position: | 2-149 |
| Cow position: | chr17:18109030-18108886 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 3-116 |
| Cow position: | chr17:18848103-18847989 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 3-117 |
| Cow position: | chr17:24554051-24554167 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 3-174 |
| Cow position: | chr17:24767233-24767060 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 3-175 |
| Cow position: | chr17:5344672-5344848 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-177 |
| Cow position: | chr17:11912448-11912274 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 23, 103 |
| Conread position: | 3-177 |
| Cow position: | chr17:22051535-22051360 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-177 |
| Cow position: | chr17:25901255-25901439 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 3-177 |
| Cow position: | chr17:39606485-39606653 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 3-189 |
| Cow position: | chr17:21676945-21677136 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 3-189 |
| Cow position: | chr17:25473225-25473039 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-189 |
| Cow position: | chr17:26575174-26574979 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 132 |
| Conread position: | 3-189 |
| Cow position: | chr17:32333036-32332850 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 3-190 |
| Cow position: | chr17:35043869-35043690 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 96 |
| Conread position: | 3-194 |
| Cow position: | chr17:33288602-33288412 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 3-195 |
| Cow position: | chr17:4105939-4105744 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 158 |
| Conread position: | 3-195 |
| Cow position: | chr17:4121675-4121479 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 29, 153 |
| Conread position: | 3-195 |
| Cow position: | chr17:15102839-15102639 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 22, 125 |
| Conread position: | 3-195 |
| Cow position: | chr17:21039612-21039805 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-195 |
| Cow position: | chr17:24824297-24824498 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 3-195 |
| Cow position: | chr17:29995381-29995187 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 3-196 |
| Cow position: | chr17:1634437-1634244 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 4-159 |
| Cow position: | chr17:18473220-18473373 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 78 |
| Conread position: | 4-187 |
| Cow position: | chr17:20072043-20071860 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 4-190 |
| Cow position: | chr17:30728560-30728750 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 4-195 |
| Cow position: | chr17:21003770-21003582 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 152, 19 |
| Conread position: | 4-195 |
| Cow position: | chr17:29084230-29084418 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 5-189 |
| Cow position: | chr17:24895130-24895319 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 120 |
| Conread position: | 5-195 |
| Cow position: | chr17:25612147-25612337 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 95 |
| Conread position: | 5-195 |
| Cow position: | chr17:33793223-33793403 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 173, 18 |
| Conread position: | 5-200 |
| Cow position: | chr17:18934317-18934510 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 125, 94 |
| Conread position: | 6-195 |
| Cow position: | chr17:20881751-20881568 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 6-195 |
| Cow position: | chr17:43315230-43315042 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 8-183 |
| Cow position: | chr17:32989536-32989709 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 25, 92 |
| Conread position: | 8-183 |
| Cow position: | chr17:32993564-32993391 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 110 |
| Conread position: | 8-207 |
| Cow position: | chr17:7810695-7810480 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 23-195 |
| Cow position: | chr17:17782131-17782303 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 30-195 |
| Cow position: | chr17:27606600-27606763 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 132, 65 |
| Conread position: | 212-633 |
| Cow position: | chr17:17223791-17223368 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 103 |
Show alignments to all cow chromosomes.