Cow genome map
| Conread name: | Ova1-OVRM10115D07 |
| Conread position: | 3-177 |
| Cow position: | chr18:9365900-9366079 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 9, 128 |
| Conread position: | 3-177 |
| Cow position: | chr18:41724837-41724657 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 3-177 |
| Cow position: | chr18:42432105-42431935 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 3-177 |
| Cow position: | chr18:43796974-43796802 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 3-177 |
| Cow position: | chr18:49603062-49602885 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 3-187 |
| Cow position: | chr18:11672024-11672220 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 3-188 |
| Cow position: | chr18:17391012-17390823 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 3-188 |
| Cow position: | chr18:48407720-48407903 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 3-189 |
| Cow position: | chr18:1954608-1954412 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 22, 187 |
| Conread position: | 3-195 |
| Cow position: | chr18:11691427-11691230 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 3-196 |
| Cow position: | chr18:33896436-33896238 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 5 |
| Conread position: | 3-197 |
| Cow position: | chr18:2773411-2773211 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 183 |
| Conread position: | 3-197 |
| Cow position: | chr18:2776914-2776714 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 183 |
| Conread position: | 3-198 |
| Cow position: | chr18:44917738-44917936 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 116 |
| Conread position: | 3-206 |
| Cow position: | chr18:49841263-49841471 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 4-191 |
| Cow position: | chr18:35535164-35534980 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 21, 93 |
| Conread position: | 4-192 |
| Cow position: | chr18:50004720-50004532 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 153, 19 |
| Conread position: | 4-208 |
| Cow position: | chr18:30360167-30359957 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 181 |
| Conread position: | 5-195 |
| Cow position: | chr18:23630621-23630438 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 148, 18 |
| Conread position: | 5-195 |
| Cow position: | chr18:41702820-41703011 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 18 |
| Conread position: | 5-197 |
| Cow position: | chr18:4489925-4489720 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 5-201 |
| Cow position: | chr18:10977227-10977035 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 127, 94 |
| Conread position: | 6-197 |
| Cow position: | chr18:50632458-50632266 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 8-197 |
| Cow position: | chr18:45558133-45558320 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 11-177 |
| Cow position: | chr18:33158931-33159100 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 121 |
| Conread position: | 11-194 |
| Cow position: | chr18:34444744-34444560 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 144, 12 |
| Conread position: | 18-177 |
| Cow position: | chr18:49440837-49441000 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 7, 112 |
| Conread position: | 24-186 |
| Cow position: | chr18:47096432-47096589 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.