Cow genome map
| Conread name: | Ova1-OVRM10115D07 |
| Conread position: | 3-132 |
| Cow position: | chr4:44903301-44903430 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 3-147 |
| Cow position: | chr4:23600174-23600318 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-157 |
| Cow position: | chr4:43916295-43916449 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 125 |
| Conread position: | 3-169 |
| Cow position: | chr4:46435331-46435508 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 3-174 |
| Cow position: | chr4:19333393-19333562 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 3-177 |
| Cow position: | chr4:38209968-38209793 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 3-177 |
| Cow position: | chr4:52832009-52831833 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 3-177 |
| Cow position: | chr4:59277472-59277292 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 129 |
| Conread position: | 3-188 |
| Cow position: | chr4:51083331-51083148 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 3-191 |
| Cow position: | chr4:47048124-47048309 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 3-193 |
| Cow position: | chr4:20027096-20026908 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 3-195 |
| Cow position: | chr4:19119024-19119220 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 134 |
| Conread position: | 3-195 |
| Cow position: | chr4:37991599-37991788 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 151, 20 |
| Conread position: | 3-195 |
| Cow position: | chr4:39007514-39007696 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 3-195 |
| Cow position: | chr4:42374149-42373956 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 3-195 |
| Cow position: | chr4:44854284-44854086 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 93 |
| Conread position: | 3-195 |
| Cow position: | chr4:62472086-62472275 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-196 |
| Cow position: | chr4:18951980-18952179 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 128 |
| Conread position: | 3-199 |
| Cow position: | chr4:3340959-3341159 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 29, 93 |
| Conread position: | 3-200 |
| Cow position: | chr4:17851246-17851054 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-201 |
| Cow position: | chr4:48486001-48486202 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 3-209 |
| Cow position: | chr4:17186343-17186136 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 3-220 |
| Cow position: | chr4:561639-561859 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 129, 87 |
| Conread position: | 4-177 |
| Cow position: | chr4:3519429-3519601 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 4-177 |
| Cow position: | chr4:38935367-38935540 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 21, 68 |
| Conread position: | 5-177 |
| Cow position: | chr4:13344547-13344718 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 5-180 |
| Cow position: | chr4:60506285-60506461 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 5-195 |
| Cow position: | chr4:60527189-60527380 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 124 |
| Conread position: | 5-197 |
| Cow position: | chr4:19431687-19431487 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 7-177 |
| Cow position: | chr4:22331135-22331302 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 8-186 |
| Cow position: | chr4:19578397-19578576 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 94 |
| Conread position: | 8-197 |
| Cow position: | chr4:479780-479596 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 92 |
| Conread position: | 9-177 |
| Cow position: | chr4:62794351-62794174 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 90 |
| Conread position: | 10-204 |
| Cow position: | chr4:68590785-68590975 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 11-131 |
| Cow position: | chr4:7808586-7808706 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 107 |
| Conread position: | 11-185 |
| Cow position: | chr4:37915321-37915149 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 89 |
| Conread position: | 11-190 |
| Cow position: | chr4:59002124-59001942 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 108, 117 |
| Conread position: | 11-198 |
| Cow position: | chr4:22215496-22215310 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 12-199 |
| Cow position: | chr4:65463490-65463307 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 146, 11 |
| Conread position: | 24-195 |
| Cow position: | chr4:28660522-28660346 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 103 |
Show alignments to all cow chromosomes.