Cow genome map
| Conread name: | Ova1-OVRM10115D07 |
| Conread position: | 3-164 |
| Cow position: | chr5:38168934-38169094 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 3-177 |
| Cow position: | chr5:17086980-17086800 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 3-177 |
| Cow position: | chr5:59626931-59626755 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 3-177 |
| Cow position: | chr5:69383295-69383468 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 87 |
| Conread position: | 3-186 |
| Cow position: | chr5:20288223-20288032 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 3-186 |
| Cow position: | chr5:69099760-69099945 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 3-192 |
| Cow position: | chr5:34288210-34288023 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 3-192 |
| Cow position: | chr5:57074291-57074106 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 102 |
| Conread position: | 3-194 |
| Cow position: | chr5:40109533-40109717 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 3-194 |
| Cow position: | chr5:42050592-42050781 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 3-194 |
| Cow position: | chr5:44028263-44028073 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 3-195 |
| Cow position: | chr5:21828908-21829099 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 3-195 |
| Cow position: | chr5:26147631-26147826 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 3-195 |
| Cow position: | chr5:30276730-30276922 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 3-199 |
| Cow position: | chr5:56070899-56071096 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 3-202 |
| Cow position: | chr5:25495318-25495109 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 4-177 |
| Cow position: | chr5:35684979-35685150 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 128, 19 |
| Conread position: | 4-188 |
| Cow position: | chr5:51298671-51298485 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 154, 113 |
| Conread position: | 5-174 |
| Cow position: | chr5:66551855-66551678 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 5-196 |
| Cow position: | chr5:55942337-55942141 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 126 |
| Conread position: | 5-198 |
| Cow position: | chr5:35190152-35190346 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 8-192 |
| Cow position: | chr5:2240946-2240758 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 11-195 |
| Cow position: | chr5:26549092-26548907 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 79 |
| Conread position: | 16-189 |
| Cow position: | chr5:49207274-49207101 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 16-196 |
| Cow position: | chr5:29599493-29599314 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 24-190 |
| Cow position: | chr5:34787636-34787804 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 71 |
| Conread position: | 24-194 |
| Cow position: | chr5:21721408-21721240 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 95, 75 |
| Conread position: | 27-194 |
| Cow position: | chr5:32975823-32976000 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 48-195 |
| Cow position: | chr5:74049910-74050059 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 80 |
Show alignments to all cow chromosomes.