Cow genome map
| Conread name: | Ova1-OVRM10115D07 |
| Conread position: | 3-117 |
| Cow position: | chr9:8562835-8562722 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 3-167 |
| Cow position: | chr9:33119873-33120039 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 29, 116 |
| Conread position: | 3-175 |
| Cow position: | chr9:33823133-33822958 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 3-177 |
| Cow position: | chr9:4341144-4341317 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-177 |
| Cow position: | chr9:9595935-9596111 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 99 |
| Conread position: | 3-177 |
| Cow position: | chr9:24887221-24887044 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 3-185 |
| Cow position: | chr9:34374909-34375098 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 3-188 |
| Cow position: | chr9:45285520-45285711 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 20, 129 |
| Conread position: | 3-193 |
| Cow position: | chr9:17840663-17840855 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 3-195 |
| Cow position: | chr9:34286814-34286620 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 3-195 |
| Cow position: | chr9:39011454-39011646 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-195 |
| Cow position: | chr9:51620457-51620266 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 3-196 |
| Cow position: | chr9:33584670-33584863 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 3-200 |
| Cow position: | chr9:36628133-36627938 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 3-223 |
| Cow position: | chr9:19718325-19718544 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 29, 101 |
| Conread position: | 4-133 |
| Cow position: | chr9:4267968-4268098 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 125 |
| Conread position: | 4-180 |
| Cow position: | chr9:64310765-64310944 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 122, 19 |
| Conread position: | 4-186 |
| Cow position: | chr9:40984519-40984331 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 115 |
| Conread position: | 4-192 |
| Cow position: | chr9:40603682-40603492 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 125 |
| Conread position: | 4-195 |
| Cow position: | chr9:28747506-28747697 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 4-196 |
| Cow position: | chr9:13169649-13169846 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 4-201 |
| Cow position: | chr9:57131509-57131314 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 5-177 |
| Cow position: | chr9:43159765-43159594 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 5-197 |
| Cow position: | chr9:26279158-26279352 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 5-221 |
| Cow position: | chr9:48628041-48627820 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 11-199 |
| Cow position: | chr9:53109257-53109065 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 83, 107 |
| Conread position: | 12-177 |
| Cow position: | chr9:30123932-30123769 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 148, 11 |
| Conread position: | 13-200 |
| Cow position: | chr9:43757541-43757359 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 76 |
| Conread position: | 16-201 |
| Cow position: | chr9:26394347-26394531 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 102 |
Show alignments to all cow chromosomes.