Cow genome map
| Conread name: | Ova1-OVRM10115D07 |
| Conread position: | 2-177 |
| Cow position: | chrX:1466202-1466382 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 3-115 |
| Cow position: | chrX:27306495-27306608 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 3-177 |
| Cow position: | chrX:8869361-8869185 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 3-177 |
| Cow position: | chrX:31436515-31436688 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 3-187 |
| Cow position: | chrX:41858841-41858656 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 3-189 |
| Cow position: | chrX:37072430-37072620 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 29, 101 |
| Conread position: | 3-190 |
| Cow position: | chrX:20957279-20957470 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 3-194 |
| Cow position: | chrX:34376983-34377174 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 3-195 |
| Cow position: | chrX:16984682-16984871 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 3-197 |
| Cow position: | chrX:13177435-13177244 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-197 |
| Cow position: | chrX:42927783-42927592 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 3-198 |
| Cow position: | chrX:32866916-32867111 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 3-198 |
| Cow position: | chrX:34991405-34991601 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 4-175 |
| Cow position: | chrX:24749130-24749304 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 23 |
| Conread position: | 4-185 |
| Cow position: | chrX:23471824-23471639 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 4-188 |
| Cow position: | chrX:34532562-34532742 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 4-195 |
| Cow position: | chrX:34411888-34412086 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 131 |
| Conread position: | 4-196 |
| Cow position: | chrX:27431876-27431686 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 4-197 |
| Cow position: | chrX:34837022-34836834 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 4-198 |
| Cow position: | chrX:19394595-19394798 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 128 |
| Conread position: | 5-196 |
| Cow position: | chrX:20583709-20583900 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 5-197 |
| Cow position: | chrX:11656124-11656317 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 11-195 |
| Cow position: | chrX:27145653-27145840 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 11-196 |
| Cow position: | chrX:29050299-29050479 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 140, 11 |
| Conread position: | 12-195 |
| Cow position: | chrX:39290409-39290594 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 78 |
| Conread position: | 15-195 |
| Cow position: | chrX:12979781-12979599 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 124 |
| Conread position: | 18-190 |
| Cow position: | chrX:42086884-42087059 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 108, 100 |
| Conread position: | 23-196 |
| Cow position: | chrX:41215384-41215560 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 107 |
| Conread position: | 23-197 |
| Cow position: | chrX:40556397-40556225 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 96 |
| Conread position: | 24-188 |
| Cow position: | chrX:6480533-6480362 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 101 |
| Conread position: | 27-191 |
| Cow position: | chrX:38094454-38094294 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 132, 72 |
| Conread position: | 35-177 |
| Cow position: | chrX:231944-231807 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 84, 64 |
Show alignments to all cow chromosomes.