Cow genome map
| Conread name: | Ova1-OVRM10122D05 |
| Conread position: | 1-387 |
| Cow position: | chr1:21995353-21994947 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 36, 190 |
| Conread position: | 1-402 |
| Cow position: | chr1:76861404-76860977 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 30 |
| Conread position: | 1-419 |
| Cow position: | chr1:85143773-85143347 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 1-438 |
| Cow position: | chr1:13580095-13579634 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 327 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 33, 258 |
| Conread position: | 1-438 |
| Cow position: | chr1:81357985-81357531 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 317 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 33, 234 |
| Conread position: | 1-454 |
| Cow position: | chr1:31400747-31400272 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 331 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 36, 257 |
| Conread position: | 1-463 |
| Cow position: | chr1:39250804-39250315 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 259 |
| Conread position: | 1-466 |
| Cow position: | chr1:23970151-23969664 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 256 |
| Conread position: | 1-472 |
| Cow position: | chr1:31317831-31317340 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 96 |
| Conread position: | 1-498 |
| Cow position: | chr1:68093309-68093831 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 340 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 33, 250 |
| Conread position: | 1-499 |
| Cow position: | chr1:44949931-44950443 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 345 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 132, 39 |
| Conread position: | 1-502 |
| Cow position: | chr1:38409879-38410389 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 326 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 31, 109 |
| Conread position: | 1-519 |
| Cow position: | chr1:79454310-79453767 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 256 |
| Conread position: | 1-544 |
| Cow position: | chr1:101011258-101010691 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 384 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 1-546 |
| Cow position: | chr1:57570494-57571057 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 242 |
| Conread position: | 1-546 |
| Cow position: | chr1:61748774-61748224 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 1-547 |
| Cow position: | chr1:42739071-42739634 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 253 |
| Conread position: | 1-548 |
| Cow position: | chr1:3383658-3383089 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 255 |
| Conread position: | 1-548 |
| Cow position: | chr1:5504597-5505166 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 211 |
| Conread position: | 1-548 |
| Cow position: | chr1:12058862-12058292 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 228 |
| Conread position: | 1-548 |
| Cow position: | chr1:21544447-21545003 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 246 |
| Conread position: | 1-548 |
| Cow position: | chr1:22726954-22727520 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 379 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 31, 108 |
| Conread position: | 1-548 |
| Cow position: | chr1:23039754-23040322 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 25 |
| Conread position: | 1-548 |
| Cow position: | chr1:23579137-23578576 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 108 |
| Conread position: | 1-548 |
| Cow position: | chr1:24441391-24440831 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 248 |
| Conread position: | 1-548 |
| Cow position: | chr1:26812414-26811844 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 254 |
| Conread position: | 1-548 |
| Cow position: | chr1:28875748-28876325 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr1:30532363-30531792 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 202 |
| Conread position: | 1-548 |
| Cow position: | chr1:33548743-33548173 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 255 |
| Conread position: | 1-548 |
| Cow position: | chr1:44963818-44963252 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 237 |
| Conread position: | 1-548 |
| Cow position: | chr1:55779528-55780099 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr1:56141697-56141125 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 258 |
| Conread position: | 1-548 |
| Cow position: | chr1:57694982-57694421 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 133 |
| Conread position: | 1-548 |
| Cow position: | chr1:58339587-58340150 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 1-548 |
| Cow position: | chr1:61343056-61342478 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 259 |
| Conread position: | 1-548 |
| Cow position: | chr1:61562693-61563265 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr1:63603128-63602561 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr1:68949876-68950439 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 374 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 1-548 |
| Cow position: | chr1:69405814-69406386 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr1:72086253-72086827 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 1-548 |
| Cow position: | chr1:72184206-72183650 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 237 |
| Conread position: | 1-548 |
| Cow position: | chr1:73064678-73064107 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 216 |
| Conread position: | 1-548 |
| Cow position: | chr1:79633896-79633324 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 191 |
| Conread position: | 1-548 |
| Cow position: | chr1:79913607-79914145 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 75 |
| Conread position: | 1-548 |
| Cow position: | chr1:82369086-82369648 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 254 |
| Conread position: | 1-548 |
| Cow position: | chr1:89186782-89186230 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 255 |
| Conread position: | 1-548 |
| Cow position: | chr1:90912485-90913057 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 197 |
| Conread position: | 1-548 |
| Cow position: | chr1:91890736-91890163 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 253 |
| Conread position: | 1-548 |
| Cow position: | chr1:94662335-94662881 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 96 |
| Conread position: | 1-548 |
| Cow position: | chr1:99916093-99916667 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr1:101833061-101833625 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 377 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 32, 99 |
| Conread position: | 2-527 |
| Cow position: | chr1:82863474-82864022 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 258 |
| Conread position: | 2-546 |
| Cow position: | chr1:51966929-51967480 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 364 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 132, 17 |
| Conread position: | 2-548 |
| Cow position: | chr1:92280127-92279565 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 249 |
| Conread position: | 3-411 |
| Cow position: | chr1:92554099-92553669 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 30, 233 |
| Conread position: | 3-548 |
| Cow position: | chr1:58088886-58088327 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 241 |
| Conread position: | 3-548 |
| Cow position: | chr1:100708730-100709299 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 253 |
| Conread position: | 4-358 |
| Cow position: | chr1:28568050-28567692 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 10, 122 |
| Conread position: | 4-495 |
| Cow position: | chr1:29949148-29948649 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 44 |
| Conread position: | 5-397 |
| Cow position: | chr1:32912335-32912724 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 5-537 |
| Cow position: | chr1:72996650-72997190 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 44 |
| Conread position: | 10-496 |
| Cow position: | chr1:73434660-73434149 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-547 |
| Cow position: | chr1:59484198-59483636 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr1:4209248-4208685 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr1:8556352-8556914 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 247 |
| Conread position: | 10-548 |
| Cow position: | chr1:29365073-29365634 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr1:33853947-33854495 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr1:35599139-35598582 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 248 |
| Conread position: | 10-548 |
| Cow position: | chr1:46613623-46613068 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 245 |
| Conread position: | 10-548 |
| Cow position: | chr1:49267548-49268111 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr1:56725838-56726393 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 244 |
| Conread position: | 10-548 |
| Cow position: | chr1:57525950-57526504 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 203 |
| Conread position: | 10-548 |
| Cow position: | chr1:60341716-60342284 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr1:61203047-61203612 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 223 |
| Conread position: | 10-548 |
| Cow position: | chr1:62927134-62927697 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr1:70069330-70069906 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr1:71560077-71559516 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 246 |
| Conread position: | 10-548 |
| Cow position: | chr1:76872550-76873110 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 245 |
| Conread position: | 10-548 |
| Cow position: | chr1:77747411-77747971 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr1:82478650-82479212 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 250 |
| Conread position: | 10-548 |
| Cow position: | chr1:86545471-86544909 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr1:86593638-86593076 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 247 |
| Conread position: | 10-548 |
| Cow position: | chr1:87723022-87722459 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr1:89431071-89431631 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 10-548 |
| Cow position: | chr1:89767928-89767377 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 59 |
| Conread position: | 10-548 |
| Cow position: | chr1:91901688-91902247 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 244 |
| Conread position: | 10-550 |
| Cow position: | chr1:68847037-68846478 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 372 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 249 |
| Conread position: | 19-548 |
| Cow position: | chr1:82910156-82909603 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 240 |
| Conread position: | 22-548 |
| Cow position: | chr1:38477987-38478533 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 229 |
| Conread position: | 24-242 |
| Cow position: | chr1:59249627-59249403 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 40, 121 |
| Conread position: | 25-547 |
| Cow position: | chr1:40682048-40681504 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 231 |
| Conread position: | 31-548 |
| Cow position: | chr1:63045574-63046113 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 224 |
| Conread position: | 31-548 |
| Cow position: | chr1:81301806-81302344 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 224 |
| Conread position: | 34-450 |
| Cow position: | chr1:77109430-77108997 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 297 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 36, 203 |
| Conread position: | 41-548 |
| Cow position: | chr1:65389257-65389787 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 213 |
| Conread position: | 41-548 |
| Cow position: | chr1:66490281-66490809 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 41-548 |
| Cow position: | chr1:88178556-88179086 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 216 |
| Conread position: | 41-549 |
| Cow position: | chr1:102432041-102431510 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 213 |
| Conread position: | 44-548 |
| Cow position: | chr1:63045444-63044921 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 208 |
| Conread position: | 47-548 |
| Cow position: | chr1:62142207-62141700 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 19 |
| Conread position: | 54-502 |
| Cow position: | chr1:76850067-76849600 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 168 |
| Conread position: | 64-527 |
| Cow position: | chr1:27113423-27112950 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 317 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 96, 184 |
| Conread position: | 64-548 |
| Cow position: | chr1:25552533-25553035 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 141-548 |
| Cow position: | chr1:8827838-8828249 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 141-548 |
| Cow position: | chr1:22529980-22529580 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 281 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 141-548 |
| Cow position: | chr1:52171991-52171580 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 143-548 |
| Cow position: | chr1:31392468-31392065 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 7 |
| Conread position: | 152-547 |
| Cow position: | chr1:10011475-10011091 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 154, 31 |
| Conread position: | 152-548 |
| Cow position: | chr1:6197444-6197048 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 80 |
| Conread position: | 153-415 |
| Cow position: | chr1:48411584-48411843 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 123, 40 |
| Conread position: | 153-500 |
| Cow position: | chr1:21431467-21431123 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-526 |
| Cow position: | chr1:19441693-19441320 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-532 |
| Cow position: | chr1:79335346-79334967 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 153-547 |
| Cow position: | chr1:86327056-86326649 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 127, 82 |
| Conread position: | 153-548 |
| Cow position: | chr1:2369929-2369543 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 143, 55 |
| Conread position: | 153-548 |
| Cow position: | chr1:7199947-7200335 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 153-548 |
| Cow position: | chr1:21134275-21133879 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr1:22481824-22481432 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 17 |
| Conread position: | 153-548 |
| Cow position: | chr1:56645046-56644650 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 148, 81 |
| Conread position: | 153-548 |
| Cow position: | chr1:67832305-67831908 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 153-548 |
| Cow position: | chr1:71677225-71676833 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 83 |
| Conread position: | 154-538 |
| Cow position: | chr1:56631222-56631606 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 152, 80 |
| Conread position: | 154-548 |
| Cow position: | chr1:3339494-3339895 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 275 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 152, 80 |
| Conread position: | 154-548 |
| Cow position: | chr1:88389168-88389556 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 112, 83 |
| Conread position: | 155-438 |
| Cow position: | chr1:23658260-23658541 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 156-548 |
| Cow position: | chr1:61747323-61746940 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 156-548 |
| Cow position: | chr1:88393736-88393357 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 149, 78 |
| Conread position: | 158-412 |
| Cow position: | chr1:29704803-29704556 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 148, 15 |
| Conread position: | 158-520 |
| Cow position: | chr1:17949319-17949681 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 145, 76 |
| Conread position: | 158-548 |
| Cow position: | chr1:28414373-28413988 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 148, 79 |
| Conread position: | 159-548 |
| Cow position: | chr1:13405547-13405157 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 159-548 |
| Cow position: | chr1:20831723-20832110 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 159-548 |
| Cow position: | chr1:34684336-34684714 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 159-548 |
| Cow position: | chr1:91673070-91673460 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 160-540 |
| Cow position: | chr1:85323052-85323450 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 273 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 160-548 |
| Cow position: | chr1:68431078-68431458 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 146, 74 |
| Conread position: | 160-548 |
| Cow position: | chr1:86451189-86451569 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 142, 71 |
| Conread position: | 167-456 |
| Cow position: | chr1:47162616-47162919 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 68, 239 |
| Conread position: | 167-548 |
| Cow position: | chr1:21133017-21132639 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 139, 63 |
| Conread position: | 170-563 |
| Cow position: | chr1:39111536-39111928 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 269 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 136, 64 |
| Conread position: | 174-519 |
| Cow position: | chr1:32071882-32072231 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 132, 61 |
| Conread position: | 178-548 |
| Cow position: | chr1:59203406-59203035 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 57 |
| Conread position: | 180-474 |
| Cow position: | chr1:99016164-99015870 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 126, 57 |
| Conread position: | 180-528 |
| Cow position: | chr1:102322241-102321895 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 126, 55 |
| Conread position: | 186-548 |
| Cow position: | chr1:41462818-41463177 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 188-504 |
| Cow position: | chr1:57397481-57397161 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 118, 17 |
| Conread position: | 192-548 |
| Cow position: | chr1:20867730-20867377 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 143, 8 |
| Conread position: | 244-489 |
| Cow position: | chr1:93426375-93426128 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 57, 185 |
| Conread position: | 248-548 |
| Cow position: | chr1:62731721-62732028 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 249-464 |
| Cow position: | chr1:17175717-17175493 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 63 |
| Conread position: | 249-544 |
| Cow position: | chr1:65811419-65811707 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 66, 49 |
| Conread position: | 249-546 |
| Cow position: | chr1:33715876-33716186 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 57, 272 |
| Conread position: | 255-529 |
| Cow position: | chr1:41516112-41515830 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 273 |
| Conread position: | 255-545 |
| Cow position: | chr1:57907682-57907969 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 255-548 |
| Cow position: | chr1:58169493-58169211 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 135 |
| Conread position: | 256-496 |
| Cow position: | chr1:78941315-78941065 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 208 |
| Conread position: | 256-527 |
| Cow position: | chr1:30037626-30037904 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 66 |
Show alignments to all cow chromosomes.