Cow genome map

Conread name: Ova1-OVRM10122D05

Conread position: 1-233
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 18

Conread position: 1-233
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 140

Conread position: 1-337
Cow position:
Alignm length: 358
Alignm identity: 248
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 63

Conread position: 1-379
Cow position:
Alignm length: 411
Alignm identity: 279
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 242

Conread position: 1-474
Cow position:
Alignm length: 506
Alignm identity: 336
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 70

Conread position: 1-493
Cow position:
Alignm length: 522
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 257

Conread position: 1-495
Cow position:
Alignm length: 523
Alignm identity: 355
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 113

Conread position: 1-513
Cow position:
Alignm length: 535
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 97

Conread position: 1-548
Cow position:
Alignm length: 580
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 257

Conread position: 1-548
Cow position:
Alignm length: 567
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 246

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 256

Conread position: 1-548
Cow position:
Alignm length: 577
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 256

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 258

Conread position: 1-548
Cow position:
Alignm length: 585
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 260

Conread position: 1-548
Cow position:
Alignm length: 582
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 255

Conread position: 1-548
Cow position:
Alignm length: 581
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 29

Conread position: 1-548
Cow position:
Alignm length: 582
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 589
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 79

Conread position: 1-548
Cow position:
Alignm length: 582
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 258

Conread position: 1-548
Cow position:
Alignm length: 581
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 585
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 259

Conread position: 1-548
Cow position:
Alignm length: 588
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 258

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 578
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 35

Conread position: 1-548
Cow position:
Alignm length: 582
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 572
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 153

Conread position: 1-548
Cow position:
Alignm length: 566
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 149

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 254

Conread position: 1-548
Cow position:
Alignm length: 580
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 567
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 334

Conread position: 1-548
Cow position:
Alignm length: 585
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 1-548
Cow position:
Alignm length: 577
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 18

Conread position: 1-548
Cow position:
Alignm length: 564
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 86

Conread position: 2-492
Cow position:
Alignm length: 503
Alignm identity: 326
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 38, 111

Conread position: 2-548
Cow position:
Alignm length: 577
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 255

Conread position: 2-548
Cow position:
Alignm length: 580
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 256

Conread position: 2-575
Cow position:
Alignm length: 604
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 253

Conread position: 4-518
Cow position:
Alignm length: 539
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 190

Conread position: 5-548
Cow position:
Alignm length: 577
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 5-563
Cow position:
Alignm length: 583
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 230

Conread position: 7-528
Cow position:
Alignm length: 540
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 7-548
Cow position:
Alignm length: 573
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 251

Conread position: 9-464
Cow position:
Alignm length: 486
Alignm identity: 319
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 25, 250

Conread position: 10-322
Cow position:
Alignm length: 324
Alignm identity: 216
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 52

Conread position: 10-465
Cow position:
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 92

Conread position: 10-489
Cow position:
Alignm length: 513
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 247

Conread position: 10-547
Cow position:
Alignm length: 570
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 54

Conread position: 10-548
Cow position:
Alignm length: 575
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 228

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 575
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 248

Conread position: 10-548
Cow position:
Alignm length: 573
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 573
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 573
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 564
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 246

Conread position: 10-575
Cow position:
Alignm length: 592
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 239

Conread position: 11-548
Cow position:
Alignm length: 559
Alignm identity: 346
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 89

Conread position: 15-548
Cow position:
Alignm length: 567
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 241

Conread position: 15-548
Cow position:
Alignm length: 567
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 241

Conread position: 15-548
Cow position:
Alignm length: 569
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 9

Conread position: 19-548
Cow position:
Alignm length: 567
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 207

Conread position: 19-548
Cow position:
Alignm length: 563
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 240

Conread position: 23-476
Cow position:
Alignm length: 485
Alignm identity: 318
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 232

Conread position: 23-548
Cow position:
Alignm length: 558
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 234

Conread position: 23-548
Cow position:
Alignm length: 556
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 234

Conread position: 23-548
Cow position:
Alignm length: 558
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 233

Conread position: 26-548
Cow position:
Alignm length: 551
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 234

Conread position: 31-465
Cow position:
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 23

Conread position: 31-548
Cow position:
Alignm length: 552
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 225

Conread position: 31-548
Cow position:
Alignm length: 547
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 220

Conread position: 31-548
Cow position:
Alignm length: 550
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 224

Conread position: 31-548
Cow position:
Alignm length: 551
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 223

Conread position: 32-304
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 43

Conread position: 42-442
Cow position:
Alignm length: 413
Alignm identity: 272
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 17, 152

Conread position: 42-550
Cow position:
Alignm length: 547
Alignm identity: 364
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 26, 215

Conread position: 56-548
Cow position:
Alignm length: 521
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 23

Conread position: 64-548
Cow position:
Alignm length: 498
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 173

Conread position: 85-548
Cow position:
Alignm length: 497
Alignm identity: 336
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 49, 106

Conread position: 88-527
Cow position:
Alignm length: 451
Alignm identity: 302
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 247, 30

Conread position: 101-548
Cow position:
Alignm length: 463
Alignm identity: 309
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 118, 15

Conread position: 121-548
Cow position:
Alignm length: 444
Alignm identity: 306
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 17, 119

Conread position: 141-546
Cow position:
Alignm length: 419
Alignm identity: 282
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 13, 95

Conread position: 142-425
Cow position:
Alignm length: 292
Alignm identity: 200
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 159, 47

Conread position: 142-548
Cow position:
Alignm length: 418
Alignm identity: 265
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 92

Conread position: 145-533
Cow position:
Alignm length: 392
Alignm identity: 252
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 196, 92

Conread position: 152-548
Cow position:
Alignm length: 404
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 78

Conread position: 153-528
Cow position:
Alignm length: 384
Alignm identity: 258
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 175, 82

Conread position: 153-548
Cow position:
Alignm length: 408
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 153-548
Cow position:
Alignm length: 407
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 153-548
Cow position:
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 62

Conread position: 153-548
Cow position:
Alignm length: 412
Alignm identity: 271
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 153, 82

Conread position: 154-527
Cow position:
Alignm length: 383
Alignm identity: 254
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 152, 83

Conread position: 154-548
Cow position:
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 80

Conread position: 154-548
Cow position:
Alignm length: 409
Alignm identity: 282
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 147, 80

Conread position: 154-548
Cow position:
Alignm length: 403
Alignm identity: 272
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 174, 78

Conread position: 154-548
Cow position:
Alignm length: 406
Alignm identity: 270
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 78

Conread position: 154-548
Cow position:
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 77

Conread position: 156-548
Cow position:
Alignm length: 403
Alignm identity: 269
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 150, 78

Conread position: 158-526
Cow position:
Alignm length: 379
Alignm identity: 256
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 148, 76

Conread position: 158-547
Cow position:
Alignm length: 402
Alignm identity: 268
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 148, 76

Conread position: 158-548
Cow position:
Alignm length: 405
Alignm identity: 281
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 148, 21

Conread position: 159-393
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 147, 75

Conread position: 159-545
Cow position:
Alignm length: 397
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 76

Conread position: 159-548
Cow position:
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 75

Conread position: 167-410
Cow position:
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 68

Conread position: 167-548
Cow position:
Alignm length: 396
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 67

Conread position: 168-548
Cow position:
Alignm length: 391
Alignm identity: 255
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 138, 38

Conread position: 179-548
Cow position:
Alignm length: 379
Alignm identity: 259
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 101, 58

Conread position: 180-548
Cow position:
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 54

Conread position: 187-432
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 111, 9

Conread position: 191-548
Cow position:
Alignm length: 368
Alignm identity: 254
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 114, 44

Conread position: 250-548
Cow position:
Alignm length: 310
Alignm identity: 202
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 156

Conread position: 252-494
Cow position:
Alignm length: 249
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 54

Conread position: 255-469
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 209

Conread position: 255-548
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.