Cow genome map
| Conread name: | Ova1-OVRM10122D05 |
| Conread position: | 1-429 |
| Cow position: | chr12:30141030-30141463 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 84 |
| Conread position: | 1-475 |
| Cow position: | chr12:24030126-24029634 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 343 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 39, 259 |
| Conread position: | 1-547 |
| Cow position: | chr12:20846741-20847311 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 257 |
| Conread position: | 1-548 |
| Cow position: | chr12:8628596-8628027 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 387 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 33, 260 |
| Conread position: | 1-548 |
| Cow position: | chr12:12755552-12754982 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr12:18585279-18585847 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 193 |
| Conread position: | 1-548 |
| Cow position: | chr12:22203065-22202494 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr12:25097661-25097091 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 377 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 30, 219 |
| Conread position: | 1-548 |
| Cow position: | chr12:27853344-27852767 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 255 |
| Conread position: | 1-548 |
| Cow position: | chr12:30686344-30686916 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 229 |
| Conread position: | 1-548 |
| Cow position: | chr12:32284503-32285061 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 380 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 39, 254 |
| Conread position: | 1-548 |
| Cow position: | chr12:42231912-42232484 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr12:42856924-42856357 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 253 |
| Conread position: | 1-551 |
| Cow position: | chr12:25144098-25143552 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 381 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 2-439 |
| Cow position: | chr12:6479672-6479275 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 360, 39 |
| Conread position: | 3-548 |
| Cow position: | chr12:27930187-27929617 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 253 |
| Conread position: | 7-548 |
| Cow position: | chr12:23100425-23099875 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 379 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 10-546 |
| Cow position: | chr12:1437540-1438082 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 376 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 24, 228 |
| Conread position: | 10-548 |
| Cow position: | chr12:17717913-17718475 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 243 |
| Conread position: | 10-548 |
| Cow position: | chr12:22747826-22748389 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr12:25266720-25266159 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 10-548 |
| Cow position: | chr12:34175976-34176539 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 249 |
| Conread position: | 10-548 |
| Cow position: | chr12:38892974-38893538 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr12:42605564-42605001 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 17-548 |
| Cow position: | chr12:27993719-27994275 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 239 |
| Conread position: | 25-498 |
| Cow position: | chr12:1469498-1468999 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 233 |
| Conread position: | 31-547 |
| Cow position: | chr12:24980356-24980895 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 225 |
| Conread position: | 50-548 |
| Cow position: | chr12:1512110-1511589 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 206 |
| Conread position: | 54-548 |
| Cow position: | chr12:39929828-39930343 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 200 |
| Conread position: | 64-548 |
| Cow position: | chr12:5712641-5713138 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 343 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 19, 15 |
| Conread position: | 141-548 |
| Cow position: | chr12:20459954-20459545 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 93 |
| Conread position: | 141-548 |
| Cow position: | chr12:27506884-27506475 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 93 |
| Conread position: | 153-397 |
| Cow position: | chr12:26822464-26822707 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 153, 79 |
| Conread position: | 153-498 |
| Cow position: | chr12:21945821-21946168 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 153, 82 |
| Conread position: | 153-500 |
| Cow position: | chr12:22480218-22479869 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 79 |
| Conread position: | 153-548 |
| Cow position: | chr12:250535-250144 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 279 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 153-548 |
| Cow position: | chr12:758197-758595 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 282 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 153-548 |
| Cow position: | chr12:17662752-17663137 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 15, 82 |
| Conread position: | 153-548 |
| Cow position: | chr12:23138547-23138154 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 54 |
| Conread position: | 154-548 |
| Cow position: | chr12:17981200-17981583 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 152, 61 |
| Conread position: | 156-548 |
| Cow position: | chr12:24696328-24696720 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 79 |
| Conread position: | 159-548 |
| Cow position: | chr12:62423-62033 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 160-548 |
| Cow position: | chr12:3094837-3094461 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 145, 71 |
| Conread position: | 171-548 |
| Cow position: | chr12:25148821-25148443 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 267 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 110, 63 |
| Conread position: | 178-548 |
| Cow position: | chr12:30501444-30501815 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 58 |
| Conread position: | 244-547 |
| Cow position: | chr12:14853769-14853478 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 71 |
| Conread position: | 248-548 |
| Cow position: | chr12:8641643-8641953 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 250-528 |
| Cow position: | chr12:33283515-33283226 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 169 |
| Conread position: | 255-474 |
| Cow position: | chr12:36204623-36204854 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 61 |
Show alignments to all cow chromosomes.