Cow genome map

Conread name: Ova1-OVRM10122D05

Conread position: 1-421
Cow position:
Alignm length: 443
Alignm identity: 301
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 79

Conread position: 1-483
Cow position:
Alignm length: 520
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 235

Conread position: 1-484
Cow position:
Alignm length: 499
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 61

Conread position: 1-528
Cow position:
Alignm length: 568
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 60

Conread position: 1-538
Cow position:
Alignm length: 564
Alignm identity: 385
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 33, 25

Conread position: 1-543
Cow position:
Alignm length: 561
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 188

Conread position: 1-544
Cow position:
Alignm length: 582
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 256

Conread position: 1-546
Cow position:
Alignm length: 579
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 253

Conread position: 1-547
Cow position:
Alignm length: 583
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-547
Cow position:
Alignm length: 580
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 256

Conread position: 1-548
Cow position:
Alignm length: 565
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 147

Conread position: 1-548
Cow position:
Alignm length: 581
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 253

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 238

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 579
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 229

Conread position: 1-548
Cow position:
Alignm length: 589
Alignm identity: 380
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 85

Conread position: 1-548
Cow position:
Alignm length: 580
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 257

Conread position: 1-548
Cow position:
Alignm length: 582
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 573
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 60

Conread position: 1-548
Cow position:
Alignm length: 576
Alignm identity: 374
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 33, 253

Conread position: 1-548
Cow position:
Alignm length: 578
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 247

Conread position: 1-548
Cow position:
Alignm length: 585
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 260

Conread position: 1-548
Cow position:
Alignm length: 577
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 205

Conread position: 1-580
Cow position:
Alignm length: 608
Alignm identity: 395
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 17, 68

Conread position: 2-425
Cow position:
Alignm length: 459
Alignm identity: 299
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 250

Conread position: 2-548
Cow position:
Alignm length: 574
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 250

Conread position: 5-547
Cow position:
Alignm length: 580
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 82

Conread position: 10-546
Cow position:
Alignm length: 568
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 244

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 572
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 246

Conread position: 10-548
Cow position:
Alignm length: 545
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 251

Conread position: 10-548
Cow position:
Alignm length: 575
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 78

Conread position: 10-548
Cow position:
Alignm length: 568
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 242

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 243

Conread position: 15-548
Cow position:
Alignm length: 565
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 241

Conread position: 24-548
Cow position:
Alignm length: 540
Alignm identity: 338
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 106

Conread position: 25-548
Cow position:
Alignm length: 541
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 27-469
Cow position:
Alignm length: 463
Alignm identity: 320
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 32, 17

Conread position: 33-402
Cow position:
Alignm length: 401
Alignm identity: 275
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 29, 214

Conread position: 38-548
Cow position:
Alignm length: 538
Alignm identity: 352
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 27, 45

Conread position: 43-500
Cow position:
Alignm length: 496
Alignm identity: 340
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 112, 93

Conread position: 49-546
Cow position:
Alignm length: 520
Alignm identity: 342
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 164

Conread position: 62-548
Cow position:
Alignm length: 507
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 39

Conread position: 62-548
Cow position:
Alignm length: 514
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 192

Conread position: 66-548
Cow position:
Alignm length: 512
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 186

Conread position: 140-548
Cow position:
Alignm length: 421
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 94

Conread position: 141-548
Cow position:
Alignm length: 421
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 93

Conread position: 141-548
Cow position:
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 96

Conread position: 141-548
Cow position:
Alignm length: 421
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 95

Conread position: 153-485
Cow position:
Alignm length: 345
Alignm identity: 229
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 153, 82

Conread position: 153-548
Cow position:
Alignm length: 405
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 79

Conread position: 153-548
Cow position:
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 153-548
Cow position:
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 79

Conread position: 153-548
Cow position:
Alignm length: 408
Alignm identity: 278
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 180, 82

Conread position: 154-459
Cow position:
Alignm length: 316
Alignm identity: 207
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 81

Conread position: 154-548
Cow position:
Alignm length: 410
Alignm identity: 284
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 137, 80

Conread position: 155-548
Cow position:
Alignm length: 403
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 80

Conread position: 159-548
Cow position:
Alignm length: 401
Alignm identity: 278
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 147, 75

Conread position: 159-548
Cow position:
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 75

Conread position: 161-544
Cow position:
Alignm length: 396
Alignm identity: 270
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 13

Conread position: 178-493
Cow position:
Alignm length: 325
Alignm identity: 233
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 128, 57

Conread position: 178-519
Cow position:
Alignm length: 352
Alignm identity: 246
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 128, 56

Conread position: 249-503
Cow position:
Alignm length: 264
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 14

Conread position: 250-481
Cow position:
Alignm length: 244
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 0

Conread position: 250-548
Cow position:
Alignm length: 307
Alignm identity: 203
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 56, 199

Show alignments to all cow chromosomes.