Cow genome map
| Conread name: | Ova1-OVRM10122D05 |
| Conread position: | 1-421 |
| Cow position: | chr13:2581699-2581268 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 301 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 1-483 |
| Cow position: | chr13:5626428-5625921 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 235 |
| Conread position: | 1-484 |
| Cow position: | chr13:15279397-15278910 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 1-528 |
| Cow position: | chr13:19424027-19424580 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 1-538 |
| Cow position: | chr13:19290814-19290290 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 385 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 1-543 |
| Cow position: | chr13:3481469-3480927 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 188 |
| Conread position: | 1-544 |
| Cow position: | chr13:11796304-11795735 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 256 |
| Conread position: | 1-546 |
| Cow position: | chr13:13902256-13902820 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 253 |
| Conread position: | 1-547 |
| Cow position: | chr13:34039946-34039376 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-547 |
| Cow position: | chr13:58717951-58718521 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 256 |
| Conread position: | 1-548 |
| Cow position: | chr13:1883093-1882545 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 147 |
| Conread position: | 1-548 |
| Cow position: | chr13:4486249-4486819 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 253 |
| Conread position: | 1-548 |
| Cow position: | chr13:9300566-9301136 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 1-548 |
| Cow position: | chr13:14303588-14303020 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 238 |
| Conread position: | 1-548 |
| Cow position: | chr13:18330731-18330159 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr13:21401240-21401800 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 229 |
| Conread position: | 1-548 |
| Cow position: | chr13:21906530-21905952 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 380 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 85 |
| Conread position: | 1-548 |
| Cow position: | chr13:30240945-30241511 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 257 |
| Conread position: | 1-548 |
| Cow position: | chr13:32734792-32734221 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr13:34322564-34322014 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 1-548 |
| Cow position: | chr13:34940069-34940629 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 374 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 33, 253 |
| Conread position: | 1-548 |
| Cow position: | chr13:35759952-35760508 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 247 |
| Conread position: | 1-548 |
| Cow position: | chr13:38611616-38612190 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 260 |
| Conread position: | 1-548 |
| Cow position: | chr13:41338268-41337703 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 205 |
| Conread position: | 1-580 |
| Cow position: | chr13:11301613-11302201 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 395 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 2-425 |
| Cow position: | chr13:114433-114881 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 250 |
| Conread position: | 2-548 |
| Cow position: | chr13:34906171-34905607 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 250 |
| Conread position: | 5-547 |
| Cow position: | chr13:47536504-47537069 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 82 |
| Conread position: | 10-546 |
| Cow position: | chr13:50111873-50112430 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 244 |
| Conread position: | 10-548 |
| Cow position: | chr13:6360270-6360832 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr13:16807002-16807563 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 246 |
| Conread position: | 10-548 |
| Cow position: | chr13:19842920-19843436 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 10-548 |
| Cow position: | chr13:31609037-31608475 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 251 |
| Conread position: | 10-548 |
| Cow position: | chr13:34870365-34870926 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 10-548 |
| Cow position: | chr13:35685786-35686342 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 242 |
| Conread position: | 10-548 |
| Cow position: | chr13:36347717-36347160 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 243 |
| Conread position: | 15-548 |
| Cow position: | chr13:31989287-31989840 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 241 |
| Conread position: | 24-548 |
| Cow position: | chr13:14553185-14552660 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 338 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 25-548 |
| Cow position: | chr13:12565722-12565196 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 138 |
| Conread position: | 27-469 |
| Cow position: | chr13:30089816-30090251 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 320 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 33-402 |
| Cow position: | chr13:46599162-46598771 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 29, 214 |
| Conread position: | 38-548 |
| Cow position: | chr13:47358141-47357618 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 352 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 27, 45 |
| Conread position: | 43-500 |
| Cow position: | chr13:52279260-52279744 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 340 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 112, 93 |
| Conread position: | 49-546 |
| Cow position: | chr13:26823652-26823156 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 342 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 19, 164 |
| Conread position: | 62-548 |
| Cow position: | chr13:20564511-20564015 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 62-548 |
| Cow position: | chr13:30795252-30794749 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 192 |
| Conread position: | 66-548 |
| Cow position: | chr13:143654-143153 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 186 |
| Conread position: | 140-548 |
| Cow position: | chr13:14400522-14400111 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 141-548 |
| Cow position: | chr13:19637709-19638119 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 93 |
| Conread position: | 141-548 |
| Cow position: | chr13:30469559-30469152 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 141-548 |
| Cow position: | chr13:43120992-43120583 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 153-485 |
| Cow position: | chr13:34032736-34033070 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 153, 82 |
| Conread position: | 153-548 |
| Cow position: | chr13:1591584-1591190 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 79 |
| Conread position: | 153-548 |
| Cow position: | chr13:3021915-3021519 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr13:4943960-4944356 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 79 |
| Conread position: | 153-548 |
| Cow position: | chr13:16249372-16248976 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 180, 82 |
| Conread position: | 154-459 |
| Cow position: | chr13:30431127-30430822 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 154-548 |
| Cow position: | chr13:22907699-22907303 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 284 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 137, 80 |
| Conread position: | 155-548 |
| Cow position: | chr13:34376954-34376564 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 80 |
| Conread position: | 159-548 |
| Cow position: | chr13:10732563-10732946 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 278 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 159-548 |
| Cow position: | chr13:58312908-58313298 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 161-544 |
| Cow position: | chr13:55780949-55780567 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 178-493 |
| Cow position: | chr13:43160295-43160610 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 128, 57 |
| Conread position: | 178-519 |
| Cow position: | chr13:19239503-19239844 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 128, 56 |
| Conread position: | 249-503 |
| Cow position: | chr13:27408870-27408609 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 250-481 |
| Cow position: | chr13:19265169-19264926 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 250-548 |
| Cow position: | chr13:18945859-18945562 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 56, 199 |
Show alignments to all cow chromosomes.