Cow genome map
| Conread name: | Ova1-OVRM10122D05 |
| Conread position: | 1-310 |
| Cow position: | chr14:48851659-48851972 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 1-406 |
| Cow position: | chr14:11835901-11836328 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 223 |
| Conread position: | 1-414 |
| Cow position: | chr14:8899551-8899979 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 256 |
| Conread position: | 1-463 |
| Cow position: | chr14:41766342-41766824 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 253 |
| Conread position: | 1-493 |
| Cow position: | chr14:46548417-46548921 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 358 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 71, 33 |
| Conread position: | 1-519 |
| Cow position: | chr14:20785368-20785902 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 197 |
| Conread position: | 1-527 |
| Cow position: | chr14:1736257-1735704 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 375 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 126 |
| Conread position: | 1-545 |
| Cow position: | chr14:9510286-9509730 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 387 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 1-545 |
| Cow position: | chr14:19449265-19448717 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 387 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 32, 196 |
| Conread position: | 1-547 |
| Cow position: | chr14:17689392-17689963 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 255 |
| Conread position: | 1-547 |
| Cow position: | chr14:44235915-44236483 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 101 |
| Conread position: | 1-548 |
| Cow position: | chr14:192447-192986 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 133 |
| Conread position: | 1-548 |
| Cow position: | chr14:5531604-5532176 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 193 |
| Conread position: | 1-548 |
| Cow position: | chr14:11151648-11151080 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 253 |
| Conread position: | 1-548 |
| Cow position: | chr14:11475026-11474454 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 254 |
| Conread position: | 1-548 |
| Cow position: | chr14:14421142-14420569 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 1-548 |
| Cow position: | chr14:16917460-16916891 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 1-548 |
| Cow position: | chr14:17771913-17771339 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 1-548 |
| Cow position: | chr14:27052901-27052345 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 29 |
| Conread position: | 1-548 |
| Cow position: | chr14:32449234-32449792 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 254 |
| Conread position: | 1-548 |
| Cow position: | chr14:32584761-32584189 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr14:34905790-34906361 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr14:38915814-38915245 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 1-548 |
| Cow position: | chr14:39149179-39149713 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 364 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 1-548 |
| Cow position: | chr14:41445269-41445841 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 188 |
| Conread position: | 1-548 |
| Cow position: | chr14:46302168-46302740 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 258 |
| Conread position: | 1-548 |
| Cow position: | chr14:46375578-46376146 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 89 |
| Conread position: | 1-548 |
| Cow position: | chr14:50144498-50145062 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 237 |
| Conread position: | 1-550 |
| Cow position: | chr14:40344803-40345358 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 262 |
| Conread position: | 2-548 |
| Cow position: | chr14:12740774-12740213 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 247 |
| Conread position: | 3-505 |
| Cow position: | chr14:44292899-44293428 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 359 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 3-548 |
| Cow position: | chr14:15272995-15272426 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 253 |
| Conread position: | 5-548 |
| Cow position: | chr14:23528721-23528160 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 369 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 27, 223 |
| Conread position: | 9-548 |
| Cow position: | chr14:25429928-25430486 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 362 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 10-546 |
| Cow position: | chr14:23255065-23254504 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 249 |
| Conread position: | 10-548 |
| Cow position: | chr14:1660729-1661282 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr14:2288534-2289089 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 240 |
| Conread position: | 10-548 |
| Cow position: | chr14:22104284-22103721 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr14:28580799-28580245 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 215 |
| Conread position: | 10-548 |
| Cow position: | chr14:33679330-33679883 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 45 |
| Conread position: | 11-548 |
| Cow position: | chr14:29045401-29044837 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 249 |
| Conread position: | 12-548 |
| Cow position: | chr14:7475134-7475693 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 244 |
| Conread position: | 12-548 |
| Cow position: | chr14:38149403-38149957 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 225 |
| Conread position: | 17-325 |
| Cow position: | chr14:35256495-35256196 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 18-548 |
| Cow position: | chr14:11563820-11564371 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 242 |
| Conread position: | 19-548 |
| Cow position: | chr14:9810963-9811517 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 239 |
| Conread position: | 30-469 |
| Cow position: | chr14:36344957-36344521 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 115 |
| Conread position: | 40-546 |
| Cow position: | chr14:12859333-12858803 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 216 |
| Conread position: | 47-548 |
| Cow position: | chr14:13275387-13275909 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 352 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 21, 62 |
| Conread position: | 62-533 |
| Cow position: | chr14:35419212-35419698 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 322 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 71, 191 |
| Conread position: | 66-538 |
| Cow position: | chr14:48827545-48828032 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 68, 185 |
| Conread position: | 96-548 |
| Cow position: | chr14:33582441-33581967 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 151 |
| Conread position: | 104-477 |
| Cow position: | chr14:13620043-13619665 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 275 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 138-546 |
| Cow position: | chr14:45997118-45996709 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 287 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 16, 99 |
| Conread position: | 141-548 |
| Cow position: | chr14:1726573-1726982 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 141-548 |
| Cow position: | chr14:44554280-44554682 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 286 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 148-548 |
| Cow position: | chr14:41478185-41478585 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 277 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 158, 10 |
| Conread position: | 152-548 |
| Cow position: | chr14:45191978-45192362 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 279 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 154, 31 |
| Conread position: | 153-489 |
| Cow position: | chr14:43795166-43794829 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-497 |
| Cow position: | chr14:9253969-9254314 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 153-498 |
| Cow position: | chr14:9876882-9876548 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 151, 72 |
| Conread position: | 153-548 |
| Cow position: | chr14:15337193-15336797 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr14:30593820-30593427 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 274 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr14:34629762-34629359 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr14:50069751-50069362 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 153, 79 |
| Conread position: | 154-497 |
| Cow position: | chr14:45237771-45238111 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 113, 81 |
| Conread position: | 154-548 |
| Cow position: | chr14:9512490-9512096 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 154-548 |
| Cow position: | chr14:28587836-28587449 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 154-548 |
| Cow position: | chr14:34394179-34394574 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 127, 83 |
| Conread position: | 154-548 |
| Cow position: | chr14:45576093-45576482 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 147, 80 |
| Conread position: | 155-548 |
| Cow position: | chr14:40968597-40968991 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 79 |
| Conread position: | 157-548 |
| Cow position: | chr14:44077239-44076849 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 77 |
| Conread position: | 159-548 |
| Cow position: | chr14:38459705-38459317 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 159-548 |
| Cow position: | chr14:45789424-45789807 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 159-548 |
| Cow position: | chr14:46637086-46636699 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 274 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 160-428 |
| Cow position: | chr14:27829695-27829959 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 146, 19 |
| Conread position: | 162-539 |
| Cow position: | chr14:34353949-34354308 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 73 |
| Conread position: | 168-548 |
| Cow position: | chr14:29891580-29891205 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 138, 68 |
| Conread position: | 185-548 |
| Cow position: | chr14:25363997-25363638 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 188-546 |
| Cow position: | chr14:13282265-13282619 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 96, 47 |
| Conread position: | 189-548 |
| Cow position: | chr14:21200397-21200759 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 117, 45 |
| Conread position: | 248-548 |
| Cow position: | chr14:25694582-25694894 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 59, 198 |
| Conread position: | 256-519 |
| Cow position: | chr14:13091266-13091530 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 256-548 |
| Cow position: | chr14:40775324-40775607 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 83 |
Show alignments to all cow chromosomes.