Cow genome map

Conread name: Ova1-OVRM10122D05

Conread position: 1-415
Cow position: chr15:29341783-29341342 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 306
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 261

Conread position: 1-427
Cow position: chr15:52440409-52440845 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 297
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 32, 254

Conread position: 1-454
Cow position: chr15:6487729-6488203 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 326
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 58, 130

Conread position: 1-499
Cow position: chr15:4768461-4768972 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 345
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 54

Conread position: 1-502
Cow position: chr15:13389101-13388573 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 253

Conread position: 1-545
Cow position: chr15:17295280-17295837 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 375
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 254

Conread position: 1-547
Cow position: chr15:20330120-20329575 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 1-547
Cow position: chr15:21663474-21662903 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position: chr15:313532-312961 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr15:2410434-2409881 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 377
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 108

Conread position: 1-548
Cow position: chr15:3258239-3257665 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 212

Conread position: 1-548
Cow position: chr15:4688316-4688873 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 128

Conread position: 1-548
Cow position: chr15:4924433-4924998 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 97

Conread position: 1-548
Cow position: chr15:6551342-6550774 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 35

Conread position: 1-548
Cow position: chr15:7547145-7547708 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 196

Conread position: 1-548
Cow position: chr15:7552889-7553447 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 108

Conread position: 1-548
Cow position: chr15:8101726-8102291 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position: chr15:9522934-9522360 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 13

Conread position: 1-548
Cow position: chr15:13679657-13680215 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 55

Conread position: 1-548
Cow position: chr15:13682605-13683183 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 259

Conread position: 1-548
Cow position: chr15:17035354-17034787 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 1-548
Cow position: chr15:19735531-19734959 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr15:21946654-21946140 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 68

Conread position: 1-548
Cow position: chr15:24287228-24286680 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 372
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 33, 65

Conread position: 1-548
Cow position: chr15:32491620-32491048 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position: chr15:35644183-35643611 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 206

Conread position: 1-548
Cow position: chr15:35751027-35750456 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 258

Conread position: 1-548
Cow position: chr15:36623395-36622822 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 130

Conread position: 1-548
Cow position: chr15:36670437-36671016 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 248

Conread position: 1-548
Cow position: chr15:38982930-38983501 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 25

Conread position: 1-548
Cow position: chr15:42939179-42939751 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 263

Conread position: 1-548
Cow position: chr15:44072716-44073287 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 235

Conread position: 1-548
Cow position: chr15:49198705-49199259 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 81

Conread position: 1-548
Cow position: chr15:51220010-51220582 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 1-563
Cow position: chr15:15650116-15649560 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 149

Conread position: 1-575
Cow position: chr15:21825133-21825732 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 2-548
Cow position: chr15:8628581-8629148 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 255

Conread position: 2-548
Cow position: chr15:23773586-23774143 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 245

Conread position: 3-548
Cow position: chr15:2927517-2928099 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 388
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 35, 14

Conread position: 3-548
Cow position: chr15:15344833-15344263 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 253

Conread position: 4-548
Cow position: chr15:17699497-17700025 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 38

Conread position: 5-548
Cow position: chr15:4653744-4654308 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 252

Conread position: 7-548
Cow position: chr15:21966315-21966874 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 7-548
Cow position: chr15:23275297-23274745 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 76

Conread position: 10-422
Cow position: chr15:52208818-52209252 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 300
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 24, 247

Conread position: 10-469
Cow position: chr15:22540541-22540056 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 334
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 21, 249

Conread position: 10-497
Cow position: chr15:2014777-2015280 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 245

Conread position: 10-543
Cow position: chr15:7270618-7271170 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 246

Conread position: 10-548
Cow position: chr15:3153286-3152726 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 245

Conread position: 10-548
Cow position: chr15:5641308-5640751 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 245

Conread position: 10-548
Cow position: chr15:7565280-7565843 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr15:13430101-13430664 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 248

Conread position: 10-548
Cow position: chr15:18229343-18229905 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr15:18265484-18264922 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr15:25132233-25132797 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr15:31270594-31270031 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 228

Conread position: 11-482
Cow position: chr15:1849910-1849419 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 338
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 74

Conread position: 14-548
Cow position: chr15:7318850-7319406 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 244

Conread position: 15-546
Cow position: chr15:50120461-50119906 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 241

Conread position: 15-548
Cow position: chr15:36941102-36940542 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 223

Conread position: 19-502
Cow position: chr15:7236595-7237092 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 335
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 18, 53

Conread position: 19-548
Cow position: chr15:6616084-6616638 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 239

Conread position: 22-484
Cow position: chr15:44781361-44781841 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 319
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 42

Conread position: 25-547
Cow position: chr15:6649097-6648571 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 17

Conread position: 25-563
Cow position: chr15:5243736-5243179 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 380
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 9, 232

Conread position: 26-547
Cow position: chr15:6463384-6463912 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 230

Conread position: 31-526
Cow position: chr15:7840636-7841152 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 224

Conread position: 31-548
Cow position: chr15:1785069-1785606 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 225

Conread position: 33-517
Cow position: chr15:1328145-1328648 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 342
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 29, 223

Conread position: 34-547
Cow position: chr15:53185473-53186007 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 345
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 223

Conread position: 39-450
Cow position: chr15:32741275-32741708 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 302
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 29, 217

Conread position: 39-499
Cow position: chr15:18660625-18661108 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 218

Conread position: 46-575
Cow position: chr15:7058044-7058594 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 483

Conread position: 49-480
Cow position: chr15:4896038-4895598 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 291
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 149

Conread position: 57-425
Cow position: chr15:6493265-6493639 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 242
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 98, 17

Conread position: 64-548
Cow position: chr15:18020031-18019543 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 96

Conread position: 84-439
Cow position: chr15:19215924-19215574 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 76, 165

Conread position: 141-548
Cow position: chr15:23797557-23797972 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 61

Conread position: 141-548
Cow position: chr15:42532480-42532890 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 96

Conread position: 152-548
Cow position: chr15:12439195-12439587 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 267
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 215, 16

Conread position: 153-425
Cow position: chr15:47340954-47341233 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 153, 13

Conread position: 153-474
Cow position: chr15:16967056-16966729 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 87

Conread position: 153-539
Cow position: chr15:20405172-20404788 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 153-548
Cow position: chr15:4140465-4140069 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 153-548
Cow position: chr15:50151144-50151540 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 280
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 175, 81

Conread position: 154-546
Cow position: chr15:30044842-30045236 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 270
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 152, 80

Conread position: 154-548
Cow position: chr15:26591901-26591506 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 81

Conread position: 154-548
Cow position: chr15:26932481-26932882 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 274
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 20, 80

Conread position: 155-548
Cow position: chr15:21155908-21156306 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 80

Conread position: 158-548
Cow position: chr15:11627857-11628242 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 177, 76

Conread position: 158-548
Cow position: chr15:32858315-32858706 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 77

Conread position: 159-548
Cow position: chr15:7587331-7586941 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 76

Conread position: 160-548
Cow position: chr15:10736009-10736408 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 271
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 146, 77

Conread position: 168-548
Cow position: chr15:3754430-3754813 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 57, 8

Conread position: 171-548
Cow position: chr15:7963573-7963195 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 260
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 63

Conread position: 180-547
Cow position: chr15:41359476-41359842 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 126, 57

Conread position: 187-526
Cow position: chr15:22732304-22731967 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 119, 46

Conread position: 189-542
Cow position: chr15:30639185-30638843 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 46

Conread position: 248-548
Cow position: chr15:21367089-21366780 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 58, 74

Conread position: 250-500
Cow position: chr15:19654581-19654842 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 56, 66

Conread position: 250-528
Cow position: chr15:13980848-13981136 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 0

Show alignments to all cow chromosomes.