Cow genome map

Conread name: Ova1-OVRM10122D05

Conread position: 1-233
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 1-380
Cow position:
Alignm length: 414
Alignm identity: 270
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 252

Conread position: 1-382
Cow position:
Alignm length: 414
Alignm identity: 281
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 254

Conread position: 1-382
Cow position:
Alignm length: 413
Alignm identity: 283
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 256

Conread position: 1-478
Cow position:
Alignm length: 508
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 89

Conread position: 1-492
Cow position:
Alignm length: 511
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 16

Conread position: 1-537
Cow position:
Alignm length: 559
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 243

Conread position: 1-546
Cow position:
Alignm length: 581
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-546
Cow position:
Alignm length: 581
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-546
Cow position:
Alignm length: 583
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 235

Conread position: 1-547
Cow position:
Alignm length: 582
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 254

Conread position: 1-547
Cow position:
Alignm length: 581
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 108

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 254

Conread position: 1-548
Cow position:
Alignm length: 580
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 253

Conread position: 1-548
Cow position:
Alignm length: 582
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 196

Conread position: 1-548
Cow position:
Alignm length: 580
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 250

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 254

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 25

Conread position: 1-548
Cow position:
Alignm length: 581
Alignm identity: 380
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 256

Conread position: 1-548
Cow position:
Alignm length: 585
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 248

Conread position: 1-548
Cow position:
Alignm length: 585
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 257

Conread position: 1-548
Cow position:
Alignm length: 585
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 260

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 256

Conread position: 1-548
Cow position:
Alignm length: 578
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 1-548
Cow position:
Alignm length: 582
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 571
Alignm identity: 380
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 130, 40

Conread position: 1-548
Cow position:
Alignm length: 582
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 212

Conread position: 1-548
Cow position:
Alignm length: 574
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 23

Conread position: 1-548
Cow position:
Alignm length: 574
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 144

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 254

Conread position: 2-548
Cow position:
Alignm length: 577
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 253

Conread position: 2-548
Cow position:
Alignm length: 577
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 20

Conread position: 3-529
Cow position:
Alignm length: 553
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 16

Conread position: 4-447
Cow position:
Alignm length: 469
Alignm identity: 312
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 248

Conread position: 5-544
Cow position:
Alignm length: 558
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 70

Conread position: 5-547
Cow position:
Alignm length: 569
Alignm identity: 370
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 131, 19

Conread position: 5-548
Cow position:
Alignm length: 579
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 256

Conread position: 7-548
Cow position:
Alignm length: 576
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 250

Conread position: 9-464
Cow position:
Alignm length: 489
Alignm identity: 324
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 31

Conread position: 9-548
Cow position:
Alignm length: 574
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 245

Conread position: 10-410
Cow position:
Alignm length: 439
Alignm identity: 297
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 263

Conread position: 10-528
Cow position:
Alignm length: 554
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-547
Cow position:
Alignm length: 554
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 66

Conread position: 10-548
Cow position:
Alignm length: 575
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 573
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position:
Alignm length: 571
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 244

Conread position: 10-548
Cow position:
Alignm length: 575
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position:
Alignm length: 573
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 247

Conread position: 10-548
Cow position:
Alignm length: 575
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 7

Conread position: 10-548
Cow position:
Alignm length: 572
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 246

Conread position: 10-548
Cow position:
Alignm length: 572
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 11-548
Cow position:
Alignm length: 575
Alignm identity: 384
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 20

Conread position: 16-548
Cow position:
Alignm length: 556
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 76

Conread position: 22-548
Cow position:
Alignm length: 560
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 237

Conread position: 22-548
Cow position:
Alignm length: 565
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 236

Conread position: 23-542
Cow position:
Alignm length: 531
Alignm identity: 342
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 206

Conread position: 31-548
Cow position:
Alignm length: 548
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 196

Conread position: 31-548
Cow position:
Alignm length: 549
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 223

Conread position: 32-497
Cow position:
Alignm length: 492
Alignm identity: 318
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 202

Conread position: 32-547
Cow position:
Alignm length: 549
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 173

Conread position: 50-489
Cow position:
Alignm length: 464
Alignm identity: 318
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 80, 18

Conread position: 134-549
Cow position:
Alignm length: 420
Alignm identity: 280
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 207, 7

Conread position: 153-415
Cow position:
Alignm length: 271
Alignm identity: 184
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 153, 81

Conread position: 153-415
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 153, 81

Conread position: 153-548
Cow position:
Alignm length: 407
Alignm identity: 277
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 153, 20

Conread position: 153-548
Cow position:
Alignm length: 407
Alignm identity: 284
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 36

Conread position: 153-548
Cow position:
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 79

Conread position: 154-442
Cow position:
Alignm length: 292
Alignm identity: 197
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 152, 80

Conread position: 154-502
Cow position:
Alignm length: 362
Alignm identity: 239
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 152, 80

Conread position: 154-548
Cow position:
Alignm length: 405
Alignm identity: 275
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 152, 80

Conread position: 158-547
Cow position:
Alignm length: 402
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 76

Conread position: 160-529
Cow position:
Alignm length: 382
Alignm identity: 264
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 23, 71

Conread position: 160-548
Cow position:
Alignm length: 400
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 29

Conread position: 167-548
Cow position:
Alignm length: 385
Alignm identity: 248
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 168, 67

Conread position: 201-500
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 36

Conread position: 246-432
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 163

Conread position: 248-548
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 56, 64

Conread position: 255-484
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 85

Show alignments to all cow chromosomes.