Cow genome map
| Conread name: | Ova1-OVRM10122D05 |
| Conread position: | 1-415 |
| Cow position: | chr18:38090652-38090219 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 256 |
| Conread position: | 1-492 |
| Cow position: | chr18:16870978-16871493 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 256 |
| Conread position: | 1-519 |
| Cow position: | chr18:4953448-4953982 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 1-528 |
| Cow position: | chr18:37491515-37492054 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 249 |
| Conread position: | 1-544 |
| Cow position: | chr18:10977714-10978276 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 1-546 |
| Cow position: | chr18:14128570-14128013 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 1-547 |
| Cow position: | chr18:33271347-33271912 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 1-548 |
| Cow position: | chr18:3361776-3362339 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 378 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 33, 256 |
| Conread position: | 1-548 |
| Cow position: | chr18:13509330-13508786 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 104 |
| Conread position: | 1-548 |
| Cow position: | chr18:14418681-14419252 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 258 |
| Conread position: | 1-548 |
| Cow position: | chr18:16173906-16173338 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 252 |
| Conread position: | 1-548 |
| Cow position: | chr18:23801727-23802298 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr18:24452505-24453085 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 384 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 1-548 |
| Cow position: | chr18:25923097-25923661 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 1-548 |
| Cow position: | chr18:28969582-28969014 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 213 |
| Conread position: | 1-548 |
| Cow position: | chr18:29863901-29863329 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr18:36775980-36776551 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 256 |
| Conread position: | 1-548 |
| Cow position: | chr18:40483699-40484275 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 258 |
| Conread position: | 1-548 |
| Cow position: | chr18:51484302-51484866 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 145 |
| Conread position: | 1-548 |
| Cow position: | chr18:54167943-54167382 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 246 |
| Conread position: | 2-497 |
| Cow position: | chr18:15857877-15858391 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 98 |
| Conread position: | 3-363 |
| Cow position: | chr18:36252984-36252609 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 31, 239 |
| Conread position: | 3-548 |
| Cow position: | chr18:22681504-22682061 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 387 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 4-548 |
| Cow position: | chr18:26549476-26550036 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 252 |
| Conread position: | 5-233 |
| Cow position: | chr18:37156049-37155804 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 187 |
| Conread position: | 10-497 |
| Cow position: | chr18:10221743-10222254 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-547 |
| Cow position: | chr18:35295892-35296442 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 10-548 |
| Cow position: | chr18:603751-603189 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 247 |
| Conread position: | 10-548 |
| Cow position: | chr18:11869199-11869762 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 221 |
| Conread position: | 10-548 |
| Cow position: | chr18:24619140-24619704 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 249 |
| Conread position: | 10-548 |
| Cow position: | chr18:32165219-32164656 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 248 |
| Conread position: | 10-548 |
| Cow position: | chr18:32437389-32436826 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr18:47744464-47745028 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 22-499 |
| Cow position: | chr18:41838389-41837886 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 235 |
| Conread position: | 31-548 |
| Cow position: | chr18:49782542-49782004 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 226 |
| Conread position: | 41-548 |
| Cow position: | chr18:25354268-25354792 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 45-443 |
| Cow position: | chr18:44181255-44180845 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 53-390 |
| Cow position: | chr18:21796890-21797244 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 81, 200 |
| Conread position: | 62-548 |
| Cow position: | chr18:32656341-32656846 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 188 |
| Conread position: | 87-545 |
| Cow position: | chr18:16391412-16390944 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 327 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 48, 135 |
| Conread position: | 139-532 |
| Cow position: | chr18:36114573-36114177 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 12, 52 |
| Conread position: | 141-505 |
| Cow position: | chr18:39273551-39273919 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 153-451 |
| Cow position: | chr18:35292724-35293019 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 175, 60 |
| Conread position: | 153-489 |
| Cow position: | chr18:42242155-42241818 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 140, 78 |
| Conread position: | 153-548 |
| Cow position: | chr18:5202368-5202764 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr18:22182658-22182264 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr18:24037964-24037571 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 81 |
| Conread position: | 154-548 |
| Cow position: | chr18:14478967-14479359 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 82 |
| Conread position: | 159-548 |
| Cow position: | chr18:46874561-46874183 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 117, 75 |
| Conread position: | 160-548 |
| Cow position: | chr18:30877376-30876990 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 141, 74 |
| Conread position: | 169-548 |
| Cow position: | chr18:2297206-2296829 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 170-548 |
| Cow position: | chr18:48529008-48529392 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 178-546 |
| Cow position: | chr18:19310073-19310440 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 260 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 128, 56 |
| Conread position: | 189-529 |
| Cow position: | chr18:20270499-20270841 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 250-466 |
| Cow position: | chr18:16151497-16151720 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 251-540 |
| Cow position: | chr18:17335761-17335468 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 55, 89 |
| Conread position: | 255-539 |
| Cow position: | chr18:28268942-28268653 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 54, 85 |
Show alignments to all cow chromosomes.