Cow genome map
| Conread name: | Ova1-OVRM10122D05 |
| Conread position: | 1-499 |
| Cow position: | chr19:21338122-21337600 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 212 |
| Conread position: | 1-519 |
| Cow position: | chr19:39695973-39696518 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 362 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 33, 258 |
| Conread position: | 1-546 |
| Cow position: | chr19:30560858-30561429 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 1-548 |
| Cow position: | chr19:207215-207781 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 1-548 |
| Cow position: | chr19:1151385-1151943 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 381 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 1-548 |
| Cow position: | chr19:2587906-2588470 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 1-548 |
| Cow position: | chr19:4388291-4388864 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr19:5781819-5781253 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 1-548 |
| Cow position: | chr19:7481226-7480653 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 257 |
| Conread position: | 1-548 |
| Cow position: | chr19:16479156-16478586 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr19:30517512-30518085 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr19:33876126-33876697 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 246 |
| Conread position: | 1-548 |
| Cow position: | chr19:33944276-33944848 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 255 |
| Conread position: | 1-548 |
| Cow position: | chr19:35981488-35982052 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 74 |
| Conread position: | 1-548 |
| Cow position: | chr19:38559577-38559008 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 257 |
| Conread position: | 1-548 |
| Cow position: | chr19:39182829-39182259 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr19:40849776-40849208 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 253 |
| Conread position: | 2-528 |
| Cow position: | chr19:35612118-35611564 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 2-548 |
| Cow position: | chr19:33640784-33641352 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 97 |
| Conread position: | 3-548 |
| Cow position: | chr19:36418708-36419263 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 252 |
| Conread position: | 7-546 |
| Cow position: | chr19:2261714-2261164 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 57 |
| Conread position: | 8-304 |
| Cow position: | chr19:42304012-42303714 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 111 |
| Conread position: | 9-548 |
| Cow position: | chr19:19388551-19389115 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 249 |
| Conread position: | 10-392 |
| Cow position: | chr19:16317891-16317486 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 249 |
| Conread position: | 10-437 |
| Cow position: | chr19:15445145-15444695 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-454 |
| Cow position: | chr19:52148830-52148363 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 325 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-489 |
| Cow position: | chr19:12651453-12651957 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 247 |
| Conread position: | 10-546 |
| Cow position: | chr19:165407-164853 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 245 |
| Conread position: | 10-548 |
| Cow position: | chr19:41053-41614 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr19:20611052-20611615 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr19:40016860-40016306 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 12-548 |
| Cow position: | chr19:30758205-30758740 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 360 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 21-546 |
| Cow position: | chr19:28596111-28596655 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 45-548 |
| Cow position: | chr19:28801803-28801291 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 56-548 |
| Cow position: | chr19:344154-344667 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 348 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 81, 14 |
| Conread position: | 78-548 |
| Cow position: | chr19:5901837-5902308 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 103-518 |
| Cow position: | chr19:1662865-1663277 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 284 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 153-502 |
| Cow position: | chr19:38811278-38811623 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 140, 81 |
| Conread position: | 153-522 |
| Cow position: | chr19:10194527-10194891 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-538 |
| Cow position: | chr19:55980004-55979621 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 153-548 |
| Cow position: | chr19:37653063-37653456 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr19:42465876-42466274 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 82 |
| Conread position: | 153-548 |
| Cow position: | chr19:48533613-48534009 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 79 |
| Conread position: | 154-548 |
| Cow position: | chr19:35621407-35621810 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 83 |
| Conread position: | 155-548 |
| Cow position: | chr19:55842887-55843285 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 79 |
| Conread position: | 158-548 |
| Cow position: | chr19:42724567-42724947 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 148, 77 |
| Conread position: | 159-548 |
| Cow position: | chr19:33594592-33594218 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 147, 14 |
| Conread position: | 167-548 |
| Cow position: | chr19:39750123-39750499 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 139, 64 |
| Conread position: | 168-548 |
| Cow position: | chr19:37844876-37844499 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 66 |
| Conread position: | 179-546 |
| Cow position: | chr19:33624500-33624858 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 117, 55 |
| Conread position: | 196-492 |
| Cow position: | chr19:36599965-36600263 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 8, 49 |
| Conread position: | 212-548 |
| Cow position: | chr19:40247721-40248058 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 247-548 |
| Cow position: | chr19:39603489-39603189 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 59, 125 |
| Conread position: | 249-500 |
| Cow position: | chr19:15871666-15871405 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 249-519 |
| Cow position: | chr19:5110361-5110082 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 132 |
Show alignments to all cow chromosomes.