Cow genome map


           Conread name:
           Ova1-OVRM10122D05
        

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               33, 185
               

               Conread position:
               1-393
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               292
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               1-474
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 14
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 134
               

               Conread position:
               1-528
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 226
               

               Conread position:
               1-547
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 257
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 96
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 58
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 256
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 251
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 235
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 255
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 240
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 255
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 258
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 254
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               376
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 253
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 258
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               384
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               32, 258
               

               Conread position:
               2-425
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               31, 68
               

               Conread position:
               2-548
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 254
               

               Conread position:
               3-548
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 254
               

               Conread position:
               8-548
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 235
               

               Conread position:
               10-548
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 249
               

               Conread position:
               10-548
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 248
               

               Conread position:
               10-548
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 248
               

               Conread position:
               10-548
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 248
               

               Conread position:
               10-548
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 251
               

               Conread position:
               10-548
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 243
               

               Conread position:
               10-548
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 248
               

               Conread position:
               10-548
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 249
               

               Conread position:
               10-548
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 248
               

               Conread position:
               11-548
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 247
               

               Conread position:
               11-548
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 239
               

               Conread position:
               17-550
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 83
               

               Conread position:
               25-497
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               338
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               11, 235
               

               Conread position:
               25-546
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 227
               

               Conread position:
               33-548
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 218
               

               Conread position:
               34-548
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               345
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               121, 7
               

               Conread position:
               39-548
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 207
               

               Conread position:
               41-547
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               62-548
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 186
               

               Conread position:
               137-548
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 97
               

               Conread position:
               141-548
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               291
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               13, 76
               

               Conread position:
               153-527
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 26
               

               Conread position:
               153-548
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 81
               

               Conread position:
               153-548
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               185, 21
               

               Conread position:
               153-548
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               277
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               153, 61
               

               Conread position:
               153-548
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 77
               

               Conread position:
               154-548
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               110, 82
               

               Conread position:
               159-547
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               267
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               147, 60
               

               Conread position:
               159-548
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 75
               

               Conread position:
               159-548
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 75
               

               Conread position:
               160-548
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               141, 52
               

               Conread position:
               160-548
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               146, 75
               

               Conread position:
               161-457
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               145, 73
               

               Conread position:
               167-528
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 65
               

               Conread position:
               167-550
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 16
               

               Conread position:
               178-533
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               128, 56
               

               Conread position:
               187-500
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               117, 47
               

               Conread position:
               199-536
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               107, 36
               

               Conread position:
               250-548
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               112, 56
               
Show alignments to all cow chromosomes.