Cow genome map
| Conread name: | Ova1-OVRM10122D05 |
| Conread position: | 1-383 |
| Cow position: | chr20:38747696-38747302 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 33, 185 |
| Conread position: | 1-393 |
| Cow position: | chr20:22696374-22695968 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 33, 68 |
| Conread position: | 1-474 |
| Cow position: | chr20:5225882-5225397 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 1-497 |
| Cow position: | chr20:30776408-30776907 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 134 |
| Conread position: | 1-528 |
| Cow position: | chr20:10493880-10494423 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 226 |
| Conread position: | 1-547 |
| Cow position: | chr20:35159908-35159342 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 257 |
| Conread position: | 1-548 |
| Cow position: | chr20:1534870-1534296 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 96 |
| Conread position: | 1-548 |
| Cow position: | chr20:5076673-5077230 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 1-548 |
| Cow position: | chr20:10922246-10921679 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 30 |
| Conread position: | 1-548 |
| Cow position: | chr20:12435724-12435155 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 256 |
| Conread position: | 1-548 |
| Cow position: | chr20:14511391-14511939 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 251 |
| Conread position: | 1-548 |
| Cow position: | chr20:23805205-23804636 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 235 |
| Conread position: | 1-548 |
| Cow position: | chr20:25845948-25845379 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr20:27345294-27344740 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 240 |
| Conread position: | 1-548 |
| Cow position: | chr20:27876154-27876725 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr20:28561212-28560641 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 258 |
| Conread position: | 1-548 |
| Cow position: | chr20:28724429-28725001 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 254 |
| Conread position: | 1-548 |
| Cow position: | chr20:32085782-32085210 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 376 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 31, 253 |
| Conread position: | 1-548 |
| Cow position: | chr20:36419045-36418475 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 258 |
| Conread position: | 1-548 |
| Cow position: | chr20:37169555-37168984 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 384 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 32, 258 |
| Conread position: | 2-425 |
| Cow position: | chr20:10867116-10866679 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 31, 68 |
| Conread position: | 2-548 |
| Cow position: | chr20:35127344-35127913 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 254 |
| Conread position: | 3-548 |
| Cow position: | chr20:12568637-12568072 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 254 |
| Conread position: | 8-548 |
| Cow position: | chr20:28035175-28034621 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 235 |
| Conread position: | 10-548 |
| Cow position: | chr20:825461-826024 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 249 |
| Conread position: | 10-548 |
| Cow position: | chr20:3809088-3808529 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr20:13506877-13506317 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 248 |
| Conread position: | 10-548 |
| Cow position: | chr20:14925961-14925398 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr20:19440596-19441152 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 251 |
| Conread position: | 10-548 |
| Cow position: | chr20:19844466-19845020 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 243 |
| Conread position: | 10-548 |
| Cow position: | chr20:22061496-22060933 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr20:35108506-35107943 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 249 |
| Conread position: | 10-548 |
| Cow position: | chr20:39233913-39234475 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 11-548 |
| Cow position: | chr20:6136307-6135747 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 247 |
| Conread position: | 11-548 |
| Cow position: | chr20:21719249-21719801 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 239 |
| Conread position: | 17-550 |
| Cow position: | chr20:28294007-28294558 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 83 |
| Conread position: | 25-497 |
| Cow position: | chr20:12693735-12694235 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 338 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 11, 235 |
| Conread position: | 25-546 |
| Cow position: | chr20:14721672-14721136 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 227 |
| Conread position: | 33-548 |
| Cow position: | chr20:31785662-31785129 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 218 |
| Conread position: | 34-548 |
| Cow position: | chr20:30397390-30396887 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 345 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 121, 7 |
| Conread position: | 39-548 |
| Cow position: | chr20:34967703-34968226 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 207 |
| Conread position: | 41-547 |
| Cow position: | chr20:17658515-17657988 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 62-548 |
| Cow position: | chr20:9338765-9339268 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 186 |
| Conread position: | 137-548 |
| Cow position: | chr20:30688705-30689120 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 141-548 |
| Cow position: | chr20:6476352-6476762 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 291 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 153-527 |
| Cow position: | chr20:13788958-13789331 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 26 |
| Conread position: | 153-548 |
| Cow position: | chr20:753286-753685 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr20:14930101-14930488 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 275 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 185, 21 |
| Conread position: | 153-548 |
| Cow position: | chr20:15294886-15295264 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 277 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 153, 61 |
| Conread position: | 153-548 |
| Cow position: | chr20:22208470-22208865 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 77 |
| Conread position: | 154-548 |
| Cow position: | chr20:27994689-27994281 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 110, 82 |
| Conread position: | 159-547 |
| Cow position: | chr20:8098642-8099030 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 267 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 147, 60 |
| Conread position: | 159-548 |
| Cow position: | chr20:8971037-8970649 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 159-548 |
| Cow position: | chr20:19306531-19306141 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 160-548 |
| Cow position: | chr20:13816479-13816866 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 141, 52 |
| Conread position: | 160-548 |
| Cow position: | chr20:34642865-34643261 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 146, 75 |
| Conread position: | 161-457 |
| Cow position: | chr20:3509743-3510039 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 145, 73 |
| Conread position: | 167-528 |
| Cow position: | chr20:5538044-5538406 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 65 |
| Conread position: | 167-550 |
| Cow position: | chr20:33296083-33295702 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 16 |
| Conread position: | 178-533 |
| Cow position: | chr20:6259427-6259063 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 128, 56 |
| Conread position: | 187-500 |
| Cow position: | chr20:19669569-19669267 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 117, 47 |
| Conread position: | 199-536 |
| Cow position: | chr20:11719672-11720009 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 107, 36 |
| Conread position: | 250-548 |
| Cow position: | chr20:3677424-3677130 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 112, 56 |
Show alignments to all cow chromosomes.