Cow genome map
| Conread name: | Ova1-OVRM10122D05 |
| Conread position: | 1-431 |
| Cow position: | chr21:34656741-34657195 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 1-499 |
| Cow position: | chr21:1285469-1284953 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 255 |
| Conread position: | 1-545 |
| Cow position: | chr21:35390360-35389800 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 206 |
| Conread position: | 1-547 |
| Cow position: | chr21:4864543-4863994 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 358 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 97 |
| Conread position: | 1-547 |
| Cow position: | chr21:26400982-26400411 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr21:44499-45057 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 1-548 |
| Cow position: | chr21:148932-149501 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 257 |
| Conread position: | 1-548 |
| Cow position: | chr21:1195322-1195892 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr21:1766742-1766165 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 263 |
| Conread position: | 1-548 |
| Cow position: | chr21:2769054-2768489 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 379 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 68, 41 |
| Conread position: | 1-548 |
| Cow position: | chr21:3781561-3782127 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 253 |
| Conread position: | 1-548 |
| Cow position: | chr21:5019930-5020500 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 253 |
| Conread position: | 1-548 |
| Cow position: | chr21:10853049-10853619 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 191 |
| Conread position: | 1-548 |
| Cow position: | chr21:13112608-13112039 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 254 |
| Conread position: | 1-548 |
| Cow position: | chr21:19352078-19351507 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 257 |
| Conread position: | 1-548 |
| Cow position: | chr21:21941763-21941203 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 380 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 1-548 |
| Cow position: | chr21:24083569-24083005 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 81 |
| Conread position: | 1-548 |
| Cow position: | chr21:25189426-25190004 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 256 |
| Conread position: | 1-548 |
| Cow position: | chr21:27066817-27066245 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 258 |
| Conread position: | 1-548 |
| Cow position: | chr21:27429335-27428762 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 198 |
| Conread position: | 1-548 |
| Cow position: | chr21:28916188-28915621 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr21:31513486-31512916 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr21:33256339-33256910 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 196 |
| Conread position: | 1-548 |
| Cow position: | chr21:33317584-33317012 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr21:33998736-33998163 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 1-548 |
| Cow position: | chr21:38026157-38026723 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 257 |
| Conread position: | 1-548 |
| Cow position: | chr21:47361385-47360815 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 256 |
| Conread position: | 1-548 |
| Cow position: | chr21:47648122-47648694 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 258 |
| Conread position: | 1-575 |
| Cow position: | chr21:5631201-5630637 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 21 |
| Conread position: | 1-575 |
| Cow position: | chr21:24827335-24826753 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 115 |
| Conread position: | 10-547 |
| Cow position: | chr21:5010681-5010115 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 249 |
| Conread position: | 10-548 |
| Cow position: | chr21:6966679-6966118 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 246 |
| Conread position: | 10-548 |
| Cow position: | chr21:27148760-27148198 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr21:28258464-28259024 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 246 |
| Conread position: | 10-548 |
| Cow position: | chr21:36375781-36376344 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr21:39428194-39428756 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 12-548 |
| Cow position: | chr21:35024174-35024717 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 228 |
| Conread position: | 19-548 |
| Cow position: | chr21:27620693-27620146 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 239 |
| Conread position: | 19-548 |
| Cow position: | chr21:30967141-30966589 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 237 |
| Conread position: | 19-548 |
| Cow position: | chr21:49648164-49647610 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 205 |
| Conread position: | 20-438 |
| Cow position: | chr21:12803264-12802843 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 19, 205 |
| Conread position: | 20-548 |
| Cow position: | chr21:22854723-22855267 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 367 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 14, 239 |
| Conread position: | 22-548 |
| Cow position: | chr21:22943620-22944165 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 31-545 |
| Cow position: | chr21:29254379-29253841 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 359 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 28, 219 |
| Conread position: | 31-550 |
| Cow position: | chr21:24948931-24949467 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 358 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 36, 226 |
| Conread position: | 41-548 |
| Cow position: | chr21:10570111-10570641 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 218 |
| Conread position: | 57-548 |
| Cow position: | chr21:22463033-22463545 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 348 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 144-463 |
| Cow position: | chr21:12325030-12325345 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 162, 91 |
| Conread position: | 153-497 |
| Cow position: | chr21:17060960-17060625 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 153-548 |
| Cow position: | chr21:4733571-4733177 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 128, 81 |
| Conread position: | 153-548 |
| Cow position: | chr21:4813380-4812983 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 82 |
| Conread position: | 153-548 |
| Cow position: | chr21:7048224-7047825 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 81 |
| Conread position: | 153-548 |
| Cow position: | chr21:13162399-13162788 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 278 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 147, 33 |
| Conread position: | 153-548 |
| Cow position: | chr21:35576644-35576250 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 154-548 |
| Cow position: | chr21:25814435-25814041 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 155-548 |
| Cow position: | chr21:27608740-27608346 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 77 |
| Conread position: | 158-548 |
| Cow position: | chr21:6622789-6623168 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 148, 30 |
| Conread position: | 159-548 |
| Cow position: | chr21:39470801-39470410 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 167-528 |
| Cow position: | chr21:30162233-30161877 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 139, 40 |
| Conread position: | 170-548 |
| Cow position: | chr21:1686200-1685831 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 127, 68 |
| Conread position: | 186-548 |
| Cow position: | chr21:45790104-45790463 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 202-548 |
| Cow position: | chr21:30193552-30193206 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 135, 10 |
| Conread position: | 244-547 |
| Cow position: | chr21:21478982-21478674 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 176 |
| Conread position: | 245-542 |
| Cow position: | chr21:11242490-11242780 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 248-497 |
| Cow position: | chr21:23501614-23501356 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 89 |
| Conread position: | 248-548 |
| Cow position: | chr21:33307027-33307320 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 92 |
| Conread position: | 248-548 |
| Cow position: | chr21:38907231-38907536 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 256-548 |
| Cow position: | chr21:25521276-25520976 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 140 |
| Conread position: | 261-548 |
| Cow position: | chr21:4266468-4266180 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 105, 36 |
Show alignments to all cow chromosomes.