Cow genome map
| Conread name: | Ova1-OVRM10122D05 |
| Conread position: | 1-233 |
| Cow position: | chr22:40384515-40384763 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 31, 104 |
| Conread position: | 1-489 |
| Cow position: | chr22:28556303-28556816 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-532 |
| Cow position: | chr22:46612377-46611851 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 347 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 37, 165 |
| Conread position: | 1-543 |
| Cow position: | chr22:46582280-46581719 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 197 |
| Conread position: | 1-545 |
| Cow position: | chr22:10601482-10602033 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 257 |
| Conread position: | 1-548 |
| Cow position: | chr22:558092-557521 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 254 |
| Conread position: | 1-548 |
| Cow position: | chr22:1026620-1027185 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 39 |
| Conread position: | 1-548 |
| Cow position: | chr22:12729042-12728480 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 204 |
| Conread position: | 1-548 |
| Cow position: | chr22:12869845-12869275 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 258 |
| Conread position: | 1-548 |
| Cow position: | chr22:13209008-13209563 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 1-548 |
| Cow position: | chr22:13775116-13775680 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 256 |
| Conread position: | 1-548 |
| Cow position: | chr22:15309354-15308782 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 1-548 |
| Cow position: | chr22:15888427-15888994 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 1-548 |
| Cow position: | chr22:18604196-18603630 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 258 |
| Conread position: | 1-548 |
| Cow position: | chr22:18808619-18808051 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 92 |
| Conread position: | 1-548 |
| Cow position: | chr22:18812300-18811732 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 92 |
| Conread position: | 1-548 |
| Cow position: | chr22:19821797-19822372 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 191 |
| Conread position: | 1-548 |
| Cow position: | chr22:21592036-21592604 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 251 |
| Conread position: | 1-548 |
| Cow position: | chr22:21756014-21756566 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 254 |
| Conread position: | 1-548 |
| Cow position: | chr22:29396714-29397265 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 254 |
| Conread position: | 1-548 |
| Cow position: | chr22:31315153-31315724 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr22:31332262-31331691 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 212 |
| Conread position: | 1-548 |
| Cow position: | chr22:33952341-33951771 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr22:36858926-36858355 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 117 |
| Conread position: | 1-548 |
| Cow position: | chr22:37291230-37290661 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 210 |
| Conread position: | 1-548 |
| Cow position: | chr22:39465931-39465360 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 1-548 |
| Cow position: | chr22:40373014-40373572 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 384 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 68, 123 |
| Conread position: | 1-549 |
| Cow position: | chr22:24818152-24817579 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 252 |
| Conread position: | 1-550 |
| Cow position: | chr22:14823043-14822477 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 380 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 67, 9 |
| Conread position: | 1-550 |
| Cow position: | chr22:36556521-36555963 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-551 |
| Cow position: | chr22:30067856-30067326 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 2-548 |
| Cow position: | chr22:3434353-3433782 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 254 |
| Conread position: | 2-548 |
| Cow position: | chr22:26337930-26338503 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 384 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 2-548 |
| Cow position: | chr22:28784731-28785300 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 255 |
| Conread position: | 3-548 |
| Cow position: | chr22:15878392-15877827 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 376 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 11, 190 |
| Conread position: | 4-424 |
| Cow position: | chr22:7101166-7100725 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 255 |
| Conread position: | 5-548 |
| Cow position: | chr22:29956584-29956010 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 368 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 29, 250 |
| Conread position: | 6-548 |
| Cow position: | chr22:36356685-36357238 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 157 |
| Conread position: | 10-458 |
| Cow position: | chr22:20238214-20237741 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 327 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-497 |
| Cow position: | chr22:10549350-10549862 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 250 |
| Conread position: | 10-497 |
| Cow position: | chr22:44493881-44494394 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 353 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-547 |
| Cow position: | chr22:10577870-10577308 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr22:51136-51693 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 79 |
| Conread position: | 10-548 |
| Cow position: | chr22:539754-540315 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 249 |
| Conread position: | 10-548 |
| Cow position: | chr22:980909-981472 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 249 |
| Conread position: | 10-548 |
| Cow position: | chr22:3275735-3275176 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 244 |
| Conread position: | 10-548 |
| Cow position: | chr22:3806238-3806804 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 250 |
| Conread position: | 10-548 |
| Cow position: | chr22:25941876-25942430 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 366 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 23, 273 |
| Conread position: | 10-548 |
| Cow position: | chr22:30676110-30675546 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 250 |
| Conread position: | 10-548 |
| Cow position: | chr22:41169521-41170075 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 10-548 |
| Cow position: | chr22:43235455-43236018 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr22:44381840-44381277 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr22:45280567-45281130 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 11-548 |
| Cow position: | chr22:13767945-13768486 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 14-548 |
| Cow position: | chr22:15871420-15871966 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 23-539 |
| Cow position: | chr22:532726-533265 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 61 |
| Conread position: | 28-548 |
| Cow position: | chr22:288987-288451 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 360 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 31-548 |
| Cow position: | chr22:39473979-39473437 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 226 |
| Conread position: | 39-476 |
| Cow position: | chr22:36504381-36503929 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 217 |
| Conread position: | 41-475 |
| Cow position: | chr22:44516560-44516113 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 127 |
| Conread position: | 41-548 |
| Cow position: | chr22:6339311-6339835 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 41-548 |
| Cow position: | chr22:42500712-42500185 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 211 |
| Conread position: | 45-527 |
| Cow position: | chr22:3297093-3296593 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 339 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 69-548 |
| Cow position: | chr22:22106732-22107224 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 72-548 |
| Cow position: | chr22:9268887-9269379 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 178 |
| Conread position: | 88-546 |
| Cow position: | chr22:34932364-34931900 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 314 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 62, 134 |
| Conread position: | 90-548 |
| Cow position: | chr22:1267327-1266876 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 310 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 211, 59 |
| Conread position: | 101-366 |
| Cow position: | chr22:10621493-10621757 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 144 |
| Conread position: | 139-416 |
| Cow position: | chr22:11785297-11785019 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 141-548 |
| Cow position: | chr22:28129524-28129934 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 274 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 153-547 |
| Cow position: | chr22:11036287-11036668 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 156, 81 |
| Conread position: | 153-548 |
| Cow position: | chr22:5315026-5315421 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 282 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr22:10907417-10907024 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 81 |
| Conread position: | 153-548 |
| Cow position: | chr22:41946922-41946535 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 154-548 |
| Cow position: | chr22:13248619-13249001 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 20 |
| Conread position: | 156-548 |
| Cow position: | chr22:23867761-23868154 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 150, 75 |
| Conread position: | 159-484 |
| Cow position: | chr22:6722776-6722446 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 159-513 |
| Cow position: | chr22:34596656-34597010 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 147, 72 |
| Conread position: | 159-548 |
| Cow position: | chr22:40829278-40828887 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 160-548 |
| Cow position: | chr22:29185333-29184939 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 146, 83 |
| Conread position: | 248-548 |
| Cow position: | chr22:11754759-11754461 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 58, 199 |
| Conread position: | 248-548 |
| Cow position: | chr22:46586867-46587177 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 58, 269 |
| Conread position: | 255-466 |
| Cow position: | chr22:25201025-25201247 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 256-500 |
| Cow position: | chr22:8900151-8900400 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 70 |
| Conread position: | 265-528 |
| Cow position: | chr22:14102057-14102327 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 41, 235 |
Show alignments to all cow chromosomes.