Cow genome map
| Conread name: | Ova1-OVRM10122D05 |
| Conread position: | 1-302 |
| Cow position: | chr23:1114693-1115004 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 242 |
| Conread position: | 1-474 |
| Cow position: | chr23:25563050-25563540 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 329 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 33, 92 |
| Conread position: | 1-474 |
| Cow position: | chr23:30238868-30239366 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 257 |
| Conread position: | 1-500 |
| Cow position: | chr23:22169493-22170016 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 257 |
| Conread position: | 1-519 |
| Cow position: | chr23:19492162-19492704 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 197 |
| Conread position: | 1-546 |
| Cow position: | chr23:11781393-11781957 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 249 |
| Conread position: | 1-546 |
| Cow position: | chr23:27401744-27402309 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 1-548 |
| Cow position: | chr23:1049271-1048699 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr23:2024479-2023910 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 92 |
| Conread position: | 1-548 |
| Cow position: | chr23:2720058-2720631 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr23:3709007-3709579 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 258 |
| Conread position: | 1-548 |
| Cow position: | chr23:4516145-4516715 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 381 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 1-548 |
| Cow position: | chr23:4891297-4891870 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 256 |
| Conread position: | 1-548 |
| Cow position: | chr23:6222456-6223024 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 384 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 33, 253 |
| Conread position: | 1-548 |
| Cow position: | chr23:11343105-11343671 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 196 |
| Conread position: | 1-548 |
| Cow position: | chr23:14971342-14970777 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 252 |
| Conread position: | 1-548 |
| Cow position: | chr23:26307645-26308209 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 249 |
| Conread position: | 1-548 |
| Cow position: | chr23:29442492-29441922 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 1-553 |
| Cow position: | chr23:7359081-7359640 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 108 |
| Conread position: | 2-392 |
| Cow position: | chr23:3878486-3878099 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 10-425 |
| Cow position: | chr23:943592-944030 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr23:609340-609903 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr23:2792150-2791588 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 243 |
| Conread position: | 10-548 |
| Cow position: | chr23:3285370-3285933 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr23:4266004-4265442 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr23:14960336-14959777 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 182 |
| Conread position: | 10-548 |
| Cow position: | chr23:21773295-21772736 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 14-547 |
| Cow position: | chr23:28084474-28083920 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 19-547 |
| Cow position: | chr23:2321321-2320770 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 239 |
| Conread position: | 19-548 |
| Cow position: | chr23:5396960-5396406 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 239 |
| Conread position: | 19-548 |
| Cow position: | chr23:11713046-11712493 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 238 |
| Conread position: | 23-489 |
| Cow position: | chr23:15504618-15505107 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 344 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 25-548 |
| Cow position: | chr23:41143067-41143615 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 233 |
| Conread position: | 31-518 |
| Cow position: | chr23:40888079-40888585 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 203 |
| Conread position: | 42-378 |
| Cow position: | chr23:8099900-8100244 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 48-548 |
| Cow position: | chr23:26839620-26840137 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 62-548 |
| Cow position: | chr23:22144642-22144135 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 191 |
| Conread position: | 141-548 |
| Cow position: | chr23:30634830-30634420 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 152-548 |
| Cow position: | chr23:2437402-2437010 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 283 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 154, 83 |
| Conread position: | 153-532 |
| Cow position: | chr23:38301956-38301585 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 153-548 |
| Cow position: | chr23:3301634-3302029 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr23:4436411-4436806 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 277 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 153, 82 |
| Conread position: | 153-548 |
| Cow position: | chr23:24516625-24517008 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 82 |
| Conread position: | 153-548 |
| Cow position: | chr23:31703673-31704069 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr23:32008598-32008202 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 275 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 157-548 |
| Cow position: | chr23:4799388-4799003 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 77 |
| Conread position: | 166-547 |
| Cow position: | chr23:11078079-11078451 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 140, 49 |
| Conread position: | 167-548 |
| Cow position: | chr23:14790276-14790658 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 68 |
| Conread position: | 179-548 |
| Cow position: | chr23:36676329-36675968 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 127, 56 |
| Conread position: | 180-548 |
| Cow position: | chr23:2367912-2368283 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 185-425 |
| Cow position: | chr23:8290187-8290427 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 249-548 |
| Cow position: | chr23:30166474-30166174 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 48 |
| Conread position: | 255-497 |
| Cow position: | chr23:5405714-5405965 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 62 |
| Conread position: | 264-548 |
| Cow position: | chr23:11386164-11385872 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 38, 218 |
Show alignments to all cow chromosomes.