Cow genome map
Conread name: | Ova1-OVRM10122D05 |
Conread position: | 1-320 |
Cow position: | chr24:14716135-14715832 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 225 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 32, 59 |
Conread position: | 1-423 |
Cow position: | chr24:23093348-23092911 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 291 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 33, 210 |
Conread position: | 1-423 |
Cow position: | chr24:23096086-23095649 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 291 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 33, 210 |
Conread position: | 1-438 |
Cow position: | chr24:12208477-12208936 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 316 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 33, 220 |
Conread position: | 1-455 |
Cow position: | chr24:14381595-14381116 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 331 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 33, 256 |
Conread position: | 1-538 |
Cow position: | chr24:24249802-24249244 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 256 |
Conread position: | 1-546 |
Cow position: | chr24:14335549-14336132 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 390 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 31, 256 |
Conread position: | 1-547 |
Cow position: | chr24:25648364-25647803 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 253 |
Conread position: | 1-548 |
Cow position: | chr24:8607024-8607596 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 258 |
Conread position: | 1-548 |
Cow position: | chr24:9548962-9549531 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 236 |
Conread position: | 1-548 |
Cow position: | chr24:18267792-18267219 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 253 |
Conread position: | 1-548 |
Cow position: | chr24:19184856-19185421 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 69 |
Conread position: | 1-548 |
Cow position: | chr24:29189983-29190555 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 256 |
Conread position: | 1-548 |
Cow position: | chr24:36721148-36721711 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 77 |
Conread position: | 1-548 |
Cow position: | chr24:40467721-40467146 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 254 |
Conread position: | 2-469 |
Cow position: | chr24:42815044-42815540 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 334 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 24, 12 |
Conread position: | 3-439 |
Cow position: | chr24:6534564-6534143 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 308 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 31, 16 |
Conread position: | 10-397 |
Cow position: | chr24:16473653-16474056 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 284 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 24, 99 |
Conread position: | 10-497 |
Cow position: | chr24:38487110-38487622 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 10-519 |
Cow position: | chr24:7064270-7064804 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 10-548 |
Cow position: | chr24:3850299-3850862 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 249 |
Conread position: | 10-548 |
Cow position: | chr24:6326665-6326104 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 10-548 |
Cow position: | chr24:12698312-12697749 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 10-548 |
Cow position: | chr24:29084961-29084398 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 10-548 |
Cow position: | chr24:30767282-30767832 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 44 |
Conread position: | 10-548 |
Cow position: | chr24:40551329-40551892 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 11-541 |
Cow position: | chr24:19885000-19885532 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 241 |
Conread position: | 11-548 |
Cow position: | chr24:208299-207725 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 247 |
Conread position: | 12-548 |
Cow position: | chr24:6412184-6412745 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 244 |
Conread position: | 16-496 |
Cow position: | chr24:32824373-32823879 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 26 |
Conread position: | 16-548 |
Cow position: | chr24:40460685-40460132 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 377 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 9, 244 |
Conread position: | 17-548 |
Cow position: | chr24:12332994-12332440 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 237 |
Conread position: | 17-548 |
Cow position: | chr24:35824490-35823938 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 239 |
Conread position: | 17-548 |
Cow position: | chr24:40150667-40150121 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 364 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 69, 42 |
Conread position: | 25-548 |
Cow position: | chr24:6543298-6543852 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 378 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 9, 232 |
Conread position: | 25-548 |
Cow position: | chr24:33936656-33937196 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 18 |
Conread position: | 31-548 |
Cow position: | chr24:12578248-12578788 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 225 |
Conread position: | 31-548 |
Cow position: | chr24:36779001-36779538 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 224 |
Conread position: | 39-548 |
Cow position: | chr24:19674574-19675093 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 64 |
Conread position: | 41-548 |
Cow position: | chr24:22974546-22975075 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 215 |
Conread position: | 66-548 |
Cow position: | chr24:44942268-44942762 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 171 |
Conread position: | 77-551 |
Cow position: | chr24:32362069-32361575 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 347 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 7, 176 |
Conread position: | 141-476 |
Cow position: | chr24:17405984-17406317 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 236 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 13, 95 |
Conread position: | 141-546 |
Cow position: | chr24:22820567-22820956 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 282 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 10, 95 |
Conread position: | 153-439 |
Cow position: | chr24:37099688-37099980 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 210 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 27, 82 |
Conread position: | 153-547 |
Cow position: | chr24:12147719-12147321 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 280 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 153, 81 |
Conread position: | 153-548 |
Cow position: | chr24:39501724-39501326 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 273 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 153, 81 |
Conread position: | 154-527 |
Cow position: | chr24:17369066-17368694 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 253 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 152, 80 |
Conread position: | 154-545 |
Cow position: | chr24:16562546-16562160 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 267 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 25, 87 |
Conread position: | 154-548 |
Cow position: | chr24:19643165-19643561 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 81 |
Conread position: | 154-548 |
Cow position: | chr24:43633990-43634383 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 264 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 43, 84 |
Conread position: | 161-548 |
Cow position: | chr24:16559400-16559012 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 22 |
Conread position: | 166-548 |
Cow position: | chr24:41062344-41062720 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 265 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 140, 29 |
Conread position: | 167-548 |
Cow position: | chr24:15296000-15296382 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 67 |
Conread position: | 168-487 |
Cow position: | chr24:14250952-14250633 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 223 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 138, 37 |
Conread position: | 182-544 |
Cow position: | chr24:6238245-6238588 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 244 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 133, 52 |
Conread position: | 199-548 |
Cow position: | chr24:31301622-31301972 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 36 |
Conread position: | 219-548 |
Cow position: | chr24:19198883-19199222 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 229 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 245-548 |
Cow position: | chr24:36478843-36478530 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 206 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 61, 108 |
Conread position: | 248-464 |
Cow position: | chr24:27299714-27299939 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 168 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 59, 191 |
Conread position: | 248-548 |
Cow position: | chr24:13374556-13374247 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 208 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 53, 268 |
Conread position: | 249-539 |
Cow position: | chr24:25465780-25465478 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 208 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 249-547 |
Cow position: | chr24:32363372-32363068 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 207 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 52, 45 |
Conread position: | 255-472 |
Cow position: | chr24:38641130-38641356 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 165 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 51, 61 |
Conread position: | 255-548 |
Cow position: | chr24:14914853-14914564 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 200 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 51, 147 |
Show alignments to all cow chromosomes.