Cow genome map
| Conread name: | Ova1-OVRM10122D05 |
| Conread position: | 1-454 |
| Cow position: | chr28:25563070-25563535 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 329 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 1-463 |
| Cow position: | chr28:12407564-12407078 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 212 |
| Conread position: | 1-502 |
| Cow position: | chr28:10599326-10599835 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 359 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 29, 196 |
| Conread position: | 1-503 |
| Cow position: | chr28:4044878-4045396 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 1-533 |
| Cow position: | chr28:5569022-5569570 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 240 |
| Conread position: | 1-546 |
| Cow position: | chr28:13462613-13463182 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr28:1215181-1214609 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr28:1507525-1508097 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr28:1812310-1811744 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 255 |
| Conread position: | 1-548 |
| Cow position: | chr28:2088218-2088795 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 263 |
| Conread position: | 1-548 |
| Cow position: | chr28:3004863-3004298 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 71 |
| Conread position: | 1-548 |
| Cow position: | chr28:3189384-3188811 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 257 |
| Conread position: | 1-548 |
| Cow position: | chr28:5112069-5111500 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 212 |
| Conread position: | 1-548 |
| Cow position: | chr28:5210771-5211343 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr28:5940134-5940707 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 258 |
| Conread position: | 1-548 |
| Cow position: | chr28:6958882-6959450 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 258 |
| Conread position: | 1-548 |
| Cow position: | chr28:10294453-10295027 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 449 |
| Conread position: | 1-548 |
| Cow position: | chr28:10576353-10575804 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 240 |
| Conread position: | 1-548 |
| Cow position: | chr28:15428320-15428890 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 1-548 |
| Cow position: | chr28:22255544-22254977 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 1-548 |
| Cow position: | chr28:24498694-24499269 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 262 |
| Conread position: | 1-548 |
| Cow position: | chr28:25595553-25596124 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 253 |
| Conread position: | 1-548 |
| Cow position: | chr28:26420351-26419780 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr28:26923982-26923409 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 214 |
| Conread position: | 1-548 |
| Cow position: | chr28:29036995-29036431 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 247 |
| Conread position: | 1-548 |
| Cow position: | chr28:29436131-29435580 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 1-548 |
| Cow position: | chr28:30097527-30098099 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 1-548 |
| Cow position: | chr28:30534412-30533836 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 255 |
| Conread position: | 1-548 |
| Cow position: | chr28:32786773-32786206 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 192 |
| Conread position: | 1-548 |
| Cow position: | chr28:33254972-33255542 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-548 |
| Cow position: | chr28:33639219-33639791 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 229 |
| Conread position: | 2-545 |
| Cow position: | chr28:15352467-15351904 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 256 |
| Conread position: | 3-455 |
| Cow position: | chr28:1384787-1384347 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 3-548 |
| Cow position: | chr28:6231034-6230473 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 232 |
| Conread position: | 5-499 |
| Cow position: | chr28:15675518-15676034 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 341 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 9-354 |
| Cow position: | chr28:17189036-17189388 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 10-496 |
| Cow position: | chr28:11544817-11544311 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 10-548 |
| Cow position: | chr28:483049-482487 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 92 |
| Conread position: | 10-548 |
| Cow position: | chr28:2644377-2644936 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 244 |
| Conread position: | 10-548 |
| Cow position: | chr28:5636709-5637271 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr28:5749048-5748485 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr28:6472779-6472218 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr28:10302498-10303059 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr28:12154501-12155062 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 247 |
| Conread position: | 10-548 |
| Cow position: | chr28:15604273-15604838 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 244 |
| Conread position: | 10-548 |
| Cow position: | chr28:15917865-15917304 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 247 |
| Conread position: | 10-548 |
| Cow position: | chr28:16181034-16181589 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 240 |
| Conread position: | 10-548 |
| Cow position: | chr28:20935755-20935191 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 245 |
| Conread position: | 10-548 |
| Cow position: | chr28:28358125-28357563 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr28:28470681-28471246 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 10-548 |
| Cow position: | chr28:28928491-28929054 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 251 |
| Conread position: | 10-548 |
| Cow position: | chr28:34582582-34583145 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 249 |
| Conread position: | 10-549 |
| Cow position: | chr28:12217629-12217067 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 246 |
| Conread position: | 11-548 |
| Cow position: | chr28:24885520-24886081 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 247 |
| Conread position: | 15-548 |
| Cow position: | chr28:6536131-6535577 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 241 |
| Conread position: | 23-548 |
| Cow position: | chr28:5824506-5825070 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 382 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 10, 235 |
| Conread position: | 24-528 |
| Cow position: | chr28:22553215-22553725 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 348 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 10, 133 |
| Conread position: | 31-548 |
| Cow position: | chr28:7907863-7907324 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 225 |
| Conread position: | 64-548 |
| Cow position: | chr28:13606187-13606653 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 242, 31 |
| Conread position: | 93-527 |
| Cow position: | chr28:3067650-3068090 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 308 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 45, 137 |
| Conread position: | 141-544 |
| Cow position: | chr28:12650041-12650447 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 92 |
| Conread position: | 141-548 |
| Cow position: | chr28:7004838-7005248 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 153-533 |
| Cow position: | chr28:25761722-25762090 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 182, 82 |
| Conread position: | 153-547 |
| Cow position: | chr28:20967844-20967449 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 54 |
| Conread position: | 153-548 |
| Cow position: | chr28:12952034-12952416 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-548 |
| Cow position: | chr28:13880348-13880741 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 153, 77 |
| Conread position: | 153-548 |
| Cow position: | chr28:14665972-14666367 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 153-555 |
| Cow position: | chr28:30966039-30966433 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 163, 81 |
| Conread position: | 154-548 |
| Cow position: | chr28:10279680-10280073 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 152, 80 |
| Conread position: | 159-476 |
| Cow position: | chr28:5337028-5336709 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 147, 79 |
| Conread position: | 160-505 |
| Cow position: | chr28:23394186-23393845 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 160-548 |
| Cow position: | chr28:16041820-16041428 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 146, 74 |
| Conread position: | 179-533 |
| Cow position: | chr28:32267020-32267375 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 121, 54 |
| Conread position: | 189-518 |
| Cow position: | chr28:22153214-22153530 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 117, 46 |
| Conread position: | 248-548 |
| Cow position: | chr28:2663047-2662739 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 58, 267 |
| Conread position: | 248-548 |
| Cow position: | chr28:28184296-28184612 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 250-543 |
| Cow position: | chr28:20630168-20629873 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 56, 205 |
Show alignments to all cow chromosomes.