Cow genome map
Conread name: | Ova1-OVRM10122D05 |
Conread position: | 1-382 |
Cow position: | chr29:5980106-5979702 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 277 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 39, 13 |
Conread position: | 1-453 |
Cow position: | chr29:19656524-19656997 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 202 |
Conread position: | 1-497 |
Cow position: | chr29:15995759-15995241 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 82 |
Conread position: | 1-527 |
Cow position: | chr29:10249056-10248513 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 241 |
Conread position: | 1-548 |
Cow position: | chr29:45840-45270 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 257 |
Conread position: | 1-548 |
Cow position: | chr29:408642-408072 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 255 |
Conread position: | 1-548 |
Cow position: | chr29:2464251-2463680 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 256 |
Conread position: | 1-548 |
Cow position: | chr29:2693066-2693632 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 116 |
Conread position: | 1-548 |
Cow position: | chr29:2838716-2838144 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 255 |
Conread position: | 1-548 |
Cow position: | chr29:5240012-5240586 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 257 |
Conread position: | 1-548 |
Cow position: | chr29:6263383-6262817 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 251 |
Conread position: | 1-548 |
Cow position: | chr29:6934111-6934681 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 257 |
Conread position: | 1-548 |
Cow position: | chr29:8624576-8624004 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 255 |
Conread position: | 1-548 |
Cow position: | chr29:8666303-8666854 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 111 |
Conread position: | 1-548 |
Cow position: | chr29:9080172-9079605 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 5 |
Conread position: | 1-548 |
Cow position: | chr29:10845578-10846148 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 382 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 39, 9 |
Conread position: | 1-548 |
Cow position: | chr29:14208929-14208375 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 248 |
Conread position: | 1-548 |
Cow position: | chr29:16346826-16347393 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 255 |
Conread position: | 1-548 |
Cow position: | chr29:18523809-18523224 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 132 |
Conread position: | 1-548 |
Cow position: | chr29:19620648-19620077 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 206 |
Conread position: | 1-548 |
Cow position: | chr29:20253790-20254358 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 210 |
Conread position: | 1-548 |
Cow position: | chr29:26162216-26161641 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 256 |
Conread position: | 1-548 |
Cow position: | chr29:28697759-28697187 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 256 |
Conread position: | 1-548 |
Cow position: | chr29:34875620-34876170 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 374 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 157, 30 |
Conread position: | 1-548 |
Cow position: | chr29:39077096-39076527 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 253 |
Conread position: | 1-548 |
Cow position: | chr29:45461853-45462425 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 257 |
Conread position: | 1-564 |
Cow position: | chr29:22950250-22949692 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 72 |
Conread position: | 1-567 |
Cow position: | chr29:6215714-6216298 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 76 |
Conread position: | 5-455 |
Cow position: | chr29:3711656-3712116 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 318 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 29, 41 |
Conread position: | 10-396 |
Cow position: | chr29:41184385-41183978 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 282 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 47, 246 |
Conread position: | 10-497 |
Cow position: | chr29:40471294-40471806 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 249 |
Conread position: | 10-529 |
Cow position: | chr29:35299549-35300092 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 10-548 |
Cow position: | chr29:608004-607445 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 244 |
Conread position: | 10-548 |
Cow position: | chr29:19525660-19525098 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 10-548 |
Cow position: | chr29:19890202-19890760 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 152 |
Conread position: | 10-548 |
Cow position: | chr29:21430228-21429668 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 10-548 |
Cow position: | chr29:31764671-31765232 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 246 |
Conread position: | 10-548 |
Cow position: | chr29:32514954-32515520 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 216 |
Conread position: | 10-548 |
Cow position: | chr29:32557116-32556552 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 249 |
Conread position: | 10-548 |
Cow position: | chr29:42256349-42255786 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 10-548 |
Cow position: | chr29:45207140-45207702 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 253 |
Conread position: | 10-550 |
Cow position: | chr29:40619220-40618656 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 22-548 |
Cow position: | chr29:10453172-10452624 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 232 |
Conread position: | 23-548 |
Cow position: | chr29:2429750-2430281 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 370 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 11, 236 |
Conread position: | 36-426 |
Cow position: | chr29:34807226-34807607 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 263 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 265, 26 |
Conread position: | 45-474 |
Cow position: | chr29:5960502-5960951 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 313 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 23, 209 |
Conread position: | 57-463 |
Cow position: | chr29:13612171-13611738 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 298 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 114-550 |
Cow position: | chr29:34538484-34538055 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 290 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 37, 25 |
Conread position: | 131-548 |
Cow position: | chr29:12797361-12797774 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 247 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 175, 106 |
Conread position: | 141-483 |
Cow position: | chr29:35002875-35002530 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 243 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 13, 91 |
Conread position: | 141-548 |
Cow position: | chr29:42806773-42807183 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 95 |
Conread position: | 153-529 |
Cow position: | chr29:13647086-13646730 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 257 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 152, 25 |
Conread position: | 153-548 |
Cow position: | chr29:10820919-10820523 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 80 |
Conread position: | 153-548 |
Cow position: | chr29:16064507-16064902 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 81 |
Conread position: | 153-548 |
Cow position: | chr29:29600382-29599990 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 81 |
Conread position: | 153-548 |
Cow position: | chr29:34524526-34524130 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 81 |
Conread position: | 154-438 |
Cow position: | chr29:16596417-16596696 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 207 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 152, 80 |
Conread position: | 156-548 |
Cow position: | chr29:35264716-35265109 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 78 |
Conread position: | 161-475 |
Cow position: | chr29:13044836-13044529 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 221 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 145, 47 |
Conread position: | 170-549 |
Cow position: | chr29:43326326-43326707 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 18 |
Conread position: | 248-533 |
Cow position: | chr29:8511378-8511666 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 211 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 28, 33 |
Conread position: | 249-548 |
Cow position: | chr29:19956210-19956509 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 220 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 57, 73 |
Conread position: | 255-550 |
Cow position: | chr29:18361709-18361402 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 215 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 266-548 |
Cow position: | chr29:4217217-4217505 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 209 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 40, 159 |
Show alignments to all cow chromosomes.