Cow genome map

Conread name: Ova1-OVRM10122D05

Conread position: 1-382
Cow position: chr29:5980106-5979702 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 277
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 13

Conread position: 1-453
Cow position: chr29:19656524-19656997 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 202

Conread position: 1-497
Cow position: chr29:15995759-15995241 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 82

Conread position: 1-527
Cow position: chr29:10249056-10248513 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 241

Conread position: 1-548
Cow position: chr29:45840-45270 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position: chr29:408642-408072 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr29:2464251-2463680 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 256

Conread position: 1-548
Cow position: chr29:2693066-2693632 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 116

Conread position: 1-548
Cow position: chr29:2838716-2838144 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr29:5240012-5240586 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position: chr29:6263383-6262817 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 251

Conread position: 1-548
Cow position: chr29:6934111-6934681 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position: chr29:8624576-8624004 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr29:8666303-8666854 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 111

Conread position: 1-548
Cow position: chr29:9080172-9079605 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 5

Conread position: 1-548
Cow position: chr29:10845578-10846148 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 382
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 39, 9

Conread position: 1-548
Cow position: chr29:14208929-14208375 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 248

Conread position: 1-548
Cow position: chr29:16346826-16347393 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 255

Conread position: 1-548
Cow position: chr29:18523809-18523224 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 132

Conread position: 1-548
Cow position: chr29:19620648-19620077 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 206

Conread position: 1-548
Cow position: chr29:20253790-20254358 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 210

Conread position: 1-548
Cow position: chr29:26162216-26161641 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 256

Conread position: 1-548
Cow position: chr29:28697759-28697187 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 256

Conread position: 1-548
Cow position: chr29:34875620-34876170 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 374
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 157, 30

Conread position: 1-548
Cow position: chr29:39077096-39076527 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 253

Conread position: 1-548
Cow position: chr29:45461853-45462425 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 257

Conread position: 1-564
Cow position: chr29:22950250-22949692 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 1-567
Cow position: chr29:6215714-6216298 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 76

Conread position: 5-455
Cow position: chr29:3711656-3712116 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 318
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 41

Conread position: 10-396
Cow position: chr29:41184385-41183978 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 282
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 47, 246

Conread position: 10-497
Cow position: chr29:40471294-40471806 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-529
Cow position: chr29:35299549-35300092 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr29:608004-607445 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 244

Conread position: 10-548
Cow position: chr29:19525660-19525098 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr29:19890202-19890760 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 152

Conread position: 10-548
Cow position: chr29:21430228-21429668 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr29:31764671-31765232 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 246

Conread position: 10-548
Cow position: chr29:32514954-32515520 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 216

Conread position: 10-548
Cow position: chr29:32557116-32556552 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position: chr29:42256349-42255786 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr29:45207140-45207702 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 253

Conread position: 10-550
Cow position: chr29:40619220-40618656 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 22-548
Cow position: chr29:10453172-10452624 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 232

Conread position: 23-548
Cow position: chr29:2429750-2430281 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 370
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 236

Conread position: 36-426
Cow position: chr29:34807226-34807607 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 263
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 265, 26

Conread position: 45-474
Cow position: chr29:5960502-5960951 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 313
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 209

Conread position: 57-463
Cow position: chr29:13612171-13611738 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 298
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 23

Conread position: 114-550
Cow position: chr29:34538484-34538055 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 290
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 37, 25

Conread position: 131-548
Cow position: chr29:12797361-12797774 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 247
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 175, 106

Conread position: 141-483
Cow position: chr29:35002875-35002530 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 91

Conread position: 141-548
Cow position: chr29:42806773-42807183 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 95

Conread position: 153-529
Cow position: chr29:13647086-13646730 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 257
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 152, 25

Conread position: 153-548
Cow position: chr29:10820919-10820523 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 80

Conread position: 153-548
Cow position: chr29:16064507-16064902 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 153-548
Cow position: chr29:29600382-29599990 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 153-548
Cow position: chr29:34524526-34524130 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 154-438
Cow position: chr29:16596417-16596696 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 152, 80

Conread position: 156-548
Cow position: chr29:35264716-35265109 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 78

Conread position: 161-475
Cow position: chr29:13044836-13044529 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 145, 47

Conread position: 170-549
Cow position: chr29:43326326-43326707 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 18

Conread position: 248-533
Cow position: chr29:8511378-8511666 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 33

Conread position: 249-548
Cow position: chr29:19956210-19956509 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 57, 73

Conread position: 255-550
Cow position: chr29:18361709-18361402 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 54, 0

Conread position: 266-548
Cow position: chr29:4217217-4217505 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 40, 159

Show alignments to all cow chromosomes.