Cow genome map

Conread name: Ova1-OVRM10122D05

Conread position: 1-431
Cow position: chr4:52961353-52960903 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 321
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 33, 83

Conread position: 1-472
Cow position: chr4:33646224-33645759 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 145

Conread position: 1-486
Cow position: chr4:43028777-43028278 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 332
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 33, 82

Conread position: 1-528
Cow position: chr4:61951824-61952384 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 377
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 33, 260

Conread position: 1-532
Cow position: chr4:16640951-16641490 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-539
Cow position: chr4:38931703-38932260 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 381
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 107

Conread position: 1-545
Cow position: chr4:5048188-5047624 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 31

Conread position: 1-546
Cow position: chr4:45654828-45654263 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 1-548
Cow position: chr4:33747-33181 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 385
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 253

Conread position: 1-548
Cow position: chr4:358223-358796 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 259

Conread position: 1-548
Cow position: chr4:1047912-1047353 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr4:3449135-3449707 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 255

Conread position: 1-548
Cow position: chr4:4378733-4379295 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 253

Conread position: 1-548
Cow position: chr4:5913701-5914238 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 139

Conread position: 1-548
Cow position: chr4:6488030-6487456 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 257

Conread position: 1-548
Cow position: chr4:7215431-7214866 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 251

Conread position: 1-548
Cow position: chr4:9356577-9357149 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position: chr4:10045434-10044856 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 261

Conread position: 1-548
Cow position: chr4:10883977-10884551 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position: chr4:12238876-12238323 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 75

Conread position: 1-548
Cow position: chr4:16362544-16363111 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 96

Conread position: 1-548
Cow position: chr4:17776420-17775857 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 1-548
Cow position: chr4:17876308-17876868 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr4:18100568-18099994 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 22

Conread position: 1-548
Cow position: chr4:23305000-23304430 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 253

Conread position: 1-548
Cow position: chr4:25597147-25596574 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr4:29531118-29530546 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 49

Conread position: 1-548
Cow position: chr4:31562900-31562320 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 265

Conread position: 1-548
Cow position: chr4:34176650-34176073 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 253

Conread position: 1-548
Cow position: chr4:36026931-36026359 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr4:36898716-36899288 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr4:37702610-37703166 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 148

Conread position: 1-548
Cow position: chr4:43317308-43316738 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 211

Conread position: 1-548
Cow position: chr4:44594026-44593481 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 58

Conread position: 1-548
Cow position: chr4:46712257-46711695 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr4:61241621-61242194 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 258

Conread position: 1-548
Cow position: chr4:67382626-67383192 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-570
Cow position: chr4:34385218-34384668 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 373
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 126, 47

Conread position: 2-548
Cow position: chr4:2350376-2349802 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 254

Conread position: 2-548
Cow position: chr4:33495901-33496473 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 256

Conread position: 2-548
Cow position: chr4:43897357-43896796 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 23

Conread position: 2-548
Cow position: chr4:67601320-67600757 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 367
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 251

Conread position: 4-529
Cow position: chr4:11105338-11104789 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 359
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 255

Conread position: 4-548
Cow position: chr4:1188009-1187442 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 5-478
Cow position: chr4:11391140-11390650 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 253

Conread position: 10-440
Cow position: chr4:45269063-45268611 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 247

Conread position: 10-474
Cow position: chr4:8934966-8935452 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 327
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 245

Conread position: 10-502
Cow position: chr4:30473782-30474300 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-546
Cow position: chr4:67393589-67394136 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 61

Conread position: 10-548
Cow position: chr4:3128170-3128726 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 241

Conread position: 10-548
Cow position: chr4:6863883-6863320 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr4:18336598-18336039 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 240

Conread position: 10-548
Cow position: chr4:21844172-21843609 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 250

Conread position: 10-548
Cow position: chr4:27177176-27177739 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 246

Conread position: 10-548
Cow position: chr4:29605126-29604563 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr4:32214524-32215065 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 120

Conread position: 10-548
Cow position: chr4:33070492-33069936 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 196

Conread position: 10-548
Cow position: chr4:41961246-41961807 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 247

Conread position: 10-548
Cow position: chr4:44778845-44778282 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 11-548
Cow position: chr4:33021283-33020721 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 251

Conread position: 15-493
Cow position: chr4:13464168-13464669 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 241

Conread position: 15-547
Cow position: chr4:9005377-9004821 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 241

Conread position: 15-548
Cow position: chr4:4418405-4418957 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 241

Conread position: 15-548
Cow position: chr4:41957118-41957672 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 240

Conread position: 17-548
Cow position: chr4:64799469-64800023 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 379
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 17, 248

Conread position: 20-548
Cow position: chr4:14794818-14795346 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 363
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 20

Conread position: 23-465
Cow position: chr4:5487031-5486561 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 238

Conread position: 36-548
Cow position: chr4:67681614-67681066 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 507

Conread position: 38-546
Cow position: chr4:22074685-22074167 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 344
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 209

Conread position: 40-321
Cow position: chr4:47749705-47749986 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 37

Conread position: 46-541
Cow position: chr4:58882992-58882481 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 348
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 44

Conread position: 64-542
Cow position: chr4:1240010-1239513 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 342
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 72, 171

Conread position: 84-545
Cow position: chr4:46198827-46198362 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 108

Conread position: 132-548
Cow position: chr4:15010176-15009758 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 272
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 106

Conread position: 141-540
Cow position: chr4:54758732-54758337 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 96

Conread position: 141-548
Cow position: chr4:57987245-57987655 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 94

Conread position: 153-404
Cow position: chr4:9648636-9648885 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 83

Conread position: 153-540
Cow position: chr4:44733141-44733529 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 272
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 153, 82

Conread position: 153-548
Cow position: chr4:27336728-27337123 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 81

Conread position: 154-466
Cow position: chr4:20184018-20184324 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 153, 19

Conread position: 154-546
Cow position: chr4:6445031-6444655 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 265
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 173, 80

Conread position: 154-548
Cow position: chr4:54189307-54189681 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 262
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 152, 80

Conread position: 155-415
Cow position: chr4:20642641-20642885 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 151, 13

Conread position: 159-548
Cow position: chr4:58291262-58291652 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 75

Conread position: 170-548
Cow position: chr4:19206232-19206606 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 131, 34

Conread position: 179-548
Cow position: chr4:49697573-49697195 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 262
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 126, 56

Conread position: 189-548
Cow position: chr4:45196708-45197062 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 117, 45

Conread position: 217-544
Cow position: chr4:61984794-61984460 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 225

Conread position: 248-545
Cow position: chr4:41190559-41190255 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 67, 208

Conread position: 248-548
Cow position: chr4:10823265-10822958 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 94

Show alignments to all cow chromosomes.