Cow genome map

Conread name: Ova1-OVRM10122D05

Conread position: 1-386
Cow position: chr7:66235165-66234768 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 288
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 108

Conread position: 1-394
Cow position: chr7:30116566-30116155 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 286
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 33, 16

Conread position: 1-497
Cow position: chr7:18425391-18424878 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 19

Conread position: 1-519
Cow position: chr7:14136180-14135637 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-532
Cow position: chr7:27458028-27457486 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 187

Conread position: 1-541
Cow position: chr7:21314560-21315111 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 372
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 254

Conread position: 1-545
Cow position: chr7:20828701-20829262 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 35

Conread position: 1-546
Cow position: chr7:42302751-42302192 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 377
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 54

Conread position: 1-546
Cow position: chr7:47191071-47190503 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 258

Conread position: 1-547
Cow position: chr7:21241078-21240521 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 377
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 31, 69

Conread position: 1-547
Cow position: chr7:34667576-34668129 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 46

Conread position: 1-548
Cow position: chr7:99892-99334 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 49

Conread position: 1-548
Cow position: chr7:195232-194662 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 253

Conread position: 1-548
Cow position: chr7:443588-443018 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 255

Conread position: 1-548
Cow position: chr7:997862-998435 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 222

Conread position: 1-548
Cow position: chr7:1368025-1367453 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr7:1556074-1556641 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 378
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 197

Conread position: 1-548
Cow position: chr7:5251470-5250924 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 133

Conread position: 1-548
Cow position: chr7:5305317-5304744 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 256

Conread position: 1-548
Cow position: chr7:8742618-8742035 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 398
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 88

Conread position: 1-548
Cow position: chr7:10428751-10428178 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 256

Conread position: 1-548
Cow position: chr7:11420910-11420338 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr7:13821002-13821565 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 41

Conread position: 1-548
Cow position: chr7:19467829-19467255 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 262

Conread position: 1-548
Cow position: chr7:21125000-21124428 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr7:21989305-21989876 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr7:22760288-22760861 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 383
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 33, 137

Conread position: 1-548
Cow position: chr7:29473114-29473684 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 258

Conread position: 1-548
Cow position: chr7:34488586-34489148 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 133

Conread position: 1-548
Cow position: chr7:38399522-38400092 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 250

Conread position: 1-548
Cow position: chr7:43395346-43394776 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 31

Conread position: 1-548
Cow position: chr7:45613802-45613234 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 255

Conread position: 1-548
Cow position: chr7:46235506-46236064 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 12

Conread position: 1-548
Cow position: chr7:53404070-53404641 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 115

Conread position: 1-548
Cow position: chr7:55535249-55534678 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 254

Conread position: 1-548
Cow position: chr7:59773987-59774553 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 250

Conread position: 1-548
Cow position: chr7:60727786-60727212 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr7:65957881-65957318 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 376
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 33, 123

Conread position: 1-548
Cow position: chr7:67671910-67671354 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 1-548
Cow position: chr7:67802001-67802570 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 241

Conread position: 1-548
Cow position: chr7:69017932-69018496 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 383
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 33, 257

Conread position: 1-551
Cow position: chr7:20937948-20938516 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 372
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 55

Conread position: 3-548
Cow position: chr7:13531233-13530664 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 99

Conread position: 3-548
Cow position: chr7:46748659-46749227 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 253

Conread position: 4-548
Cow position: chr7:54510520-54509970 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 10

Conread position: 5-464
Cow position: chr7:24742396-24741943 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 129

Conread position: 7-548
Cow position: chr7:30305512-30306058 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 88

Conread position: 7-548
Cow position: chr7:48813799-48814360 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 239

Conread position: 10-472
Cow position: chr7:19181707-19182176 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 126

Conread position: 10-497
Cow position: chr7:5437423-5436917 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 78

Conread position: 10-497
Cow position: chr7:7277088-7277600 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-499
Cow position: chr7:60758515-60758001 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 248

Conread position: 10-548
Cow position: chr7:13233-12670 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr7:1331735-1331172 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr7:6626695-6626132 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position: chr7:6666179-6666742 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr7:19097620-19097054 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 250

Conread position: 10-548
Cow position: chr7:21424686-21424126 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 221

Conread position: 10-548
Cow position: chr7:25442451-25443014 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 251

Conread position: 10-548
Cow position: chr7:26927492-26926935 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 244

Conread position: 10-548
Cow position: chr7:27099591-27099029 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr7:27571927-27572487 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 105

Conread position: 10-548
Cow position: chr7:37165541-37166103 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr7:45946176-45945613 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 239

Conread position: 10-548
Cow position: chr7:49603890-49603329 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr7:60465399-60465961 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 241

Conread position: 10-548
Cow position: chr7:64012104-64012667 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 249

Conread position: 10-548
Cow position: chr7:65813517-65814080 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 11-548
Cow position: chr7:23140235-23140794 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 243

Conread position: 19-396
Cow position: chr7:61138467-61138073 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 270
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 234

Conread position: 20-548
Cow position: chr7:6629079-6628526 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 239

Conread position: 22-548
Cow position: chr7:66907937-66908485 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 232

Conread position: 28-547
Cow position: chr7:39324283-39324809 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 195

Conread position: 32-548
Cow position: chr7:11461433-11460895 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 224

Conread position: 39-469
Cow position: chr7:62952057-62952508 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 214

Conread position: 41-548
Cow position: chr7:44591351-44590829 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 344
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 46

Conread position: 42-548
Cow position: chr7:265877-266398 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 195

Conread position: 47-489
Cow position: chr7:61623969-61623507 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 297
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 155

Conread position: 47-548
Cow position: chr7:982875-982353 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 209

Conread position: 64-490
Cow position: chr7:42594823-42594382 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 52

Conread position: 96-548
Cow position: chr7:56888218-56887769 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 136-548
Cow position: chr7:47045100-47045495 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 277
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 100

Conread position: 141-548
Cow position: chr7:42430470-42430878 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 95

Conread position: 141-548
Cow position: chr7:53069962-53070369 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 93

Conread position: 147-507
Cow position: chr7:50880907-50881262 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 159, 87

Conread position: 147-548
Cow position: chr7:57910212-57910607 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 272
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 159, 87

Conread position: 153-399
Cow position: chr7:38188174-38188419 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 153, 81

Conread position: 153-492
Cow position: chr7:735891-735553 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 54

Conread position: 153-499
Cow position: chr7:62990573-62990923 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 29, 81

Conread position: 153-539
Cow position: chr7:23463553-23463173 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 153, 17

Conread position: 153-548
Cow position: chr7:5660705-5661098 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 265
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 153, 76

Conread position: 153-548
Cow position: chr7:34818904-34819300 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 153-548
Cow position: chr7:35920466-35920070 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 153-548
Cow position: chr7:49826245-49825849 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 153-548
Cow position: chr7:49845431-49845037 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 270
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 153, 82

Conread position: 154-502
Cow position: chr7:51193554-51193897 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 152, 80

Conread position: 154-526
Cow position: chr7:62393326-62393701 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 147, 81

Conread position: 154-546
Cow position: chr7:467731-467346 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 152, 78

Conread position: 154-548
Cow position: chr7:6800255-6799863 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 80

Conread position: 155-548
Cow position: chr7:50960929-50961318 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 79

Conread position: 178-545
Cow position: chr7:50554607-50554988 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 257
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 62

Conread position: 184-504
Cow position: chr7:35867543-35867227 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 51

Conread position: 190-529
Cow position: chr7:64199894-64199565 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 116, 47

Conread position: 195-498
Cow position: chr7:58899851-58900153 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 111, 39

Conread position: 248-446
Cow position: chr7:26464730-26464937 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 71

Conread position: 255-500
Cow position: chr7:54120217-54120463 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 107, 8

Conread position: 256-548
Cow position: chr7:49784779-49784475 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.