Cow genome map

Conread name: Ova1-OVRM10122D05

Conread position: 1-289
Cow position: chr8:11136688-11136982 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 200

Conread position: 1-295
Cow position: chr8:42541587-42541285 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 12

Conread position: 1-299
Cow position: chr8:48790034-48790342 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 23, 241

Conread position: 1-388
Cow position: chr8:53434074-53434481 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 104

Conread position: 1-424
Cow position: chr8:12070752-12071186 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 301
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 32, 251

Conread position: 1-460
Cow position: chr8:18055553-18056041 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 240

Conread position: 1-469
Cow position: chr8:3333887-3334380 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-497
Cow position: chr8:11592006-11592507 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 343
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 33, 133

Conread position: 1-497
Cow position: chr8:24192113-24192633 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 256

Conread position: 1-519
Cow position: chr8:27154275-27153735 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 359
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 101

Conread position: 1-527
Cow position: chr8:24230286-24230831 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 102

Conread position: 1-543
Cow position: chr8:18291173-18290610 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 254

Conread position: 1-548
Cow position: chr8:2167662-2167099 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 246

Conread position: 1-548
Cow position: chr8:4273126-4273700 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 255

Conread position: 1-548
Cow position: chr8:14589019-14588446 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 259

Conread position: 1-548
Cow position: chr8:14926032-14925460 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr8:17313892-17314464 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 256

Conread position: 1-548
Cow position: chr8:21118914-21118348 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 192

Conread position: 1-548
Cow position: chr8:23773491-23774060 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 248

Conread position: 1-548
Cow position: chr8:25413475-25414037 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 118

Conread position: 1-548
Cow position: chr8:25773783-25773215 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position: chr8:29010498-29011069 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 255

Conread position: 1-548
Cow position: chr8:30417486-30418052 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 243

Conread position: 1-548
Cow position: chr8:30484383-30483818 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 237

Conread position: 1-548
Cow position: chr8:32649550-32650112 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 374
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 32, 249

Conread position: 1-548
Cow position: chr8:32927466-32926911 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 191

Conread position: 1-548
Cow position: chr8:33591214-33591785 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 254

Conread position: 1-548
Cow position: chr8:33899063-33898493 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 1-548
Cow position: chr8:35472153-35472728 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 258

Conread position: 1-548
Cow position: chr8:46481434-46480854 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 385
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 262

Conread position: 1-548
Cow position: chr8:47655940-47655377 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 375
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 31, 256

Conread position: 1-548
Cow position: chr8:50284363-50283792 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position: chr8:51062274-51061718 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 93

Conread position: 1-548
Cow position: chr8:51697595-51697038 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 377
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 16

Conread position: 1-548
Cow position: chr8:53005024-53004469 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 100

Conread position: 2-548
Cow position: chr8:8468135-8468700 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 247

Conread position: 2-548
Cow position: chr8:21233896-21234435 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 83

Conread position: 2-548
Cow position: chr8:45069795-45070356 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 249

Conread position: 3-438
Cow position: chr8:42486765-42487223 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 317
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 246

Conread position: 3-548
Cow position: chr8:38562583-38562019 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 256

Conread position: 4-536
Cow position: chr8:44868281-44868824 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 96

Conread position: 5-547
Cow position: chr8:47359870-47359339 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 26

Conread position: 5-548
Cow position: chr8:4689257-4689826 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 252

Conread position: 5-548
Cow position: chr8:39193050-39192484 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 189

Conread position: 7-320
Cow position: chr8:55341980-55342293 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 88

Conread position: 7-548
Cow position: chr8:9994331-9994873 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 9-473
Cow position: chr8:28882214-28882707 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 333
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 7, 15

Conread position: 10-437
Cow position: chr8:6465742-6466188 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 310
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 247

Conread position: 10-548
Cow position: chr8:1569986-1570549 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position: chr8:6203423-6202861 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position: chr8:8553854-8553293 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr8:9738385-9738947 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr8:12446543-12445972 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 262

Conread position: 10-548
Cow position: chr8:14630364-14629801 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr8:21091468-21090905 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position: chr8:32629147-32628585 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 248

Conread position: 10-548
Cow position: chr8:37933176-37933739 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position: chr8:46950541-46951103 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 250

Conread position: 10-548
Cow position: chr8:50431278-50430716 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position: chr8:51604020-51603459 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 239

Conread position: 10-549
Cow position: chr8:4746437-4745873 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 248

Conread position: 12-548
Cow position: chr8:60066744-60067304 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 246

Conread position: 14-548
Cow position: chr8:14257955-14258509 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 243

Conread position: 15-548
Cow position: chr8:22569426-22568869 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 242

Conread position: 15-548
Cow position: chr8:53837812-53838358 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 231

Conread position: 17-548
Cow position: chr8:45792846-45792303 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 33

Conread position: 19-397
Cow position: chr8:51905734-51905341 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 284
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 229

Conread position: 20-548
Cow position: chr8:58855556-58856101 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 219

Conread position: 25-484
Cow position: chr8:3854156-3853668 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 231

Conread position: 28-540
Cow position: chr8:42745906-42745372 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 348
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 203

Conread position: 31-466
Cow position: chr8:16025375-16024915 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 313
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 37, 84

Conread position: 31-533
Cow position: chr8:51163400-51163915 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 346
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 225

Conread position: 32-548
Cow position: chr8:12056445-12056992 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 222

Conread position: 39-499
Cow position: chr8:2824405-2823924 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 215

Conread position: 44-548
Cow position: chr8:33854739-33855242 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 363
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 17, 148

Conread position: 53-548
Cow position: chr8:8017164-8016640 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 204

Conread position: 148-548
Cow position: chr8:22280883-22281279 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 271
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 59

Conread position: 152-548
Cow position: chr8:29918955-29918544 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 276
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 90, 174

Conread position: 153-452
Cow position: chr8:13503657-13503950 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 153, 15

Conread position: 153-548
Cow position: chr8:12150335-12150730 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 60

Conread position: 153-548
Cow position: chr8:19360634-19361020 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 85

Conread position: 153-548
Cow position: chr8:21218767-21219150 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 44

Conread position: 153-548
Cow position: chr8:32315600-32315202 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 81

Conread position: 153-548
Cow position: chr8:39740652-39740264 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 81

Conread position: 153-549
Cow position: chr8:19823533-19823145 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 15

Conread position: 154-548
Cow position: chr8:12286966-12287361 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 277
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 151, 80

Conread position: 154-548
Cow position: chr8:35212570-35212175 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 275
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 152, 80

Conread position: 155-548
Cow position: chr8:31977375-31976981 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 79

Conread position: 155-548
Cow position: chr8:47467348-47466955 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 151, 80

Conread position: 156-493
Cow position: chr8:57280608-57280943 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 222
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 78

Conread position: 158-546
Cow position: chr8:31252392-31252778 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 270
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 178, 18

Conread position: 159-548
Cow position: chr8:7427866-7427493 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 234
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 147, 75

Conread position: 159-548
Cow position: chr8:46654643-46655031 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 76

Conread position: 159-548
Cow position: chr8:46961043-46961433 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 75

Conread position: 160-548
Cow position: chr8:24903893-24904274 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 72

Conread position: 165-548
Cow position: chr8:24869157-24868785 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 141, 69

Conread position: 178-454
Cow position: chr8:18208883-18208613 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 184, 56

Conread position: 205-546
Cow position: chr8:55445329-55444987 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 30

Conread position: 209-476
Cow position: chr8:13936248-13935979 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 97, 26

Conread position: 248-548
Cow position: chr8:8279608-8279297 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 176, 58

Conread position: 249-548
Cow position: chr8:26496622-26496928 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 57, 129

Conread position: 250-546
Cow position: chr8:56255714-56256020 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 40

Show alignments to all cow chromosomes.