Cow genome map

Conread name: Ova1-OVRM10122D05

Conread position: 1-289
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 200

Conread position: 1-295
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 12

Conread position: 1-299
Cow position:
Alignm length: 311
Alignm identity: 206
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 23, 241

Conread position: 1-388
Cow position:
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 104

Conread position: 1-424
Cow position:
Alignm length: 447
Alignm identity: 301
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 32, 251

Conread position: 1-460
Cow position:
Alignm length: 500
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 240

Conread position: 1-469
Cow position:
Alignm length: 503
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-497
Cow position:
Alignm length: 518
Alignm identity: 343
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 33, 133

Conread position: 1-497
Cow position:
Alignm length: 530
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 256

Conread position: 1-519
Cow position:
Alignm length: 553
Alignm identity: 359
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 101

Conread position: 1-527
Cow position:
Alignm length: 561
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 102

Conread position: 1-543
Cow position:
Alignm length: 576
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 254

Conread position: 1-548
Cow position:
Alignm length: 573
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 246

Conread position: 1-548
Cow position:
Alignm length: 586
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 255

Conread position: 1-548
Cow position:
Alignm length: 585
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 259

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 256

Conread position: 1-548
Cow position:
Alignm length: 579
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 192

Conread position: 1-548
Cow position:
Alignm length: 581
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 248

Conread position: 1-548
Cow position:
Alignm length: 575
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 118

Conread position: 1-548
Cow position:
Alignm length: 582
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 255

Conread position: 1-548
Cow position:
Alignm length: 578
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 243

Conread position: 1-548
Cow position:
Alignm length: 572
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 237

Conread position: 1-548
Cow position:
Alignm length: 574
Alignm identity: 374
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 32, 249

Conread position: 1-548
Cow position:
Alignm length: 582
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 191

Conread position: 1-548
Cow position:
Alignm length: 582
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 254

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 1-548
Cow position:
Alignm length: 586
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 258

Conread position: 1-548
Cow position:
Alignm length: 593
Alignm identity: 385
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 262

Conread position: 1-548
Cow position:
Alignm length: 576
Alignm identity: 375
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 31, 256

Conread position: 1-548
Cow position:
Alignm length: 582
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position:
Alignm length: 571
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 93

Conread position: 1-548
Cow position:
Alignm length: 577
Alignm identity: 377
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 16

Conread position: 1-548
Cow position:
Alignm length: 567
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 100

Conread position: 2-548
Cow position:
Alignm length: 578
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 247

Conread position: 2-548
Cow position:
Alignm length: 566
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 83

Conread position: 2-548
Cow position:
Alignm length: 574
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 249

Conread position: 3-438
Cow position:
Alignm length: 468
Alignm identity: 317
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 246

Conread position: 3-548
Cow position:
Alignm length: 580
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 256

Conread position: 4-536
Cow position:
Alignm length: 555
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 96

Conread position: 5-547
Cow position:
Alignm length: 565
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 26

Conread position: 5-548
Cow position:
Alignm length: 580
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 252

Conread position: 5-548
Cow position:
Alignm length: 581
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 189

Conread position: 7-320
Cow position:
Alignm length: 327
Alignm identity: 226
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 88

Conread position: 7-548
Cow position:
Alignm length: 569
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 9-473
Cow position:
Alignm length: 505
Alignm identity: 333
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 7, 15

Conread position: 10-437
Cow position:
Alignm length: 461
Alignm identity: 310
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 247

Conread position: 10-548
Cow position:
Alignm length: 573
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position:
Alignm length: 571
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 579
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 262

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 575
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 248

Conread position: 10-548
Cow position:
Alignm length: 573
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position:
Alignm length: 575
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 250

Conread position: 10-548
Cow position:
Alignm length: 575
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 239

Conread position: 10-549
Cow position:
Alignm length: 579
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 248

Conread position: 12-548
Cow position:
Alignm length: 574
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 246

Conread position: 14-548
Cow position:
Alignm length: 566
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 243

Conread position: 15-548
Cow position:
Alignm length: 568
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 242

Conread position: 15-548
Cow position:
Alignm length: 557
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 231

Conread position: 17-548
Cow position:
Alignm length: 566
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 33

Conread position: 19-397
Cow position:
Alignm length: 404
Alignm identity: 284
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 229

Conread position: 20-548
Cow position:
Alignm length: 561
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 219

Conread position: 25-484
Cow position:
Alignm length: 498
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 231

Conread position: 28-540
Cow position:
Alignm length: 545
Alignm identity: 348
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 203

Conread position: 31-466
Cow position:
Alignm length: 469
Alignm identity: 313
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 37, 84

Conread position: 31-533
Cow position:
Alignm length: 533
Alignm identity: 346
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 225

Conread position: 32-548
Cow position:
Alignm length: 557
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 222

Conread position: 39-499
Cow position:
Alignm length: 491
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 215

Conread position: 44-548
Cow position:
Alignm length: 534
Alignm identity: 363
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 17, 148

Conread position: 53-548
Cow position:
Alignm length: 534
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 204

Conread position: 148-548
Cow position:
Alignm length: 412
Alignm identity: 271
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 59

Conread position: 152-548
Cow position:
Alignm length: 413
Alignm identity: 276
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 90, 174

Conread position: 153-452
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 153, 15

Conread position: 153-548
Cow position:
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 60

Conread position: 153-548
Cow position:
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 85

Conread position: 153-548
Cow position:
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 44

Conread position: 153-548
Cow position:
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 81

Conread position: 153-548
Cow position:
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 81

Conread position: 153-549
Cow position:
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 15

Conread position: 154-548
Cow position:
Alignm length: 407
Alignm identity: 277
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 151, 80

Conread position: 154-548
Cow position:
Alignm length: 407
Alignm identity: 275
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 152, 80

Conread position: 155-548
Cow position:
Alignm length: 406
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 79

Conread position: 155-548
Cow position:
Alignm length: 405
Alignm identity: 273
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 151, 80

Conread position: 156-493
Cow position:
Alignm length: 348
Alignm identity: 222
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 78

Conread position: 158-546
Cow position:
Alignm length: 404
Alignm identity: 270
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 178, 18

Conread position: 159-548
Cow position:
Alignm length: 399
Alignm identity: 234
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 147, 75

Conread position: 159-548
Cow position:
Alignm length: 399
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 76

Conread position: 159-548
Cow position:
Alignm length: 401
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 75

Conread position: 160-548
Cow position:
Alignm length: 395
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 72

Conread position: 165-548
Cow position:
Alignm length: 395
Alignm identity: 273
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 141, 69

Conread position: 178-454
Cow position:
Alignm length: 283
Alignm identity: 192
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 184, 56

Conread position: 205-546
Cow position:
Alignm length: 352
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 30

Conread position: 209-476
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 97, 26

Conread position: 248-548
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 176, 58

Conread position: 249-548
Cow position:
Alignm length: 309
Alignm identity: 204
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 57, 129

Conread position: 250-546
Cow position:
Alignm length: 308
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 40

Show alignments to all cow chromosomes.