Cow genome map

Conread name: Ova1-OVRM10122D05

Conread position: 1-233
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 1-304
Cow position:
Alignm length: 314
Alignm identity: 215
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 243

Conread position: 1-420
Cow position:
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 194

Conread position: 1-457
Cow position:
Alignm length: 489
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 98

Conread position: 1-473
Cow position:
Alignm length: 505
Alignm identity: 332
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 255

Conread position: 1-497
Cow position:
Alignm length: 523
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 243

Conread position: 1-545
Cow position:
Alignm length: 579
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 256

Conread position: 1-546
Cow position:
Alignm length: 581
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-547
Cow position:
Alignm length: 564
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 89

Conread position: 1-548
Cow position:
Alignm length: 578
Alignm identity: 379
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 26, 13

Conread position: 1-548
Cow position:
Alignm length: 562
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 165

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 380
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 45

Conread position: 1-548
Cow position:
Alignm length: 578
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 274

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 52

Conread position: 1-548
Cow position:
Alignm length: 581
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 30

Conread position: 1-548
Cow position:
Alignm length: 580
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 24

Conread position: 1-548
Cow position:
Alignm length: 586
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 208

Conread position: 1-548
Cow position:
Alignm length: 581
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 1-548
Cow position:
Alignm length: 581
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 254

Conread position: 1-548
Cow position:
Alignm length: 583
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 1-548
Cow position:
Alignm length: 578
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 251

Conread position: 1-548
Cow position:
Alignm length: 581
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 254

Conread position: 1-548
Cow position:
Alignm length: 576
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 57

Conread position: 1-548
Cow position:
Alignm length: 586
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 259

Conread position: 1-548
Cow position:
Alignm length: 571
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 244

Conread position: 1-548
Cow position:
Alignm length: 575
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 48

Conread position: 1-548
Cow position:
Alignm length: 581
Alignm identity: 382
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 252

Conread position: 1-548
Cow position:
Alignm length: 580
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 252

Conread position: 1-548
Cow position:
Alignm length: 584
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 256

Conread position: 1-548
Cow position:
Alignm length: 575
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 250

Conread position: 1-549
Cow position:
Alignm length: 578
Alignm identity: 373
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 33, 83

Conread position: 1-575
Cow position:
Alignm length: 593
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 241

Conread position: 2-386
Cow position:
Alignm length: 414
Alignm identity: 281
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 83

Conread position: 2-476
Cow position:
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 115

Conread position: 4-548
Cow position:
Alignm length: 575
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 250

Conread position: 5-548
Cow position:
Alignm length: 563
Alignm identity: 376
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 28, 82

Conread position: 6-528
Cow position:
Alignm length: 547
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 240

Conread position: 8-492
Cow position:
Alignm length: 516
Alignm identity: 349
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 62

Conread position: 10-536
Cow position:
Alignm length: 554
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 244

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 10-548
Cow position:
Alignm length: 573
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 247

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-548
Cow position:
Alignm length: 573
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 16

Conread position: 10-548
Cow position:
Alignm length: 572
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 247

Conread position: 10-548
Cow position:
Alignm length: 574
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 249

Conread position: 10-580
Cow position:
Alignm length: 597
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 104

Conread position: 11-544
Cow position:
Alignm length: 563
Alignm identity: 362
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 183

Conread position: 11-548
Cow position:
Alignm length: 568
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 31

Conread position: 17-548
Cow position:
Alignm length: 571
Alignm identity: 367
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 66

Conread position: 19-545
Cow position:
Alignm length: 558
Alignm identity: 371
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 10, 52

Conread position: 19-548
Cow position:
Alignm length: 566
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 212

Conread position: 19-548
Cow position:
Alignm length: 558
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 239

Conread position: 22-548
Cow position:
Alignm length: 558
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 64

Conread position: 23-498
Cow position:
Alignm length: 508
Alignm identity: 335
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 11, 207

Conread position: 44-548
Cow position:
Alignm length: 535
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 211

Conread position: 62-537
Cow position:
Alignm length: 500
Alignm identity: 333
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 65, 189

Conread position: 64-533
Cow position:
Alignm length: 500
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 186

Conread position: 64-548
Cow position:
Alignm length: 514
Alignm identity: 346
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 72, 122

Conread position: 83-548
Cow position:
Alignm length: 493
Alignm identity: 327
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 51, 112

Conread position: 141-458
Cow position:
Alignm length: 331
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 89

Conread position: 141-548
Cow position:
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 50

Conread position: 141-549
Cow position:
Alignm length: 421
Alignm identity: 282
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 13, 95

Conread position: 152-439
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 154, 84

Conread position: 152-547
Cow position:
Alignm length: 411
Alignm identity: 276
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 158, 82

Conread position: 153-548
Cow position:
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 79

Conread position: 153-548
Cow position:
Alignm length: 410
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 81

Conread position: 154-548
Cow position:
Alignm length: 406
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 80

Conread position: 154-548
Cow position:
Alignm length: 405
Alignm identity: 265
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 114, 77

Conread position: 159-520
Cow position:
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 75

Conread position: 159-548
Cow position:
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 76

Conread position: 160-472
Cow position:
Alignm length: 321
Alignm identity: 210
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 141, 75

Conread position: 160-548
Cow position:
Alignm length: 395
Alignm identity: 260
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 146, 53

Conread position: 176-492
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 59

Conread position: 180-442
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 126, 55

Conread position: 189-548
Cow position:
Alignm length: 375
Alignm identity: 264
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 117, 29

Conread position: 248-500
Cow position:
Alignm length: 266
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 58, 64

Conread position: 248-545
Cow position:
Alignm length: 308
Alignm identity: 213
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 8

Conread position: 249-513
Cow position:
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 142

Show alignments to all cow chromosomes.