Cow genome map
| Conread name: | Ova1-OVRM10123A03 |
| Conread position: | 303-680 |
| Cow position: | chr1:82922904-82922543 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 24 |
| Conread position: | 310-680 |
| Cow position: | chr1:7409143-7408770 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 310-680 |
| Cow position: | chr1:65387566-65387932 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 327-680 |
| Cow position: | chr1:17940503-17940150 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 69 |
| Conread position: | 327-680 |
| Cow position: | chr1:57423563-57423212 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 63 |
| Conread position: | 333-532 |
| Cow position: | chr1:29608006-29607805 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 333-631 |
| Cow position: | chr1:55320802-55320499 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 16, 226 |
| Conread position: | 336-680 |
| Cow position: | chr1:91597438-91597091 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 9, 144 |
| Conread position: | 365-626 |
| Cow position: | chr1:67326624-67326374 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 112, 30 |
| Conread position: | 366-680 |
| Cow position: | chr1:92871230-92871545 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 92, 16 |
| Conread position: | 368-628 |
| Cow position: | chr1:78923536-78923792 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 72 |
| Conread position: | 368-668 |
| Cow position: | chr1:16216156-16215882 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 108, 89 |
| Conread position: | 369-592 |
| Cow position: | chr1:26308123-26307905 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 369-680 |
| Cow position: | chr1:33713380-33713691 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 199 |
| Conread position: | 370-680 |
| Cow position: | chr1:61590873-61590578 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 371-542 |
| Cow position: | chr1:16581211-16581045 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 371-542 |
| Cow position: | chr1:16586787-16586621 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 371-667 |
| Cow position: | chr1:70419072-70418786 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 130, 24 |
| Conread position: | 371-680 |
| Cow position: | chr1:51965589-51965894 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 91 |
| Conread position: | 371-680 |
| Cow position: | chr1:93236010-93236311 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 23 |
| Conread position: | 372-673 |
| Cow position: | chr1:13581677-13581378 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 28 |
| Conread position: | 372-680 |
| Cow position: | chr1:77923017-77923328 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 259 |
| Conread position: | 374-679 |
| Cow position: | chr1:91529334-91529040 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 375-680 |
| Cow position: | chr1:31364777-31364483 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 48 |
| Conread position: | 377-680 |
| Cow position: | chr1:7141329-7141022 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 14 |
| Conread position: | 379-587 |
| Cow position: | chr1:41288385-41288588 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 62, 56 |
| Conread position: | 382-590 |
| Cow position: | chr1:41781996-41781787 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 40, 141 |
| Conread position: | 383-631 |
| Cow position: | chr1:89733180-89732939 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 393-590 |
| Cow position: | chr1:91079555-91079364 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 162 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 70, 54 |
| Conread position: | 395-680 |
| Cow position: | chr1:99315567-99315832 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 215, 41 |
| Conread position: | 399-662 |
| Cow position: | chr1:60933093-60932835 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 8 |
| Conread position: | 410-680 |
| Cow position: | chr1:90607527-90607258 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 217 |
Show alignments to all cow chromosomes.