Cow genome map
| Conread name: | Ova1-OVRM10123A03 |
| Conread position: | 314-526 |
| Cow position: | chr11:10216216-10216012 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 316-628 |
| Cow position: | chr11:45653711-45653405 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 317-664 |
| Cow position: | chr11:44231385-44231733 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 10 |
| Conread position: | 325-680 |
| Cow position: | chr11:20733316-20732953 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 311 |
| Conread position: | 326-672 |
| Cow position: | chr11:46779922-46779582 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 17, 194 |
| Conread position: | 327-680 |
| Cow position: | chr11:4026679-4026330 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 48 |
| Conread position: | 327-680 |
| Cow position: | chr11:9156219-9155870 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 327-680 |
| Cow position: | chr11:45921677-45921327 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 135 |
| Conread position: | 339-585 |
| Cow position: | chr11:9224617-9224392 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 339-680 |
| Cow position: | chr11:66730027-66730361 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 217 |
| Conread position: | 358-628 |
| Cow position: | chr11:79093847-79093588 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 80, 100 |
| Conread position: | 366-680 |
| Cow position: | chr11:13065013-13064702 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 368-659 |
| Cow position: | chr11:28391939-28392215 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 242, 101 |
| Conread position: | 368-680 |
| Cow position: | chr11:40507128-40506838 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 372-672 |
| Cow position: | chr11:41190385-41190680 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 39, 34 |
| Conread position: | 372-672 |
| Cow position: | chr11:75554025-75553736 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 16, 133 |
| Conread position: | 372-680 |
| Cow position: | chr11:3493960-3494271 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 244 |
| Conread position: | 372-680 |
| Cow position: | chr11:49039402-49039099 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 176 |
| Conread position: | 375-553 |
| Cow position: | chr11:21890015-21889846 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 110 |
| Conread position: | 378-506 |
| Cow position: | chr11:31754513-31754640 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 378-680 |
| Cow position: | chr11:21849535-21849244 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 235, 27 |
| Conread position: | 381-680 |
| Cow position: | chr11:2727718-2728007 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 95, 14 |
| Conread position: | 382-671 |
| Cow position: | chr11:42311455-42311172 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 120, 54 |
| Conread position: | 382-680 |
| Cow position: | chr11:1489183-1488890 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 175 |
| Conread position: | 382-680 |
| Cow position: | chr11:27669005-27668713 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 50 |
| Conread position: | 385-680 |
| Cow position: | chr11:29231996-29231698 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 14, 199 |
| Conread position: | 399-603 |
| Cow position: | chr11:21928197-21927990 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 70, 171 |
| Conread position: | 411-598 |
| Cow position: | chr11:32400967-32401152 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 127 |
| Conread position: | 421-680 |
| Cow position: | chr11:9302416-9302151 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 213 |
| Conread position: | 506-680 |
| Cow position: | chr11:3226710-3226879 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 105, 37 |
Show alignments to all cow chromosomes.