Cow genome map
| Conread name: | Ova1-OVRM10123A03 |
| Conread position: | 304-680 |
| Cow position: | chr15:6383301-6382939 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 130, 26 |
| Conread position: | 309-680 |
| Cow position: | chr15:4766040-4766413 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 130 |
| Conread position: | 324-680 |
| Cow position: | chr15:6079622-6079965 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 246, 18 |
| Conread position: | 325-628 |
| Cow position: | chr15:35646804-35646509 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 327-677 |
| Cow position: | chr15:9003339-9003004 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 327-680 |
| Cow position: | chr15:4672314-4672656 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 327-680 |
| Cow position: | chr15:7545721-7546094 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 48, 86 |
| Conread position: | 330-478 |
| Cow position: | chr15:5952273-5952125 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-680 |
| Cow position: | chr15:2412570-2412233 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 114 |
| Conread position: | 336-596 |
| Cow position: | chr15:6067301-6067047 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 341-680 |
| Cow position: | chr15:4726093-4726424 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 41 |
| Conread position: | 342-632 |
| Cow position: | chr15:4823344-4823635 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 128 |
| Conread position: | 350-680 |
| Cow position: | chr15:6485476-6485801 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 112 |
| Conread position: | 365-637 |
| Cow position: | chr15:40386807-40387071 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 144, 76 |
| Conread position: | 365-677 |
| Cow position: | chr15:17036751-17036438 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 86, 23 |
| Conread position: | 365-680 |
| Cow position: | chr15:18331922-18331611 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 41 |
| Conread position: | 368-533 |
| Cow position: | chr15:13390925-13390766 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 368-598 |
| Cow position: | chr15:41358079-41358299 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 368-680 |
| Cow position: | chr15:7965045-7964725 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 370-680 |
| Cow position: | chr15:17149044-17149335 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 371-680 |
| Cow position: | chr15:4927283-4927592 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 110, 86 |
| Conread position: | 371-680 |
| Cow position: | chr15:11293518-11293214 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 372-679 |
| Cow position: | chr15:3182150-3181846 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 104, 19 |
| Conread position: | 372-680 |
| Cow position: | chr15:4108394-4108086 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 55 |
| Conread position: | 378-562 |
| Cow position: | chr15:50253753-50253939 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 84, 171 |
| Conread position: | 378-624 |
| Cow position: | chr15:13074940-13075175 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 230, 48 |
| Conread position: | 379-680 |
| Cow position: | chr15:26156763-26157055 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 65 |
| Conread position: | 382-607 |
| Cow position: | chr15:580356-580579 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 126, 76 |
| Conread position: | 382-680 |
| Cow position: | chr15:16287018-16286724 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 127, 79 |
| Conread position: | 397-602 |
| Cow position: | chr15:24216934-24216726 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 401-680 |
| Cow position: | chr15:34366735-34366465 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 134, 78 |
| Conread position: | 416-680 |
| Cow position: | chr15:44302136-44301884 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 31 |
Show alignments to all cow chromosomes.