Cow genome map
| Conread name: | Ova1-OVRM10123A03 |
| Conread position: | 310-677 |
| Cow position: | chr6:15278651-15278280 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 323-680 |
| Cow position: | chr6:40553389-40553043 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 59 |
| Conread position: | 327-550 |
| Cow position: | chr6:58027864-58028081 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 104 |
| Conread position: | 327-598 |
| Cow position: | chr6:64717212-64717480 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 327-672 |
| Cow position: | chr6:15139985-15139644 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 58 |
| Conread position: | 327-680 |
| Cow position: | chr6:50416-50068 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 55 |
| Conread position: | 327-680 |
| Cow position: | chr6:55542074-55541718 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 335-606 |
| Cow position: | chr6:41190496-41190760 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 235, 47 |
| Conread position: | 339-628 |
| Cow position: | chr6:66193323-66193037 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 202, 108 |
| Conread position: | 362-568 |
| Cow position: | chr6:64790550-64790756 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 190, 196 |
| Conread position: | 364-553 |
| Cow position: | chr6:30677063-30676882 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 371-515 |
| Cow position: | chr6:87872-88014 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 371-632 |
| Cow position: | chr6:33899020-33898775 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 234, 65 |
| Conread position: | 371-680 |
| Cow position: | chr6:10632776-10633080 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 371-680 |
| Cow position: | chr6:44001901-44002209 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 239 |
| Conread position: | 372-564 |
| Cow position: | chr6:34196609-34196801 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 372-617 |
| Cow position: | chr6:13105290-13105540 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 9, 216 |
| Conread position: | 372-680 |
| Cow position: | chr6:15478404-15478708 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 375-680 |
| Cow position: | chr6:28170141-28170445 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 176, 16 |
| Conread position: | 376-677 |
| Cow position: | chr6:9843150-9843451 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 64, 191 |
| Conread position: | 379-667 |
| Cow position: | chr6:50529714-50529978 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 379-680 |
| Cow position: | chr6:43792331-43792031 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 248 |
| Conread position: | 380-525 |
| Cow position: | chr6:13316227-13316082 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 6, 80 |
| Conread position: | 381-680 |
| Cow position: | chr6:28104620-28104325 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 383-680 |
| Cow position: | chr6:20648843-20648559 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 82, 46 |
| Conread position: | 384-628 |
| Cow position: | chr6:15891950-15891708 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 218, 49 |
Show alignments to all cow chromosomes.