Cow genome map
| Conread name: | Ova1-OVRM10123A03 |
| Conread position: | 310-680 |
| Cow position: | chr9:10937689-10938059 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 316-595 |
| Cow position: | chr9:3543987-3544269 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 22 |
| Conread position: | 319-650 |
| Cow position: | chr9:3168029-3168345 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 324-629 |
| Cow position: | chr9:4836225-4835926 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 114 |
| Conread position: | 324-675 |
| Cow position: | chr9:9562928-9562588 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 64 |
| Conread position: | 327-501 |
| Cow position: | chr9:26736872-26737044 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 327-680 |
| Cow position: | chr9:22654695-22655046 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 55 |
| Conread position: | 332-489 |
| Cow position: | chr9:29329753-29329909 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 114 |
| Conread position: | 333-680 |
| Cow position: | chr9:25188219-25188557 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 357-680 |
| Cow position: | chr9:30488748-30489060 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 253, 104 |
| Conread position: | 365-680 |
| Cow position: | chr9:28022960-28023267 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 22 |
| Conread position: | 367-680 |
| Cow position: | chr9:3727757-3728052 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 15 |
| Conread position: | 368-631 |
| Cow position: | chr9:20176555-20176289 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 83 |
| Conread position: | 368-677 |
| Cow position: | chr9:6977489-6977782 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 368-680 |
| Cow position: | chr9:3224475-3224174 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 202, 56 |
| Conread position: | 370-680 |
| Cow position: | chr9:650868-650558 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 127 |
| Conread position: | 371-664 |
| Cow position: | chr9:59481637-59481347 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 24 |
| Conread position: | 372-679 |
| Cow position: | chr9:1981429-1981726 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 372-679 |
| Cow position: | chr9:17063227-17062918 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 93 |
| Conread position: | 372-680 |
| Cow position: | chr9:2172109-2172409 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 79, 88 |
| Conread position: | 372-680 |
| Cow position: | chr9:49303504-49303210 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 80, 144 |
| Conread position: | 372-680 |
| Cow position: | chr9:59537255-59537567 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 257 |
| Conread position: | 373-622 |
| Cow position: | chr9:52292580-52292823 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 125, 15 |
| Conread position: | 373-680 |
| Cow position: | chr9:24980764-24980472 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 377-680 |
| Cow position: | chr9:54925706-54926003 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 378-680 |
| Cow position: | chr9:22192447-22192741 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 379-624 |
| Cow position: | chr9:30191213-30190974 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 187, 58 |
| Conread position: | 380-636 |
| Cow position: | chr9:42185948-42185702 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 227, 148 |
Show alignments to all cow chromosomes.