Cow genome map
| Conread name: | Ova1-OVRM10123A03 |
| Conread position: | 310-680 |
| Cow position: | chrX:3374908-3374535 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 310-680 |
| Cow position: | chrX:16362122-16361746 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 7, 14 |
| Conread position: | 323-635 |
| Cow position: | chrX:41887979-41887680 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 105 |
| Conread position: | 326-680 |
| Cow position: | chrX:15486750-15486412 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 244, 109 |
| Conread position: | 327-673 |
| Cow position: | chrX:26426557-26426225 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 55 |
| Conread position: | 332-680 |
| Cow position: | chrX:20798341-20798677 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 333-601 |
| Cow position: | chrX:13182106-13181856 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 115 |
| Conread position: | 336-680 |
| Cow position: | chrX:30170810-30170476 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 14, 125 |
| Conread position: | 336-680 |
| Cow position: | chrX:37015148-37015490 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 37, 179 |
| Conread position: | 358-680 |
| Cow position: | chrX:24476134-24475831 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 194, 36 |
| Conread position: | 364-680 |
| Cow position: | chrX:25613117-25613421 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 135 |
| Conread position: | 369-634 |
| Cow position: | chrX:22816901-22817170 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 371-471 |
| Cow position: | chrX:10416388-10416288 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 371-515 |
| Cow position: | chrX:8574428-8574287 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 372-680 |
| Cow position: | chrX:27986762-27986457 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 11, 65 |
| Conread position: | 373-597 |
| Cow position: | chrX:7541262-7541477 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 373-606 |
| Cow position: | chrX:3626532-3626754 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 373-616 |
| Cow position: | chrX:3621376-3621621 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 374-591 |
| Cow position: | chrX:24523820-24524047 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 177 |
| Conread position: | 374-594 |
| Cow position: | chrX:26578736-26578958 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 374-628 |
| Cow position: | chrX:26773225-26772971 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 26, 184 |
| Conread position: | 375-629 |
| Cow position: | chrX:18242227-18242477 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 375-680 |
| Cow position: | chrX:12481069-12481371 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 16 |
| Conread position: | 376-677 |
| Cow position: | chrX:19725922-19725624 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 183 |
| Conread position: | 379-660 |
| Cow position: | chrX:24134184-24133916 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 173, 57 |
| Conread position: | 379-672 |
| Cow position: | chrX:15308864-15308572 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 379-680 |
| Cow position: | chrX:25465000-25465287 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 231, 94 |
| Conread position: | 380-572 |
| Cow position: | chrX:18553504-18553690 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 52 |
| Conread position: | 380-680 |
| Cow position: | chrX:23072245-23072535 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 80, 34 |
| Conread position: | 382-680 |
| Cow position: | chrX:21059858-21060140 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 165, 26 |
| Conread position: | 382-680 |
| Cow position: | chrX:23454940-23454645 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 13 |
| Conread position: | 382-680 |
| Cow position: | chrX:28868168-28867876 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 122 |
| Conread position: | 382-680 |
| Cow position: | chrX:38236489-38236202 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 234, 80 |
| Conread position: | 383-680 |
| Cow position: | chrX:23020379-23020669 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 227, 19 |
| Conread position: | 423-672 |
| Cow position: | chrX:2144084-2144336 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 36, 155 |
Show alignments to all cow chromosomes.